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RE: Installation with netcdf capabilities issue » config.log

Juan José Gómez Navarro, 2010-10-06 18:09

 
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 1.4.6, which was
generated by GNU Autoconf 2.66. Invocation command line was

$ ./configure --with-netcdf=/Users/navarro/Software/netcdf

## --------- ##
## Platform. ##
## --------- ##

hostname = eduroam_um-230-85.inf.um.es
uname -m = i386
uname -r = 9.8.0
uname -s = Darwin
uname -v = Darwin Kernel Version 9.8.0: Wed Jul 15 16:55:01 PDT 2009; root:xnu-1228.15.4~1/RELEASE_I386

/usr/bin/uname -p = i386
/bin/uname -X = unknown

/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 9.8.0: Wed Jul 15 16:55:01 PDT 2009; root:xnu-1228.15.4~1/RELEASE_I386
Kernel configured for up to 2 processors.
2 processors are physically available.
2 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1
Primary memory available: 2.00 gigabytes
Default processor set: 55 tasks, 214 threads, 2 processors
Load average: 0.42, Mach factor: 1.56
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown

PATH: /opt/local/bin
PATH: /opt/local/sbin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/bin
PATH: /usr/texbin
PATH: /usr/X11/bin
PATH: /Users/navarro/Software/cdo-1.4.0/src
PATH: /Users/navarro/Software/pingo_1.6/bin
PATH: /sw/bin
PATH: /Users/navarro/Software/grads-2.0.a7.1/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2477: checking build system type
configure:2491: result: i386-apple-darwin9.8.0
configure:2511: checking host system type
configure:2524: result: i386-apple-darwin9.8.0
configure:2562: checking for a BSD-compatible install
configure:2630: result: /usr/bin/install -c
configure:2641: checking whether build environment is sane
configure:2691: result: yes
configure:2832: checking for a thread-safe mkdir -p
configure:2871: result: config/install-sh -c -d
configure:2884: checking for gawk
configure:2914: result: no
configure:2884: checking for mawk
configure:2914: result: no
configure:2884: checking for nawk
configure:2914: result: no
configure:2884: checking for awk
configure:2900: found /usr/bin/awk
configure:2911: result: awk
configure:2922: checking whether make sets $(MAKE)
configure:2944: result: yes
configure:3028: setting up libtool
configure:3076: checking how to print strings
configure:3103: result: printf
configure:3136: checking for style of include used by make
configure:3164: result: GNU
configure:3234: checking for gcc
configure:3250: found /usr/bin/gcc
configure:3261: result: gcc
configure:3490: checking for C compiler version
configure:3499: gcc --version >&5
i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)
Copyright (C) 2005 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3510: $? = 0
configure:3499: gcc -v >&5
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5465~16/src/configure --disable-checking -enable-werror --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic --host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5465)
configure:3510: $? = 0
configure:3499: gcc -V >&5
gcc-4.0: argument to `-V' is missing
configure:3510: $? = 1
configure:3499: gcc -qversion >&5
i686-apple-darwin9-gcc-4.0.1: no input files
configure:3510: $? = 1
configure:3530: checking whether the C compiler works
configure:3552: gcc conftest.c >&5
configure:3556: $? = 0
configure:3604: result: yes
configure:3607: checking for C compiler default output file name
configure:3609: result: a.out
configure:3615: checking for suffix of executables
configure:3622: gcc -o conftest conftest.c >&5
configure:3626: $? = 0
configure:3648: result:
configure:3670: checking whether we are cross compiling
configure:3678: gcc -o conftest conftest.c >&5
configure:3682: $? = 0
configure:3689: ./conftest
configure:3693: $? = 0
configure:3708: result: no
configure:3713: checking for suffix of object files
configure:3735: gcc -c conftest.c >&5
configure:3739: $? = 0
configure:3760: result: o
configure:3764: checking whether we are using the GNU C compiler
configure:3783: gcc -c conftest.c >&5
configure:3783: $? = 0
configure:3792: result: yes
configure:3801: checking whether gcc accepts -g
configure:3821: gcc -c -g conftest.c >&5
configure:3821: $? = 0
configure:3862: result: yes
configure:3879: checking for gcc option to accept ISO C89
configure:3943: gcc -c -g -O2 conftest.c >&5
configure:3943: $? = 0
configure:3956: result: none needed
configure:3978: checking dependency style of gcc
configure:4088: result: gcc3
configure:4103: checking for a sed that does not truncate output
configure:4167: result: /usr/bin/sed
configure:4185: checking for grep that handles long lines and -e
configure:4243: result: /usr/bin/grep
configure:4248: checking for egrep
configure:4310: result: /usr/bin/grep -E
configure:4315: checking for fgrep
configure:4377: result: /usr/bin/grep -F
configure:4412: checking for ld used by gcc
configure:4479: result: /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
configure:4486: checking if the linker (/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld) is GNU ld
configure:4501: result: no
configure:4513: checking for BSD- or MS-compatible name lister (nm)
configure:4562: result: /usr/bin/nm -p
configure:4692: checking the name lister (/usr/bin/nm -p) interface
configure:4699: gcc -c -g -O2 conftest.c >&5
configure:4702: /usr/bin/nm -p "conftest.o"
configure:4705: output
00000168 D _some_variable
configure:4712: result: BSD nm
configure:4715: checking whether ln -s works
configure:4719: result: yes
configure:4727: checking the maximum length of command line arguments
configure:4852: result: 196608
configure:4869: checking whether the shell understands some XSI constructs
configure:4879: result: yes
configure:4883: checking whether the shell understands "+="
configure:4889: result: yes
configure:4924: checking for /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld option to reload object files
configure:4931: result: -r
configure:5000: checking for objdump
configure:5030: result: no
configure:5059: checking how to recognize dependent libraries
configure:5261: result: pass_all
configure:5321: checking for ar
configure:5337: found /usr/bin/ar
configure:5348: result: ar
configure:5426: checking for strip
configure:5442: found /usr/bin/strip
configure:5453: result: strip
configure:5525: checking for ranlib
configure:5541: found /usr/bin/ranlib
configure:5552: result: ranlib
configure:5654: checking command to parse /usr/bin/nm -p output from gcc object
configure:5772: gcc -c -g -O2 conftest.c >&5
configure:5775: $? = 0
configure:5779: /usr/bin/nm -p conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:5782: $? = 0
cannot find nm_test_var in conftest.nm
configure:5772: gcc -c -g -O2 conftest.c >&5
configure:5775: $? = 0
configure:5779: /usr/bin/nm -p conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:5782: $? = 0
configure:5836: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
configure:5839: $? = 0
configure:5877: result: ok
configure:6142: checking for dsymutil
configure:6158: found /usr/bin/dsymutil
configure:6169: result: dsymutil
configure:6234: checking for nmedit
configure:6250: found /usr/bin/nmedit
configure:6261: result: nmedit
configure:6326: checking for lipo
configure:6342: found /usr/bin/lipo
configure:6353: result: lipo
configure:6418: checking for otool
configure:6434: found /usr/bin/otool
configure:6445: result: otool
configure:6510: checking for otool64
configure:6540: result: no
configure:6585: checking for -single_module linker flag
gcc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:6612: result: yes
configure:6614: checking for -exported_symbols_list linker flag
configure:6634: gcc -o conftest -g -O2 -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:6634: $? = 0
configure:6644: result: yes
configure:6646: checking for -force_load linker flag
gcc -g -O2 -c -o conftest.o conftest.c
ar cru libconftest.a conftest.o
ranlib libconftest.a
gcc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a
ld: unknown option: -force_load
collect2: ld returned 1 exit status
configure:6676: result: no
configure:6718: checking how to run the C preprocessor
configure:6749: gcc -E conftest.c
configure:6749: $? = 0
configure:6763: gcc -E conftest.c
conftest.c:11:28: error: ac_nonexistent.h: No such file or directory
configure:6763: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6788: result: gcc -E
configure:6808: gcc -E conftest.c
configure:6808: $? = 0
configure:6822: gcc -E conftest.c
conftest.c:11:28: error: ac_nonexistent.h: No such file or directory
configure:6822: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6851: checking for ANSI C header files
configure:6871: gcc -c -g -O2 conftest.c >&5
configure:6871: $? = 0
configure:6944: gcc -o conftest -g -O2 conftest.c >&5
configure:6944: $? = 0
configure:6944: ./conftest
configure:6944: $? = 0
configure:6955: result: yes
configure:6968: checking for sys/types.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for sys/stat.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for stdlib.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for string.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for memory.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for strings.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for inttypes.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for stdint.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6968: checking for unistd.h
configure:6968: gcc -c -g -O2 conftest.c >&5
configure:6968: $? = 0
configure:6968: result: yes
configure:6982: checking for dlfcn.h
configure:6982: gcc -c -g -O2 conftest.c >&5
configure:6982: $? = 0
configure:6982: result: yes
configure:7169: checking for objdir
configure:7184: result: .libs
configure:7455: checking if gcc supports -fno-rtti -fno-exceptions
configure:7473: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C
configure:7477: $? = 0
configure:7490: result: no
configure:7510: checking for gcc option to produce PIC
configure:7795: result: -fno-common -DPIC
configure:7807: checking if gcc PIC flag -fno-common -DPIC works
configure:7825: gcc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5
configure:7829: $? = 0
configure:7842: result: yes
configure:7866: checking if gcc static flag -static works
configure:7894: result: no
configure:7909: checking if gcc supports -c -o file.o
configure:7930: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:7934: $? = 0
configure:7956: result: yes
configure:7964: checking if gcc supports -c -o file.o
configure:8011: result: yes
configure:8044: checking whether the gcc linker (/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:9119: result: yes
configure:9364: checking dynamic linker characteristics
configure:10041: result: darwin9.8.0 dyld
configure:10148: checking how to hardcode library paths into programs
configure:10173: result: immediate
configure:10713: checking whether stripping libraries is possible
configure:10727: result: yes
configure:10753: checking if libtool supports shared libraries
configure:10755: result: yes
configure:10758: checking whether to build shared libraries
configure:10779: result: yes
configure:10782: checking whether to build static libraries
configure:10786: result: yes
configure:10865: checking for gcc
configure:10892: result: gcc
configure:10914: checking for gcc option to accept ISO C99
configure:11063: gcc -c -g -O2 conftest.c >&5
conftest.c:73: error: syntax error before 'text'
conftest.c: In function 'test_restrict':
conftest.c:78: error: 'for' loop initial declaration used outside C99 mode
conftest.c:78: error: 'text' undeclared (first use in this function)
conftest.c:78: error: (Each undeclared identifier is reported only once
conftest.c:78: error: for each function it appears in.)
conftest.c: In function 'main':
conftest.c:127: error: nested functions are disabled, use -fnested-functions to re-enable
conftest.c:127: error: syntax error before 'newvar'
conftest.c:137: error: 'for' loop initial declaration used outside C99 mode
conftest.c:153: error: 'newvar' undeclared (first use in this function)
configure:11063: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <stdarg.h>
| #include <stdbool.h>
| #include <stdlib.h>
| #include <wchar.h>
| #include <stdio.h>
|
| // Check varargs macros. These examples are taken from C99 6.10.3.5.
| #define debug(...) fprintf (stderr, __VA_ARGS__)
| #define showlist(...) puts (#__VA_ARGS__)
| #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__))
| static void
| test_varargs_macros (void)
| {
| int x = 1234;
| int y = 5678;
| debug ("Flag");
| debug ("X = %d\n", x);
| showlist (The first, second, and third items.);
| report (x>y, "x is %d but y is %d", x, y);
| }
|
| // Check long long types.
| #define BIG64 18446744073709551615ull
| #define BIG32 4294967295ul
| #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0)
| #if !BIG_OK
| your preprocessor is broken;
| #endif
| #if BIG_OK
| #else
| your preprocessor is broken;
| #endif
| static long long int bignum = -9223372036854775807LL;
| static unsigned long long int ubignum = BIG64;
|
| struct incomplete_array
| {
| int datasize;
| double data[];
| };
|
| struct named_init {
| int number;
| const wchar_t *name;
| double average;
| };
|
| typedef const char *ccp;
|
| static inline int
| test_restrict (ccp restrict text)
| {
| // See if C++-style comments work.
| // Iterate through items via the restricted pointer.
| // Also check for declarations in for loops.
| for (unsigned int i = 0; *(text+i) != '\0'; ++i)
| continue;
| return 0;
| }
|
| // Check varargs and va_copy.
| static void
| test_varargs (const char *format, ...)
| {
| va_list args;
| va_start (args, format);
| va_list args_copy;
| va_copy (args_copy, args);
|
| const char *str;
| int number;
| float fnumber;
|
| while (*format)
| {
| switch (*format++)
| {
| case 's': // string
| str = va_arg (args_copy, const char *);
| break;
| case 'd': // int
| number = va_arg (args_copy, int);
| break;
| case 'f': // float
| fnumber = va_arg (args_copy, double);
| break;
| default:
| break;
| }
| }
| va_end (args_copy);
| va_end (args);
| }
|
| int
| main ()
| {
|
| // Check bool.
| _Bool success = false;
|
| // Check restrict.
| if (test_restrict ("String literal") == 0)
| success = true;
| char *restrict newvar = "Another string";
|
| // Check varargs.
| test_varargs ("s, d' f .", "string", 65, 34.234);
| test_varargs_macros ();
|
| // Check flexible array members.
| struct incomplete_array *ia =
| malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10));
| ia->datasize = 10;
| for (int i = 0; i < ia->datasize; ++i)
| ia->data[i] = i * 1.234;
|
| // Check named initializers.
| struct named_init ni = {
| .number = 34,
| .name = L"Test wide string",
| .average = 543.34343,
| };
|
| ni.number = 58;
|
| int dynamic_array[ni.number];
| dynamic_array[ni.number - 1] = 543;
|
| // work around unused variable warnings
| return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x'
| || dynamic_array[ni.number - 1] != 543);
|
| ;
| return 0;
| }
configure:11063: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:11063: $? = 0
configure:11083: result: -std=gnu99
configure:11092: checking whether gcc -std=gnu99 and cc understand -c and -o together
configure:11123: gcc -std=gnu99 -c conftest.c -o conftest2.o >&5
configure:11127: $? = 0
configure:11133: gcc -std=gnu99 -c conftest.c -o conftest2.o >&5
configure:11137: $? = 0
configure:11148: cc -c conftest.c >&5
configure:11152: $? = 0
configure:11160: cc -c conftest.c -o conftest2.o >&5
configure:11164: $? = 0
configure:11170: cc -c conftest.c -o conftest2.o >&5
configure:11174: $? = 0
configure:11192: result: yes
configure:11261: checking for ar
configure:11288: result: ar
configure:11445: checking for ld
configure:11472: result: /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
configure:11537: checking for nm
configure:11564: result: /usr/bin/nm -p
configure:11629: checking for ar
configure:11656: result: ar
configure:11721: checking for as
configure:11737: found /usr/bin/as
configure:11748: result: as
configure:11813: checking for dlltool
configure:11843: result: no
configure:11905: checking for objdump
configure:11932: result: false
configure:11997: checking for strip
configure:12024: result: strip
configure:12089: checking for ranlib
configure:12116: result: ranlib
configure:12197: checking for g++
configure:12213: found /usr/bin/g++
configure:12224: result: g++
configure:12251: checking for C++ compiler version
configure:12260: g++ --version >&5
i686-apple-darwin9-g++-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)
Copyright (C) 2005 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:12271: $? = 0
configure:12260: g++ -v >&5
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5465~16/src/configure --disable-checking -enable-werror --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic --host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5465)
configure:12271: $? = 0
configure:12260: g++ -V >&5
g++-4.0: argument to `-V' is missing
configure:12271: $? = 1
configure:12260: g++ -qversion >&5
i686-apple-darwin9-g++-4.0.1: no input files
configure:12271: $? = 1
configure:12275: checking whether we are using the GNU C++ compiler
configure:12294: g++ -c conftest.cpp >&5
configure:12294: $? = 0
configure:12303: result: yes
configure:12312: checking whether g++ accepts -g
configure:12332: g++ -c -g conftest.cpp >&5
configure:12332: $? = 0
configure:12373: result: yes
configure:12398: checking dependency style of g++
configure:12508: result: gcc3
configure:12531: checking how to run the C++ preprocessor
configure:12558: g++ -E conftest.cpp
configure:12558: $? = 0
configure:12572: g++ -E conftest.cpp
conftest.cpp:23:28: error: ac_nonexistent.h: No such file or directory
configure:12572: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:12597: result: g++ -E
configure:12617: g++ -E conftest.cpp
configure:12617: $? = 0
configure:12631: g++ -E conftest.cpp
conftest.cpp:23:28: error: ac_nonexistent.h: No such file or directory
configure:12631: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:12799: checking for ld used by g++
configure:12866: result: /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
configure:12873: checking if the linker (/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld) is GNU ld
configure:12888: result: no
configure:12943: checking whether the g++ linker (/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:13875: result: yes
configure:13903: g++ -c -g -O2 conftest.cpp >&5
configure:13906: $? = 0
configure:14088: checking for g++ option to produce PIC
configure:14410: result: -fno-common -DPIC
configure:14419: checking if g++ PIC flag -fno-common -DPIC works
configure:14437: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5
configure:14441: $? = 0
configure:14454: result: yes
configure:14475: checking if g++ static flag -static works
configure:14503: result: no
configure:14515: checking if g++ supports -c -o file.o
configure:14536: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:14540: $? = 0
configure:14562: result: yes
configure:14567: checking if g++ supports -c -o file.o
configure:14614: result: yes
configure:14644: checking whether the g++ linker (/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:14672: result: yes
configure:14815: checking dynamic linker characteristics
configure:15426: result: darwin9.8.0 dyld
configure:15479: checking how to hardcode library paths into programs
configure:15504: result: immediate
configure:15552: checking for special C compiler options needed for large files
configure:15597: result: no
configure:15603: checking for _FILE_OFFSET_BITS value needed for large files
configure:15628: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:15628: $? = 0
configure:15660: result: no
configure:15751: checking for stdlib.h
configure:15751: result: yes
configure:15751: checking for unistd.h
configure:15751: result: yes
configure:15751: checking for sys/param.h
configure:15751: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:15751: $? = 0
configure:15751: result: yes
configure:15771: checking for getpagesize
configure:15771: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
configure:15771: $? = 0
configure:15771: result: yes
configure:15780: checking for working mmap
configure:15927: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
configure:15927: $? = 0
configure:15927: ./conftest
configure:15927: $? = 0
configure:15937: result: yes
configure:15948: checking for malloc in -lmalloc
configure:15973: gcc -std=gnu99 -o conftest -g -O2 conftest.c -lmalloc >&5
conftest.c:35: warning: conflicting types for built-in function 'malloc'
ld: library not found for -lmalloc
collect2: ld returned 1 exit status
configure:15973: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char malloc ();
| int
| main ()
| {
| return malloc ();
| ;
| return 0;
| }
configure:15982: result: no
configure:15995: checking for struct stat.st_blksize
configure:15995: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:15995: $? = 0
configure:15995: result: yes
configure:16009: checking sys/resource.h usability
configure:16009: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:16009: $? = 0
configure:16009: result: yes
configure:16009: checking sys/resource.h presence
configure:16009: gcc -E conftest.c
configure:16009: $? = 0
configure:16009: result: yes
configure:16009: checking for sys/resource.h
configure:16009: result: yes
configure:16021: checking sys/times.h usability
configure:16021: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:16021: $? = 0
configure:16021: result: yes
configure:16021: checking sys/times.h presence
configure:16021: gcc -E conftest.c
configure:16021: $? = 0
configure:16021: result: yes
configure:16021: checking for sys/times.h
configure:16021: result: yes
configure:16033: checking malloc.h usability
configure:16033: gcc -std=gnu99 -c -g -O2 conftest.c >&5
conftest.c:64:20: error: malloc.h: No such file or directory
configure:16033: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <malloc.h>
configure:16033: result: no
configure:16033: checking malloc.h presence
configure:16033: gcc -E conftest.c
conftest.c:31:20: error: malloc.h: No such file or directory
configure:16033: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| /* end confdefs.h. */
| #include <malloc.h>
configure:16033: result: no
configure:16033: checking for malloc.h
configure:16033: result: no
configure:16047: checking for mallinfo
configure:16047: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
Undefined symbols:
"_mallinfo", referenced from:
_main in ccyKdUUA.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:16047: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| /* end confdefs.h. */
| /* Define mallinfo to an innocuous variant, in case <limits.h> declares mallinfo.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define mallinfo innocuous_mallinfo
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char mallinfo (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef mallinfo
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char mallinfo ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_mallinfo || defined __stub___mallinfo
| choke me
| #endif
|
| int
| main ()
| {
| return mallinfo ();
| ;
| return 0;
| }
configure:16047: result: no
configure:16060: checking for isnan
configure:16060: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
conftest.c:54: warning: conflicting types for built-in function 'isnan'
configure:16060: $? = 0
configure:16060: result: yes
configure:16071: checking for getrlimit
configure:16071: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
configure:16071: $? = 0
configure:16071: result: yes
configure:16082: checking for gethostname
configure:16082: gcc -std=gnu99 -o conftest -g -O2 conftest.c >&5
configure:16082: $? = 0
configure:16082: result: yes
configure:16156: checking for floor in -lm
configure:16181: gcc -std=gnu99 -o conftest -g -O2 conftest.c -lm >&5
conftest.c:46: warning: conflicting types for built-in function 'floor'
configure:16181: $? = 0
configure:16190: result: yes
configure:16225: checking pthread.h usability
configure:16225: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:16225: $? = 0
configure:16225: result: yes
configure:16225: checking pthread.h presence
configure:16225: gcc -E conftest.c
configure:16225: $? = 0
configure:16225: result: yes
configure:16225: checking for pthread.h
configure:16225: result: yes
configure:16235: checking for pthread_create in -lpthread
configure:16260: gcc -std=gnu99 -o conftest -g -O2 conftest.c -lpthread -lm >&5
configure:16260: $? = 0
configure:16269: result: yes
configure:16518: checking zlib.h usability
configure:16518: gcc -std=gnu99 -c -g -O2 conftest.c >&5
configure:16518: $? = 0
configure:16518: result: yes
configure:16518: checking zlib.h presence
configure:16518: gcc -E conftest.c
configure:16518: $? = 0
configure:16518: result: yes
configure:16518: checking for zlib.h
configure:16518: result: yes
configure:16528: checking for library containing deflate
configure:16559: gcc -std=gnu99 -o conftest -g -O2 conftest.c -lpthread -lm >&5
Undefined symbols:
"_deflate", referenced from:
_main in ccHimhFB.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:16559: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_ISNAN 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define COMPILER "gcc -std=gnu99 -g -O2"
| #define COMP_VERSION "i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)"
| #define USER_NAME "navarro"
| #define HOST_NAME "eduroam_um-230-85.inf.um.es"
| #define SYSTEM_TYPE "i386-apple-darwin9.8.0"
| #define HAVE_LIBM 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_ZLIB_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char deflate ();
| int
| main ()
| {
| return deflate ();
| ;
| return 0;
| }
configure:16559: gcc -std=gnu99 -o conftest -g -O2 conftest.c -lz -lpthread -lm >&5
configure:16559: $? = 0
configure:16576: result: -lz
configure:16767: checking for szlib library
configure:16769: result: suppressed
configure:17086: checking for hdf5 library
configure:17088: result: suppressed
configure:17187: checking netcdf.h usability
configure:17187: gcc -std=gnu99 -c -g -O2 -I/Users/navarro/Software/netcdf/include conftest.c >&5
configure:17187: $? = 0
configure:17187: result: yes
configure:17187: checking netcdf.h presence
configure:17187: gcc -E -I/Users/navarro/Software/netcdf/include conftest.c
configure:17187: $? = 0
configure:17187: result: yes
configure:17187: checking for netcdf.h
configure:17187: result: yes
configure:17197: checking for library containing nc_open
configure:17228: gcc -std=gnu99 -o conftest -g -O2 -I/Users/navarro/Software/netcdf/include -L/Users/navarro/Software/netcdf/lib conftest.c -lz -lpthread -lm >&5
Undefined symbols:
"_nc_open", referenced from:
_main in ccLDwPXl.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:17228: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_ISNAN 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define COMPILER "gcc -std=gnu99 -g -O2"
| #define COMP_VERSION "i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)"
| #define USER_NAME "navarro"
| #define HOST_NAME "eduroam_um-230-85.inf.um.es"
| #define SYSTEM_TYPE "i386-apple-darwin9.8.0"
| #define HAVE_LIBM 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_NETCDF_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char nc_open ();
| int
| main ()
| {
| return nc_open ();
| ;
| return 0;
| }
configure:17228: gcc -std=gnu99 -o conftest -g -O2 -I/Users/navarro/Software/netcdf/include -L/Users/navarro/Software/netcdf/lib conftest.c -lnetcdf -lz -lpthread -lm >&5
Undefined symbols:
"_curl_easy_strerror", referenced from:
_ocsetcurlproperties in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
"_curl_easy_perform", referenced from:
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
"_curl_easy_setopt", referenced from:
_occurlopen in libnetcdf.a(liboc_la-http.o)
_occurlopen in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
_set_user_password in libnetcdf.a(liboc_la-curlfunctions.o)
_set_user_password in libnetcdf.a(liboc_la-curlfunctions.o)
_set_proxy in libnetcdf.a(liboc_la-curlfunctions.o)
_set_proxy in libnetcdf.a(liboc_la-curlfunctions.o)
_set_proxy in libnetcdf.a(liboc_la-curlfunctions.o)
_set_cookies in libnetcdf.a(liboc_la-curlfunctions.o)
_set_cookies in libnetcdf.a(liboc_la-curlfunctions.o)
_set_verify in libnetcdf.a(liboc_la-curlfunctions.o)
_set_verify in libnetcdf.a(liboc_la-curlfunctions.o)
"_curl_easy_cleanup", referenced from:
_occurlclose in libnetcdf.a(liboc_la-http.o)
"_curl_easy_init", referenced from:
_occurlopen in libnetcdf.a(liboc_la-http.o)
"_curl_version_info", referenced from:
_ocopen in libnetcdf.a(liboc_la-ocinternal.o)
"_curl_easy_getinfo", referenced from:
_ocfetchhttpcode in libnetcdf.a(liboc_la-http.o)
_ocfetchurl in libnetcdf.a(liboc_la-http.o)
_ocfetchurl_file in libnetcdf.a(liboc_la-http.o)
_ocfetchlastmodified in libnetcdf.a(liboc_la-http.o)
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:17228: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.4.6"
| #define PACKAGE_STRING "cdo 1.4.6"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.4.6"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_ISNAN 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define COMPILER "gcc -std=gnu99 -g -O2"
| #define COMP_VERSION "i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)"
| #define USER_NAME "navarro"
| #define HOST_NAME "eduroam_um-230-85.inf.um.es"
| #define SYSTEM_TYPE "i386-apple-darwin9.8.0"
| #define HAVE_LIBM 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_NETCDF_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char nc_open ();
| int
| main ()
| {
| return nc_open ();
| ;
| return 0;
| }
configure:17245: result: no
configure:17254: error: Could not link to netcdf library

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=i386-apple-darwin9.8.0
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_func_gethostname=yes
ac_cv_func_getpagesize=yes
ac_cv_func_getrlimit=yes
ac_cv_func_isnan=yes
ac_cv_func_mallinfo=no
ac_cv_func_mmap_fixed_mapped=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_malloc_h=no
ac_cv_header_memory_h=yes
ac_cv_header_netcdf_h=yes
ac_cv_header_pthread_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_zlib_h=yes
ac_cv_host=i386-apple-darwin9.8.0
ac_cv_lib_m_floor=yes
ac_cv_lib_malloc_malloc=no
ac_cv_lib_pthread_pthread_create=yes
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AWK=awk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_AS=as
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_LD=/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NM='/usr/bin/nm -p'
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OBJDUMP=false
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_c99=-std=gnu99
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_gcc_c_o=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_search_deflate=-lz
ac_cv_search_nc_open=no
ac_cv_sys_file_offset_bits=no
ac_cv_sys_largefile_CC=no
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
lt_cv_apple_cc_single_mod=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_force_load=no
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
lt_cv_path_NM='/usr/bin/nm -p'
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run aclocal-1.11'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run tar'
AR='ar'
AS='as'
AUTOCONF='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run autoconf'
AUTOHEADER='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run autoheader'
AUTOMAKE='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run automake-1.11'
AWK='awk'
CC='gcc -std=gnu99'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2'
CLDFLAGS=''
CLIBS=''
CPP='gcc -E'
CPPFLAGS=' -I/Users/navarro/Software/netcdf/include'
CXX='g++'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2'
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
DLLTOOL=':'
DSYMUTIL='dsymutil'
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/usr/bin/grep -E'
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE=''
ENABLE_CDI_LIB=''
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE=''
ENABLE_CGRIBEX=''
ENABLE_EXTRA=''
ENABLE_GRIB=''
ENABLE_IEG=''
ENABLE_SERVICE=''
EXEEXT=''
FCFLAGS=''
FGREP='/usr/bin/grep -F'
GREP='/usr/bin/grep'
GRIB_API_INCLUDE=''
GRIB_API_LDFLAGS=''
HDF5_INCLUDE=''
HDF5_LDFLAGS=''
HOST_NAME='eduroam_um-230-85.inf.um.es'
INCLUDES=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
JASPER_LDFLAGS=''
LD='/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld'
LDFLAGS=' -L/Users/navarro/Software/netcdf/lib'
LIBOBJS=''
LIBS='-lz -lpthread -lm '
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO='lipo'
LN_S='ln -s'
LTLIBOBJS=''
MAKEINFO='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/missing --run makeinfo'
MKDIR_P='config/install-sh -c -d'
NETCDF_INCLUDE=''
NETCDF_LDFLAGS=''
NM='/usr/bin/nm -p'
NMEDIT='nmedit'
OBJDUMP='false'
OBJEXT='o'
OTOOL64=':'
OTOOL='otool'
PACKAGE='cdo'
PACKAGE_BUGREPORT='http://code.zmaw.de/projects/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 1.4.6'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='1.4.6'
PATH_SEPARATOR=':'
PROJ_INCLUDE=''
PROJ_LDFLAGS=''
RANLIB='ranlib'
SED='/usr/bin/sed'
SET_MAKE=''
SHELL='/bin/sh'
STRIP='strip'
SYSTEM_TYPE='i386-apple-darwin9.8.0'
SZLIB_INCLUDE=''
SZLIB_LDFLAGS=''
THREADS_INCLUDE=''
THREADS_LDFLAGS=' -lpthread'
USER_NAME='navarro'
VERSION='1.4.6'
ZLIB_LDFLAGS=' -lz'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i386-apple-darwin9.8.0'
build_alias=''
build_cpu='i386'
build_os='darwin9.8.0'
build_vendor='apple'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='i386-apple-darwin9.8.0'
host_alias=''
host_cpu='i386'
host_os='darwin9.8.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /Users/navarro/Software/cdo-1.4.6/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(top_builddir)/config/install-sh -c -d'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=''
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "1.4.6"
#define PACKAGE_STRING "cdo 1.4.6"
#define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
#define PACKAGE_URL ""
#define PACKAGE "cdo"
#define VERSION "1.4.6"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_STDLIB_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_GETPAGESIZE 1
#define HAVE_MMAP 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_ISNAN 1
#define HAVE_GETRLIMIT 1
#define HAVE_GETHOSTNAME 1
#define COMPILER "gcc -std=gnu99 -g -O2"
#define COMP_VERSION "i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5465)"
#define USER_NAME "navarro"
#define HOST_NAME "eduroam_um-230-85.inf.um.es"
#define SYSTEM_TYPE "i386-apple-darwin9.8.0"
#define HAVE_LIBM 1
#define HAVE_PTHREAD_H 1
#define HAVE_LIBPTHREAD 1
#define HAVE_ZLIB_H 1
#define HAVE_LIBZ 1
#define HAVE_NETCDF_H 1

configure: exit 1
    (1-1/1)