error creating nc4 w/zip compression, due to bug in dimension error checking
Added by Etienne Tourigny about 13 years ago
Greetings,
when trying to create a NC4 zip compressed file, I get the following error:
Warning (cdfDefVar) : Deflate compression is only available for netCDF4!
I traced the error to the following line in libcdi/src/stream_cdf.c
if ( streamptr->comptype == COMPRESS_ZIP ) { if ( lchunk && (streamptr->filetype == FILETYPE_NC4 || streamptr->filetype == FILETYPE_NC4C) )
The problem is that lchunk is set to FALSE in the following statement (dimension checking).
By commenting this line, I am able to create a compressed file that seems valid, so what is the deal?
if ( dimorder[0] == 3 ) lchunk = FALSE; /\* ZYX and ZXY *\
The file (created by cdo) has dimensions (time,latitude,longitude), and the computed dimorder values are [3,2,1].
I can create the file as type NC or type NC4 (uncompressed) without any problems.
netcdf trmm-nc { dimensions: longitude = 40 ; latitude = 40 ; time = UNLIMITED ; // (1 currently) variables: double longitude(longitude) ; longitude:standard_name = "longitude" ; longitude:long_name = "Longitude" ; longitude:units = "degrees_east" ; longitude:axis = "X" ; double latitude(latitude) ; latitude:standard_name = "latitude" ; latitude:long_name = "Latitude" ; latitude:units = "degrees_north" ; latitude:axis = "Y" ; double time(time) ; time:standard_name = "time" ; time:units = "hours since 2011-01-01 00:00:00" ; time:calendar = "standard" ; float pcp(time, latitude, longitude) ; ..
Regards,
Etienne
trmm.nc (8.75 KB) trmm.nc | original file | ||
trmm-nc4-zip.nc (18.8 KB) trmm-nc4-zip.nc | file created after the fix | ||
trmm-nc4-nozip.nc (20.2 KB) trmm-nc4-nozip.nc | file created before the fix (with warning) |
Replies (2)
RE: error creating nc4 w/zip compression, due to bug in dimension error checking - Added by Uwe Schulzweida about 13 years ago
Hi Etienne,
thanks for this report! This bug was introduced in CDO version 1.5.2 and is already fixed (#1497) for the next release.
Best regards,
Uwe
RE: error creating nc4 w/zip compression, due to bug in dimension error checking - Added by Etienne Tourigny about 13 years ago
Uwe,
sorry I missed the bug report and thanks for fixing it!
Etienne