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HDF error trying to concatenate .nc files after install on Mac

Added by John Kramer over 4 years ago

Hi! I just installed the CDO package on my Mac and am trying to concatenate multiple .nc files into one. I tried running this code:

cdo cat *.nc outfile

and it resulted in this error message:

Error (cdf_inq_dimlen): NetCDF: Invalid dimension ID or name
HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0:
#000: H5T.c line 1754 in H5Tclose(): not a datatype
major: Invalid arguments to routine
minor: Inappropriate type

Error (cdf_close): NetCDF: HDF error

Is this something anyone can help me with? Or does anyone know a better/easier way to combine multiple NetCDF files?

Thank you!


Replies (1)

RE: HDF error trying to concatenate .nc files after install on Mac - Added by Ralf Mueller over 4 years ago

hi John!

  1. how did you install it?
  2. which version, you might post what is printed py cdo -V
  3. the error seem to be data-related. An upload of the files, or a single timestep of them would be helpful

cheers
ralf

    (1-1/1)