CNRM-CERFACS-CNRM-CM5 netcdf files

Added by Beata Szabo-Takacs over 9 years ago

Hi,

When I use any output of CNRM-CERFACS-CNRM-CM5 model in CDO I got an unknown error message. Could someone explain me what should be the matter?

Thank you for your help in advance!

Replies (7)

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Matt Thompson over 9 years ago

Can you share the error message? Or perhaps the location of a sample file?

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Beata Szabo-Takacs over 9 years ago

Dear Matthew,

Thank you for your response! The error message is the following:

cdo sinfo: Open failed on
    >pr_EUR-11_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_day_19710101-19751231.nc<
  Unknown Error

I cannot upload a sample file because its size larger than 50 MB, but I can send you a sample file to your email adress by filesender. Would it be appropriate for you?

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Uwe Schulzweida over 9 years ago

Dear Beata,

Try the NCO tool ncks to select only a few time steps of your netCDF file, here is an example:

ncks -d time,0,3 ifile ofile

If you can reproduce this CDO problem on the result of the above command then please upload this smaller file.

Cheers, Uwe

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Beata Szabo-Takacs over 9 years ago

Dear Uwe,

Thank you very much for your help. I could create a smaller file by your suggestion. I uploaded the sample file.

Cheers, Beata

sample.nc (2.5 MB) sample.nc

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Uwe Schulzweida over 9 years ago

Thanks! Unfortunately I can't reproduce this problem with CDO version 1.6.4 and 1.6.9. Can you reproduce this problem with the small file?

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Beata Szabo-Takacs over 9 years ago

Yes, unfortunately I got the same problem with the smaller file too:

cdo sinfo: Open failed on >sample.nc<
    Unknown Error

My cdo version is

Climate Data Operators version 1.6.4 (http://code.zmaw.de/projects/cdo)
 Compiled: by beata on beata-HP-Z420-Workstation (x86_64-unknown-linux-gnu) Jul  8 2015 10:18:15
 Compiler: gcc -std=gnu99 -g -O2 -fopenmp 
 version: gcc (Ubuntu 4.8.2-19ubuntu1) 4.8.2
Features: PTHREADS OpenMP NC4 Z JASPER
Libraries:
Filetypes: srv ext ieg grb grb2 nc nc2 nc4 nc4c 
     CDI library version : 1.6.4 of Jul  8 2015 10:18:09
 CGRIBEX library version : 1.6.4 of Jun 27 2014 14:00:04
GRIB_API library version : 1.10.4
  netCDF library version : 4.3.3.1 of Jul 20 2015 08:28:32 $
    HDF5 library version : 1.8.11
 SERVICE library version : 1.3.2 of Jul  8 2015 10:17:58
   EXTRA library version : 1.3.2 of Jul  8 2015 10:17:53
     IEG library version : 1.3.2 of Jul  8 2015 10:17:56
    FILE library version : 1.8.2 of Jul  8 2015 10:17:54

RE: CNRM-CERFACS-CNRM-CM5 netcdf files - Added by Beata Szabo-Takacs over 9 years ago

Dear Uwe and Matthew,

I could solve the matter. It was not caused by CDO. Some weeks ago I installed hdf5-1.8.15-patch1.gz and netcdf-4.3.3.1.gz for Java application. However these libraries were installed another directory than the libraries for CDO, but they caused trouble. I uninstalled them so the CDO already works with CNRM-CERFACS-CNRM netcdf files.

Many thanks for your responses again!

Cheers,
Beata

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