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CDO 1.9.1 building error

Added by Kostas S over 6 years ago

Dear all
I'm using cdo 1.8.2rc1. CDO installation includes the following features:

limate Data Operators version 1.8.2rc1 (http://mpimet.mpg.de/cdo)
Compiled: by kostas on grid-master.hydromech.tuc.gr (x86_64-unknown-linux-gnu) May 15 2017 16:50:04
Compiler: mpicc -std=gnu99 -O2 -fPIC -fopenmp
version: unknown
Features: DATA PTHREADS OpenMP3 HDF5 NC4/HDF5 OPeNDAP SZ UDUNITS2 PROJ.4 XML2 CURL FFTW3 SSE2
Libraries: HDF5/1.8.18 proj/4.93 xml2/2.9.1 curl/7.29.0
Filetypes: srv ext ieg grb1 grb2 nc1 nc2 nc4 nc4c
CDI library version : 1.8.2 of May 15 2017 16:46:58
CGRIBEX library version : 1.7.6 of Dec 20 2016 19:55:24
GRIB_API library version : 1.21.0
NetCDF library version : 4.4.1.1 of May 15 2017 13:06:41 $
HDF5 library version : 1.8.18
SERVICE library version : 1.4.0 of May 15 2017 16:46:47
EXTRA library version : 1.4.0 of May 15 2017 16:46:42
IEG library version : 1.4.0 of May 15 2017 16:46:45
FILE library version : 1.8.3 of May 15 2017 16:46:42

Currently, i'm trying to upgrade to cdo 1.9.1 but i got an unexpected error. CDO seemed to configure successfully, but libcdi not. I got this error:

checking szlib.h usability... yes
checking szlib.h presence... yes
checking for szlib.h... yes
checking for library containing SZ_BufftoBuffCompress... -lsz
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for library containing nc_open... no
configure: error: Could not link to NetCDF library
configure: error: ./configure failed for libcdi

That's strange, because the previous installation of cdo 1.8.2rc1 was compiled successfully. Also cdo 1.9.1 configured successfully but not the integrated libcdi? netcdf 4.4.1.1 is installed and i would prefer not to change it to 4.5. are there any compatibility issues with 4.4.1.1 version?

I would appreciate any help :)

Kostas