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OpenMP: num_procs=38 max_threads=1
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cdo cmor: 1. Start to read configuration files.
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cdo cmor: 1.1. Try to parse file: '/users/odonnell/RAMIP/cmor_info/cmorinfo_RSP7_nemo.txt' configured with key 'info'.
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cdo cmor: 1.1. Successfully parsed file: '/users/odonnell/RAMIP/cmor_info/cmorinfo_RSP7_nemo.txt' configured with key 'info'.
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cdo cmor: 1.2. Try to parse default file: '/users/odonnell/.cdocmorinfo'.
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In reading info table:
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Open failed on /users/odonnell/.cdocmorinfo: No such file or directory.cdo cmor (Warning): Default file for keyword 'info': '/users/odonnell/.cdocmorinfo' does not exist.
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cdo cmor: 1. Successfully read configuration files.
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cdo cmor: 2. Start to find a MIP table and to deduce a frequency from MIP table file.
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cdo cmor: 2.1. Start to check whether 'project_id' or 'mip_era' is denoted.
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cdo cmor: 2.1. Successfully found project_id / mip_era: 'CMIP6'.
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cdo cmor: 2.2. Start to find a MIP table file.
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cdo cmor: MIP table file = '/users/odonnell/RAMIP/Tables/RAMIP_Omon.json'.
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cdo cmor: 2. Successfully found a MIP table '/users/odonnell/RAMIP/Tables/RAMIP_Omon' and deduced a MIP table frequency 'Omon'.
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cdo cmor: 3. Start to open infile '/scratch/project_2008274/RSP7/output/nemo/001/RSP7_1m_20150101_20151231_opa_grid_U_3D.nc'.
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Warning (find_time_vars): Found more than one time variable, skipped variable time_centered!
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Warning (cdfInqContents): Coordinates variable time_centered can't be assigned!
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Warning (cdfInqContents): Coordinates variable time_centered can't be assigned!
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cdo cmor: 3. Successfully opened infile '/scratch/project_2008274/RSP7/output/nemo/001/RSP7_1m_20150101_20151231_opa_grid_U_3D.nc'.
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cdo cmor: 4. Start to check attributes.
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cdo cmor: 4.1. Start to check attribute 'required_time_units'.
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cdo cmor: Function 'attribute check, compare and set':
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Be aware of differences between infile and user specification.
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Attribute 'time_units' in input file: 'seconds since 1800-1-1 00:00:00' does not agree with user specification 'days since 1850-01-01 00:00:00'.
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cdo cmor: Attribute 'time_units' = 'days since 1850-01-01 00:00:00'
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cdo cmor: 4.1. Successfully checked attribute 'required_time_units'.
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cdo cmor: Attribute (from meta data file) 'institution' is 'AEMET, Spain; BSC, Spain; CNR-ISAC, Italy; DMI, Denmark; ENEA, Italy; FMI, Finland; Geomar, Germany; ICHEC, Ireland; ICTP, Italy; IDL, Portugal; IMAU, The Netherlands; IPMA, Portugal; KIT, Karlsruhe, Germany; KNMI, The Netherlands; Lund University, Sweden; Met Eireann, Ireland; NLeSC, The Netherlands; NTNU, Norway; Oxford University, UK; surfSARA, The Netherlands; SMHI, Sweden; Stockholm University, Sweden; Unite ASTR, Belgium; University College Dublin, Ireland; University of Bergen, Norway; University of Copenhagen, Denmark; University of Helsinki, Finland; University of Santiago de Compostela, Spain; Uppsala University, Sweden; Utrecht University, The Netherlands; Vrije Universiteit Amsterdam, the Netherlands; Wageningen University, The Netherlands. Mailing address: EC-Earth consortium, Rossby Center, Swedish Meteorological and Hydrological Institute/SMHI, SE-601 76 Norrkoping, Sweden'.
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cdo cmor: Attribute (from meta data file) 'source' is 'EC-Earth3-AerChem (2019): \n'.
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cdo cmor: Attribute (from meta data file) 'experiment_id' is 'ssp370'.
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cdo cmor: Attribute (from meta data file) 'rtu' is 'days since 1850-01-01 00:00:00'.
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cdo cmor: Since the project_id is CMIP6 further attributes are tested.
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cdo cmor: Attribute (from meta data file) 'activity_id' is 'ScenarioMIP AerChemMIP'.
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cdo cmor: Attribute (from meta data file) 'experiment' is 'gap-filling scenario reaching 7.0 based on SSP3'.
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cdo cmor: Attribute (from meta data file) 'grid' is 'ORCA1L75'.
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cdo cmor: Attribute (from meta data file) 'grid_label' is 'gn'.
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cdo cmor: Attribute (from meta data file) 'institution_id' is 'EC-Earth-Consortium'.
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cdo cmor: Attribute (from meta data file) 'license' is 'RAMIP model data produced by EC-Earth-Consortium is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License (https://creativecommons.org/licenses). The data producers and data providers make no warranty, either express or implied, including, but not limited to, warranties of merchantability and fitness for a particular purpose. All liabilities arising from the supply of the information (including any liability arising in negligence) are excluded to the fullest extent permitted by law.'.
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cdo cmor: Attribute (from meta data file) 'nominal_resolution' is '100 km'.
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cdo cmor: Attribute (from meta data file) 'source_id' is 'EC-Earth3-AerChem'.
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cdo cmor: Attribute (from meta data file) 'source_type' is 'AOGCM AER CHEM'.
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cdo cmor: Since you set attribute 'parent_experiment_id'='historical', further attributes are checked.
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cdo cmor: Attribute (from meta data file) 'parent_experiment_id' is 'historical'.
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cdo cmor: Attribute (from meta data file) 'parent_activity_id' is 'CMIP'.
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cdo cmor: Attribute (from meta data file) 'parent_mip_era' is 'CMIP6'.
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cdo cmor: Attribute (from meta data file) 'parent_source_id' is 'EC-Earth3-AerChem'.
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cdo cmor: Attribute (from meta data file) 'parent_variant_label' is 'r3i1p1f1'.
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cdo cmor: Attribute (from meta data file) 'parent_time_units' is 'days since 1850-01-01'.
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cdo cmor: Attribute (from meta data file) 'sub_experiment' is 'none'.
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cdo cmor: Attribute (from meta data file) 'sub_experiment_id' is 'none'.
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cdo cmor: Attribute (from meta data file) 'branch_method' is 'Perturbations are applied to restart files for both the atmosphere and ocean\ncomponents at the branch date (1989-01-01 00:00:00). The model is then run for a further 25 years\nto provide initial conditions for realizations 5 and higher.'.
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cdo cmor: 4. Successfully checked global attributes.
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cdo cmor: 5. Start to find, read and apply mapping table.
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cdo cmor: 5. No mapping table found.
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cdo cmor: 6. Start to process cmor_setup and cmor_dataset.
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cdo cmor: 6.1. Start to check model calendar as well as 'required_time_units' and 'branch_times' attributes.
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cdo cmor: 6.1.1. Start to check attribute 'calendar'.
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cdo cmor: Function 'attribute check, compare and set':
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Be aware of differences between infile and user specification.
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Attribute 'calendar' in input file: 'gregorian' does not agree with user specification 'proleptic_gregorian'.
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cdo cmor: Attribute 'calendar' = 'proleptic_gregorian'
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cdo cmor: 6.1.1. Successfully retrived calendar: 'proleptic_gregorian'.
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cdo cmor: 6.1.2. Start to compute attribute 'branch_time'.
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cdo cmor: 6.1.2. Successfully computed 'branch_time_in_parent'='50770.000000' and 'branch_time_in_child'='0.000000'.
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cdo cmor: 6.1. Successfully found valid calendar, 'required_time_units' and 'branch_times'.
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cdo cmor: 6. Successfully finished cmor_setup and cmor_dataset.
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cdo cmor: 7. Start to retrieve requested variables.
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cdo cmor: 7.1. Start to search for a command line mapping
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cdo cmor: 7.1. Successfully mapped 'uo' on 'uo' via command line attribute name.
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cdo cmor: 7. Successfully retrieved requested variables
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cdo cmor: 8. Start to define variable with ID: '1' and name: 'uo'
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cdo cmor: 8.1. Start to register time axis of 'uo'
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cdo cmor (Warning): The value for attribute cell method = 'time: mean' of variable with ID '1' is not valid.
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Depending on the aggregation method, you can specifiy one of:
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'n', 'm', 'p', 'c', 'd'.
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The default ('m') is used.
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cdo cmor: Successfully determined time_axis = '0'.
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cdo cmor: 8.1. Successfully handled time axis registration.
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cdo cmor: 8.2. Start to register grid of 'uo'
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cdo cmor: 8.2. Successfully handled grid registration.
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cdo cmor: 8.3. Start to register zaxis of 'uo'
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cdo cmor (Abort): ERROR (infile: '/scratch/project_2008274/RSP7/output/nemo/001/RSP7_1m_20150101_20151231_opa_grid_U_3D.nc')! In registration of a vertical axis:
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Z-axis type 1 with name 'olevel' not yet enabled.
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