CDO

This file contains any messages produced by compilers while

running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 1.9.5, which was

generated by GNU Autoconf 2.69. Invocation command line was

$ ./configure --with-netcdf --with-hdf5 --with-proj --with-szlib=/usr/local --with-grib_api=/usr/local/grib_api --with-fftw3 --with-curl --with-udunits --with-libxml2 --enable-all-static --disable-shared

## --------- ##

## Platform. ##

## --------- ##

hostname = WPNSBIO9009864

uname -m = i686

uname -r = 2.0.4(0.287/5/3)

uname -s = CYGWIN_NT-6.1-WOW

uname -v = 2015-06-09 12:20

/usr/bin/uname -p = unknown

/bin/uname -X = unknown

/bin/arch = i686

/usr/bin/arch -k = unknown

/usr/convex/getsysinfo = unknown

/usr/bin/hostinfo = unknown

/bin/machine = unknown

/usr/bin/oslevel = unknown

/bin/universe = unknown

PATH: /usr/local/bin

PATH: /usr/bin

PATH: /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath

PATH: /cygdrive/c/Oracle/11.2.0_x64/bin

PATH: /cygdrive/c/Windows/system32

PATH: /cygdrive/c/Windows

PATH: /cygdrive/c/Windows/System32/Wbem

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Program Files/MATLAB/R2012a/bin

PATH: /cygdrive/c/Program Files (x86)/MATLAB/R2010bSP1/bin

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0

PATH: /cygdrive/c/Users/DeTraceyB/AppData/Local/Continuum/Anaconda

PATH: /cygdrive/c/Users/DeTraceyB/AppData/Local/Continuum/Anaconda/Scripts

PATH: /usr/lib/lapack

PATH: /usr/local/mpich2-1.4.1p1/bin

PATH: /usr/local/grib_api/bin

## ----------- ##

## Core tests. ##

## ----------- ##

configure:2875: checking build system type

configure:2889: result: i686-pc-cygwin

configure:2909: checking host system type

configure:2922: result: i686-pc-cygwin

configure:2961: checking for a BSD-compatible install

configure:3029: result: /usr/bin/install -c

configure:3040: checking whether build environment is sane

configure:3095: result: yes

configure:3246: checking for a thread-safe mkdir -p

configure:3285: result: /usr/bin/mkdir -p

configure:3292: checking for gawk

configure:3308: found /usr/bin/gawk

configure:3319: result: gawk

configure:3330: checking whether make sets $(MAKE)

configure:3352: result: yes

configure:3381: checking whether make supports nested variables

configure:3398: result: yes

configure:3527: checking whether to enable maintainer-specific portions of Makefiles

configure:3536: result: no

configure:3555: checking whether make supports the include directive

configure:3570: make -f confmf.GNU && cat confinc.out

this is the am__doit target

configure:3573: $? = 0

configure:3592: result: yes (GNU style)

configure:3662: checking for gcc

configure:3678: found /usr/bin/gcc

configure:3689: result: gcc

configure:3918: checking for C compiler version

configure:3927: gcc --version >&5

gcc (GCC) 4.9.2

Copyright (C) 2014 Free Software Foundation, Inc.

This is free software; see the source for copying conditions. There is NO

warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3938: $? = 0

configure:3927: gcc -v >&5

Using built-in specs.

COLLECT_GCC=gcc

COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-pc-cygwin/4.9.2/lto-wrapper.exe

Target: i686-pc-cygwin

Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2 --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --libexecdir=/usr/libexec --datadir=/usr/share --localstatedir=/var --sysconfdir=/etc --libdir=/usr/lib --datarootdir=/usr/share --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=i686-pc-cygwin --host=i686-pc-cygwin --target=i686-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-arch=i686 --with-tune=generic --disable-sjlj-exceptions --enable-languages=ada,c,c++,fortran,java,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libgomp --disable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libjava --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id

Thread model: posix

gcc version 4.9.2 (GCC)

configure:3938: $? = 0

configure:3927: gcc -V >&5

gcc: error: unrecognized command line option '-V'

gcc: fatal error: no input files

compilation terminated.

configure:3938: $? = 1

configure:3927: gcc -qversion >&5

gcc: error: unrecognized command line option '-qversion'

gcc: fatal error: no input files

compilation terminated.

configure:3938: $? = 1

configure:3958: checking whether the C compiler works

configure:3980: gcc conftest.c >&5

configure:3984: $? = 0

configure:4032: result: yes

configure:4035: checking for C compiler default output file name

configure:4037: result: a.exe

configure:4043: checking for suffix of executables

configure:4050: gcc -o conftest.exe conftest.c >&5

configure:4054: $? = 0

configure:4076: result: .exe

configure:4098: checking whether we are cross compiling

configure:4106: gcc -o conftest.exe conftest.c >&5

configure:4110: $? = 0

configure:4117: ./conftest.exe

configure:4121: $? = 0

configure:4136: result: no

configure:4141: checking for suffix of object files

configure:4163: gcc -c conftest.c >&5

configure:4167: $? = 0

configure:4188: result: o

configure:4192: checking whether we are using the GNU C compiler

configure:4211: gcc -c conftest.c >&5

configure:4211: $? = 0

configure:4220: result: yes

configure:4229: checking whether gcc accepts -g

configure:4249: gcc -c -g conftest.c >&5

configure:4249: $? = 0

configure:4290: result: yes

configure:4307: checking for gcc option to accept ISO C89

configure:4370: gcc -c -g -O2 conftest.c >&5

configure:4370: $? = 0

configure:4383: result: none needed

configure:4408: checking whether gcc understands -c and -o together

configure:4430: gcc -c conftest.c -o conftest2.o

configure:4433: $? = 0

configure:4430: gcc -c conftest.c -o conftest2.o

configure:4433: $? = 0

configure:4445: result: yes

configure:4464: checking dependency style of gcc

configure:4575: result: gcc3

configure:4640: checking for ar

configure:4656: found /usr/bin/ar

configure:4667: result: ar

configure:4693: checking the archiver (ar) interface

configure:4709: gcc -c -g -O2 conftest.c >&5

configure:4709: $? = 0

configure:4711: ar cru libconftest.a conftest.o >&5

configure:4714: $? = 0

configure:4742: result: ar

configure:4763: setting up libtool

configure:4811: checking how to print strings

configure:4838: result: printf

configure:4859: checking for a sed that does not truncate output

configure:4923: result: /usr/bin/sed

configure:4941: checking for grep that handles long lines and -e

configure:4999: result: /usr/bin/grep

configure:5004: checking for egrep

configure:5066: result: /usr/bin/grep -E

configure:5071: checking for fgrep

configure:5133: result: /usr/bin/grep -F

configure:5168: checking for ld used by gcc

configure:5235: result: /usr/i686-pc-cygwin/bin/ld.exe

configure:5242: checking if the linker (/usr/i686-pc-cygwin/bin/ld.exe) is GNU ld

configure:5257: result: yes

configure:5269: checking for BSD- or MS-compatible name lister (nm)

configure:5323: result: /usr/bin/nm -B

configure:5453: checking the name lister (/usr/bin/nm -B) interface

configure:5460: gcc -c -g -O2 conftest.c >&5

configure:5463: /usr/bin/nm -B "conftest.o"

configure:5466: output

00000000 b .bss

00000000 d .data

00000000 N .debug_abbrev

00000000 N .debug_aranges

00000000 N .debug_info

00000000 N .debug_line

00000000 r .rdata$zzz

00000000 t .text

00000000 B _some_variable

configure:5473: result: BSD nm

configure:5476: checking whether ln -s works

configure:5480: result: yes

configure:5488: checking the maximum length of command line arguments

configure:5619: result: 8192

configure:5667: checking how to convert i686-pc-cygwin file names to i686-pc-cygwin format

configure:5707: result: func_convert_file_noop

configure:5714: checking how to convert i686-pc-cygwin file names to toolchain format

configure:5734: result: func_convert_file_noop

configure:5741: checking for /usr/i686-pc-cygwin/bin/ld.exe option to reload object files

configure:5748: result: -r

configure:5822: checking for objdump

configure:5838: found /usr/bin/objdump

configure:5849: result: objdump

configure:5881: checking how to recognize dependent libraries

configure:6081: result: file_magic ^x86 archive import|^x86 DLL

configure:6166: checking for dlltool

configure:6182: found /usr/bin/dlltool

configure:6193: result: dlltool

configure:6226: checking how to associate runtime and link libraries

configure:6253: result: func_cygming_dll_for_implib

configure:6377: checking for archiver @FILE support

configure:6394: gcc -c -g -O2 conftest.c >&5

configure:6394: $? = 0

configure:6397: ar cru libconftest.a @conftest.lst >&5

configure:6400: $? = 0

configure:6405: ar cru libconftest.a @conftest.lst >&5

ar: conftest.o: No such file or directory

configure:6408: $? = 1

configure:6420: result: @

configure:6478: checking for strip

configure:6494: found /usr/bin/strip

configure:6505: result: strip

configure:6577: checking for ranlib

configure:6593: found /usr/bin/ranlib

configure:6604: result: ranlib

configure:6706: checking command to parse /usr/bin/nm -B output from gcc object

configure:6859: gcc -c -g -O2 conftest.c >&5

configure:6862: $? = 0

configure:6866: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm

configure:6869: $? = 0

cannot find nm_test_var in conftest.nm

configure:6859: gcc -c -g -O2 conftest.c >&5

configure:6862: $? = 0

configure:6866: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm

configure:6869: $? = 0

configure:6935: gcc -o conftest.exe -g -O2 conftest.c conftstm.o >&5

configure:6938: $? = 0

configure:6976: result: ok

configure:7023: checking for sysroot

configure:7053: result: no

configure:7060: checking for a working dd

configure:7098: result: /usr/bin/dd

configure:7102: checking how to truncate binary pipes

configure:7117: result: /usr/bin/dd bs=4096 count=1

configure:7446: checking for mt

configure:7476: result: no

configure:7496: checking if : is a manifest tool

configure:7502: : '-?'

configure:7510: result: no

configure:8187: checking how to run the C preprocessor

configure:8218: gcc -E conftest.c

configure:8218: $? = 0

configure:8232: gcc -E conftest.c

conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory

#include <ac_nonexistent.h>

^

compilation terminated.

configure:8232: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| /* end confdefs.h. */

| #include <ac_nonexistent.h>

configure:8257: result: gcc -E

configure:8277: gcc -E conftest.c

configure:8277: $? = 0

configure:8291: gcc -E conftest.c

conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory

#include <ac_nonexistent.h>

^

compilation terminated.

configure:8291: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| /* end confdefs.h. */

| #include <ac_nonexistent.h>

configure:8320: checking for ANSI C header files

configure:8340: gcc -c -g -O2 conftest.c >&5

configure:8340: $? = 0

configure:8413: gcc -o conftest.exe -g -O2 conftest.c >&5

configure:8413: $? = 0

configure:8413: ./conftest.exe

configure:8413: $? = 0

configure:8424: result: yes

configure:8437: checking for sys/types.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for sys/stat.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for stdlib.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for string.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for memory.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for strings.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for inttypes.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for stdint.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8437: checking for unistd.h

configure:8437: gcc -c -g -O2 conftest.c >&5

configure:8437: $? = 0

configure:8437: result: yes

configure:8451: checking for dlfcn.h

configure:8451: gcc -c -g -O2 conftest.c >&5

configure:8451: $? = 0

configure:8451: result: yes

configure:8707: checking for objdir

configure:8722: result: .libs

configure:8986: checking if gcc supports -fno-rtti -fno-exceptions

configure:9004: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5

cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C

configure:9008: $? = 0

configure:9021: result: no

configure:9379: checking for gcc option to produce PIC

configure:9386: result: -DDLL_EXPORT -DPIC

configure:9394: checking if gcc PIC flag -DDLL_EXPORT -DPIC works

configure:9412: gcc -c -g -O2 -DDLL_EXPORT -DPIC -DPIC conftest.c >&5

configure:9416: $? = 0

configure:9429: result: yes

configure:9458: checking if gcc static flag -static works

configure:9486: result: yes

configure:9501: checking if gcc supports -c -o file.o

configure:9522: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5

configure:9526: $? = 0

configure:9548: result: yes

configure:9556: checking if gcc supports -c -o file.o

configure:9603: result: yes

configure:9636: checking whether the gcc linker (/usr/i686-pc-cygwin/bin/ld.exe) supports shared libraries

configure:10895: result: yes

configure:11135: checking dynamic linker characteristics

configure:11953: result: Win32 ld.exe

configure:12075: checking how to hardcode library paths into programs

configure:12100: result: immediate

configure:12648: checking whether stripping libraries is possible

configure:12653: result: yes

configure:12688: checking if libtool supports shared libraries

configure:12690: result: yes

configure:12693: checking whether to build shared libraries

configure:12718: result: no

configure:12721: checking whether to build static libraries

configure:12725: result: yes

configure:12810: checking for bash

configure:12840: result: /bin/sh

configure:12907: checking for gcc

configure:12934: result: gcc

configure:12999: checking for g++

configure:13015: found /usr/bin/g++

configure:13026: result: g++

configure:13048: checking for gcc option to accept ISO C99

configure:13197: gcc -c -g -O2 conftest.c >&5

conftest.c:74:29: error: expected ';', ',' or ')' before 'text'

test_restrict (ccp restrict text)

^

conftest.c: In function 'main':

conftest.c:128:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'newvar'

char *restrict newvar = "Another string";

^

conftest.c:128:18: error: 'newvar' undeclared (first use in this function)

conftest.c:128:18: note: each undeclared identifier is reported only once for each function it appears in

conftest.c:138:3: error: 'for' loop initial declarations are only allowed in C99 or C11 mode

for (int i = 0; i < ia->datasize; ++i)

^

conftest.c:138:3: note: use option -std=c99, -std=gnu99, -std=c11 or -std=gnu11 to compile your code

configure:13197: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| /* end confdefs.h. */

| #include <stdarg.h>

| #include <stdbool.h>

| #include <stdlib.h>

| #include <wchar.h>

| #include <stdio.h>

|

| // Check varargs macros. These examples are taken from C99 6.10.3.5.

| #define debug(...) fprintf (stderr, __VA_ARGS__)

| #define showlist(...) puts (#__VA_ARGS__)

| #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__))

| static void

| test_varargs_macros (void)

| {

| int x = 1234;

| int y = 5678;

| debug ("Flag");

| debug ("X = %d\n", x);

| showlist (The first, second, and third items.);

| report (x>y, "x is %d but y is %d", x, y);

| }

|

| // Check long long types.

| #define BIG64 18446744073709551615ull

| #define BIG32 4294967295ul

| #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0)

| #if !BIG_OK

| your preprocessor is broken;

| #endif

| #if BIG_OK

| #else

| your preprocessor is broken;

| #endif

| static long long int bignum = -9223372036854775807LL;

| static unsigned long long int ubignum = BIG64;

|

| struct incomplete_array

| {

| int datasize;

| double data[];

| };

|

| struct named_init {

| int number;

| const wchar_t *name;

| double average;

| };

|

| typedef const char *ccp;

|

| static inline int

| test_restrict (ccp restrict text)

| {

| // See if C++-style comments work.

| // Iterate through items via the restricted pointer.

| // Also check for declarations in for loops.

| for (unsigned int i = 0; *(text+i) != '\0'; ++i)

| continue;

| return 0;

| }

|

| // Check varargs and va_copy.

| static void

| test_varargs (const char *format, ...)

| {

| va_list args;

| va_start (args, format);

| va_list args_copy;

| va_copy (args_copy, args);

|

| const char *str;

| int number;

| float fnumber;

|

| while (*format)

| {

| switch (*format++)

| {

| case 's': // string

| str = va_arg (args_copy, const char *);

| break;

| case 'd': // int

| number = va_arg (args_copy, int);

| break;

| case 'f': // float

| fnumber = va_arg (args_copy, double);

| break;

| default:

| break;

| }

| }

| va_end (args_copy);

| va_end (args);

| }

|

| int

| main ()

| {

|

| // Check bool.

| _Bool success = false;

|

| // Check restrict.

| if (test_restrict ("String literal") == 0)

| success = true;

| char *restrict newvar = "Another string";

|

| // Check varargs.

| test_varargs ("s, d' f .", "string", 65, 34.234);

| test_varargs_macros ();

|

| // Check flexible array members.

| struct incomplete_array *ia =

| malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10));

| ia->datasize = 10;

| for (int i = 0; i < ia->datasize; ++i)

| ia->data[i] = i * 1.234;

|

| // Check named initializers.

| struct named_init ni = {

| .number = 34,

| .name = L"Test wide string",

| .average = 543.34343,

| };

|

| ni.number = 58;

|

| int dynamic_array[ni.number];

| dynamic_array[ni.number - 1] = 543;

|

| // work around unused variable warnings

| return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x'

| || dynamic_array[ni.number - 1] != 543);

|

| ;

| return 0;

| }

configure:13197: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:13197: $? = 0

configure:13217: result: -std=gnu99

configure:13338: checking for C++ compiler version

configure:13347: g++ --version >&5

g++ (GCC) 4.9.2

Copyright (C) 2014 Free Software Foundation, Inc.

This is free software; see the source for copying conditions. There is NO

warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:13358: $? = 0

configure:13347: g++ -v >&5

Using built-in specs.

COLLECT_GCC=g++

COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-pc-cygwin/4.9.2/lto-wrapper.exe

Target: i686-pc-cygwin

Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2 --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --libexecdir=/usr/libexec --datadir=/usr/share --localstatedir=/var --sysconfdir=/etc --libdir=/usr/lib --datarootdir=/usr/share --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=i686-pc-cygwin --host=i686-pc-cygwin --target=i686-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-arch=i686 --with-tune=generic --disable-sjlj-exceptions --enable-languages=ada,c,c++,fortran,java,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libgomp --disable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libjava --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id

Thread model: posix

gcc version 4.9.2 (GCC)

configure:13358: $? = 0

configure:13347: g++ -V >&5

g++: error: unrecognized command line option '-V'

g++: fatal error: no input files

compilation terminated.

configure:13358: $? = 1

configure:13347: g++ -qversion >&5

g++: error: unrecognized command line option '-qversion'

g++: fatal error: no input files

compilation terminated.

configure:13358: $? = 1

configure:13362: checking whether we are using the GNU C++ compiler

configure:13381: g++ -c conftest.cpp >&5

configure:13381: $? = 0

configure:13390: result: yes

configure:13399: checking whether g++ accepts -g

configure:13419: g++ -c -g conftest.cpp >&5

configure:13419: $? = 0

configure:13460: result: yes

configure:13485: checking dependency style of g++

configure:13596: result: gcc3

configure:13629: checking how to run the C++ preprocessor

configure:13656: g++ -E conftest.cpp

configure:13656: $? = 0

configure:13670: g++ -E conftest.cpp

conftest.cpp:24:28: fatal error: ac_nonexistent.h: No such file or directory

#include <ac_nonexistent.h>

^

compilation terminated.

configure:13670: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| /* end confdefs.h. */

| #include <ac_nonexistent.h>

configure:13695: result: g++ -E

configure:13715: g++ -E conftest.cpp

configure:13715: $? = 0

configure:13729: g++ -E conftest.cpp

conftest.cpp:24:28: fatal error: ac_nonexistent.h: No such file or directory

#include <ac_nonexistent.h>

^

compilation terminated.

configure:13729: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| /* end confdefs.h. */

| #include <ac_nonexistent.h>

configure:13891: checking for ld used by g++

configure:13958: result: /usr/i686-pc-cygwin/bin/ld.exe

configure:13965: checking if the linker (/usr/i686-pc-cygwin/bin/ld.exe) is GNU ld

configure:13980: result: yes

configure:14035: checking whether the g++ linker (/usr/i686-pc-cygwin/bin/ld.exe) supports shared libraries

configure:15108: result: yes

configure:15144: g++ -c -g -O2 conftest.cpp >&5

configure:15147: $? = 0

configure:15628: checking for g++ option to produce PIC

configure:15635: result: -DDLL_EXPORT -DPIC

configure:15643: checking if g++ PIC flag -DDLL_EXPORT -DPIC works

configure:15661: g++ -c -g -O2 -DDLL_EXPORT -DPIC -DPIC conftest.cpp >&5

configure:15665: $? = 0

configure:15678: result: yes

configure:15701: checking if g++ static flag -static works

configure:15729: result: yes

configure:15741: checking if g++ supports -c -o file.o

configure:15762: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5

configure:15766: $? = 0

configure:15788: result: yes

configure:15793: checking if g++ supports -c -o file.o

configure:15840: result: yes

configure:15870: checking whether the g++ linker (/usr/i686-pc-cygwin/bin/ld.exe) supports shared libraries

configure:15910: result: yes

configure:16051: checking dynamic linker characteristics

configure:16796: result: Win32 ld.exe

configure:16861: checking how to hardcode library paths into programs

configure:16886: result: immediate

configure:16979: checking for g77

configure:17009: result: no

configure:16979: checking for xlf

configure:17009: result: no

configure:16979: checking for f77

configure:17009: result: no

configure:16979: checking for frt

configure:17009: result: no

configure:16979: checking for pgf77

configure:17009: result: no

configure:16979: checking for cf77

configure:17009: result: no

configure:16979: checking for fort77

configure:17009: result: no

configure:16979: checking for fl32

configure:17009: result: no

configure:16979: checking for af77

configure:17009: result: no

configure:16979: checking for xlf90

configure:17009: result: no

configure:16979: checking for f90

configure:17009: result: no

configure:16979: checking for pgf90

configure:17009: result: no

configure:16979: checking for pghpf

configure:17009: result: no

configure:16979: checking for epcf90

configure:17009: result: no

configure:16979: checking for gfortran

configure:16995: found /usr/bin/gfortran

configure:17006: result: gfortran

configure:17032: checking for Fortran 77 compiler version

configure:17041: gfortran --version >&5

GNU Fortran (GCC) 4.9.2

Copyright (C) 2014 Free Software Foundation, Inc.

GNU Fortran comes with NO WARRANTY, to the extent permitted by law.

You may redistribute copies of GNU Fortran

under the terms of the GNU General Public License.

For more information about these matters, see the file named COPYING

configure:17052: $? = 0

configure:17041: gfortran -v >&5

Using built-in specs.

COLLECT_GCC=gfortran

COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-pc-cygwin/4.9.2/lto-wrapper.exe

Target: i686-pc-cygwin

Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-4.9.2-3.i686/src/gcc-4.9.2 --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --libexecdir=/usr/libexec --datadir=/usr/share --localstatedir=/var --sysconfdir=/etc --libdir=/usr/lib --datarootdir=/usr/share --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=i686-pc-cygwin --host=i686-pc-cygwin --target=i686-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-arch=i686 --with-tune=generic --disable-sjlj-exceptions --enable-languages=ada,c,c++,fortran,java,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libgomp --disable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libjava --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id

Thread model: posix

gcc version 4.9.2 (GCC)

configure:17052: $? = 0

configure:17041: gfortran -V >&5

gfortran: error: unrecognized command line option '-V'

gfortran: fatal error: no input files

compilation terminated.

configure:17052: $? = 1

configure:17041: gfortran -qversion >&5

gfortran: error: unrecognized command line option '-qversion'

gfortran: fatal error: no input files

compilation terminated.

configure:17052: $? = 1

configure:17061: checking whether we are using the GNU Fortran 77 compiler

configure:17074: gfortran -c conftest.F >&5

configure:17074: $? = 0

configure:17083: result: yes

configure:17089: checking whether gfortran accepts -g

configure:17100: gfortran -c -g conftest.f >&5

configure:17100: $? = 0

configure:17108: result: yes

configure:17237: checking if libtool supports shared libraries

configure:17239: result: yes

configure:17242: checking whether to build shared libraries

configure:17266: result: no

configure:17269: checking whether to build static libraries

configure:17273: result: yes

configure:17625: checking for gfortran option to produce PIC

configure:17632: result: -DDLL_EXPORT

configure:17640: checking if gfortran PIC flag -DDLL_EXPORT works

configure:17658: gfortran -c -g -O2 -DDLL_EXPORT conftest.f >&5

configure:17662: $? = 0

configure:17675: result: yes

configure:17698: checking if gfortran static flag -static works

configure:17726: result: yes

configure:17738: checking if gfortran supports -c -o file.o

configure:17759: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5

configure:17763: $? = 0

configure:17785: result: yes

configure:17790: checking if gfortran supports -c -o file.o

configure:17837: result: yes

configure:17867: checking whether the gfortran linker (/usr/i686-pc-cygwin/bin/ld.exe) supports shared libraries

configure:19076: result: yes

configure:19217: checking dynamic linker characteristics

configure:19956: result: Win32 ld.exe

configure:20021: checking how to hardcode library paths into programs

configure:20046: result: immediate

configure:20079: checking for C/C++ restrict keyword

configure:20104: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:20104: $? = 0

configure:20112: result: __restrict

configure:20132: checking whether g++ supports C++11 features by default

configure:20426: g++ -c -g -O2 conftest.cpp >&5

conftest.cpp:36:2: error: #error "This is not a C++11 compiler"

#error "This is not a C++11 compiler"

^

configure:20426: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| /* end confdefs.h. */

|

|

| // If the compiler admits that it is not ready for C++11, why torture it?

| // Hopefully, this will speed up the test.

|

| #ifndef __cplusplus

|

| #error "This is not a C++ compiler"

|

| #elif __cplusplus < 201103L

|

| #error "This is not a C++11 compiler"

|

| #else

|

| namespace cxx11

| {

|

| namespace test_static_assert

| {

|

| template <typename T>

| struct check

| {

| static_assert(sizeof(int) <= sizeof(T), "not big enough");

| };

|

| }

|

| namespace test_final_override

| {

|

| struct Base

| {

| virtual void f() {}

| };

|

| struct Derived : public Base

| {

| virtual void f() override {}

| };

|

| }

|

| namespace test_double_right_angle_brackets

| {

|

| template < typename T >

| struct check {};

|

| typedef check<void> single_type;

| typedef check<check<void>> double_type;

| typedef check<check<check<void>>> triple_type;

| typedef check<check<check<check<void>>>> quadruple_type;

|

| }

|

| namespace test_decltype

| {

|

| int

| f()

| {

| int a = 1;

| decltype(a) b = 2;

| return a + b;

| }

|

| }

|

| namespace test_type_deduction

| {

|

| template < typename T1, typename T2 >

| struct is_same

| {

| static const bool value = false;

| };

|

| template < typename T >

| struct is_same<T, T>

| {

| static const bool value = true;

| };

|

| template < typename T1, typename T2 >

| auto

| add(T1 a1, T2 a2) -> decltype(a1 + a2)

| {

| return a1 + a2;

| }

|

| int

| test(const int c, volatile int v)

| {

| static_assert(is_same<int, decltype(0)>::value == true, "");

| static_assert(is_same<int, decltype(c)>::value == false, "");

| static_assert(is_same<int, decltype(v)>::value == false, "");

| auto ac = c;

| auto av = v;

| auto sumi = ac + av + 'x';

| auto sumf = ac + av + 1.0;

| static_assert(is_same<int, decltype(ac)>::value == true, "");

| static_assert(is_same<int, decltype(av)>::value == true, "");

| static_assert(is_same<int, decltype(sumi)>::value == true, "");

| static_assert(is_same<int, decltype(sumf)>::value == false, "");

| static_assert(is_same<int, decltype(add(c, v))>::value == true, "");

| return (sumf > 0.0) ? sumi : add(c, v);

| }

|

| }

|

| namespace test_noexcept

| {

|

| int f() { return 0; }

| int g() noexcept { return 0; }

|

| static_assert(noexcept(f()) == false, "");

| static_assert(noexcept(g()) == true, "");

|

| }

|

| namespace test_constexpr

| {

|

| template < typename CharT >

| unsigned long constexpr

| strlen_c_r(const CharT *const s, const unsigned long acc) noexcept

| {

| return *s ? strlen_c_r(s + 1, acc + 1) : acc;

| }

|

| template < typename CharT >

| unsigned long constexpr

| strlen_c(const CharT *const s) noexcept

| {

| return strlen_c_r(s, 0UL);

| }

|

| static_assert(strlen_c("") == 0UL, "");

| static_assert(strlen_c("1") == 1UL, "");

| static_assert(strlen_c("example") == 7UL, "");

| static_assert(strlen_c("another\0example") == 7UL, "");

|

| }

|

| namespace test_rvalue_references

| {

|

| template < int N >

| struct answer

| {

| static constexpr int value = N;

| };

|

| answer<1> f(int&) { return answer<1>(); }

| answer<2> f(const int&) { return answer<2>(); }

| answer<3> f(int&&) { return answer<3>(); }

|

| void

| test()

| {

| int i = 0;

| const int c = 0;

| static_assert(decltype(f(i))::value == 1, "");

| static_assert(decltype(f(c))::value == 2, "");

| static_assert(decltype(f(0))::value == 3, "");

| }

|

| }

|

| namespace test_uniform_initialization

| {

|

| struct test

| {

| static const int zero {};

| static const int one {1};

| };

|

| static_assert(test::zero == 0, "");

| static_assert(test::one == 1, "");

|

| }

|

| namespace test_lambdas

| {

|

| void

| test1()

| {

| auto lambda1 = [](){};

| auto lambda2 = lambda1;

| lambda1();

| lambda2();

| }

|

| int

| test2()

| {

| auto a = [](int i, int j){ return i + j; }(1, 2);

| auto b = []() -> int { return '0'; }();

| auto c = [=](){ return a + b; }();

| auto d = [&](){ return c; }();

| auto e = [a, &b](int x) mutable {

| const auto identity = [](int y){ return y; };

| for (auto i = 0; i < a; ++i)

| a += b--;

| return x + identity(a + b);

| }(0);

| return a + b + c + d + e;

| }

|

| int

| test3()

| {

| const auto nullary = [](){ return 0; };

| const auto unary = [](int x){ return x; };

| using nullary_t = decltype(nullary);

| using unary_t = decltype(unary);

| const auto higher1st = [](nullary_t f){ return f(); };

| const auto higher2nd = [unary](nullary_t f1){

| return [unary, f1](unary_t f2){ return f2(unary(f1())); };

| };

| return higher1st(nullary) + higher2nd(nullary)(unary);

| }

|

| }

|

| namespace test_variadic_templates

| {

|

| template <int...>

| struct sum;

|

| template <int N0, int... N1toN>

| struct sum<N0, N1toN...>

| {

| static constexpr auto value = N0 + sum<N1toN...>::value;

| };

|

| template <>

| struct sum<>

| {

| static constexpr auto value = 0;

| };

|

| static_assert(sum<>::value == 0, "");

| static_assert(sum<1>::value == 1, "");

| static_assert(sum<23>::value == 23, "");

| static_assert(sum<1, 2>::value == 3, "");

| static_assert(sum<5, 5, 11>::value == 21, "");

| static_assert(sum<2, 3, 5, 7, 11, 13>::value == 41, "");

|

| }

|

| // http://stackoverflow.com/questions/13728184/template-aliases-and-sfinae

| // Clang 3.1 fails with headers of libstd++ 4.8.3 when using std::function

| // because of this.

| namespace test_template_alias_sfinae

| {

|

| struct foo {};

|

| template<typename T>

| using member = typename T::member_type;

|

| template<typename T>

| void func(...) {}

|

| template<typename T>

| void func(member<T>*) {}

|

| void test();

|

| void test() { func<foo>(0); }

|

| }

|

| } // namespace cxx11

|

| #endif // __cplusplus >= 201103L

|

|

|

configure:20433: result: no

configure:20443: checking whether g++ supports C++11 features with -std=gnu++11

configure:20739: g++ -std=gnu++11 -c -g -O2 conftest.cpp >&5

configure:20739: $? = 0

configure:20748: result: yes

configure:21118: checking for gcc -std=gnu99 option to support OpenMP

configure:21133: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

conftest.c:28:2: error: unknown type name 'choke'

choke me

^

In file included from conftest.c:30:0:

/usr/lib/gcc/i686-pc-cygwin/4.9.2/include/omp.h:34:1: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'typedef'

typedef struct

^

configure:21133: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| #define HAVE_CXX11 1

| /* end confdefs.h. */

|

| #ifndef _OPENMP

| choke me

| #endif

| #include <omp.h>

| int main () { return omp_get_num_threads (); }

|

configure:21151: gcc -std=gnu99 -o conftest.exe -g -O2 -fopenmp conftest.c >&5

configure:21151: $? = 0

configure:21165: result: -fopenmp

configure:21219: checking for ar

configure:21246: result: ar

configure:21403: checking for ld

configure:21430: result: /usr/i686-pc-cygwin/bin/ld.exe

configure:21495: checking for nm

configure:21522: result: /usr/bin/nm -B

configure:21587: checking for ar

configure:21614: result: ar

configure:21679: checking for as

configure:21695: found /usr/bin/as

configure:21706: result: as

configure:21771: checking for dlltool

configure:21798: result: dlltool

configure:21863: checking for objdump

configure:21890: result: objdump

configure:21955: checking for strip

configure:21982: result: strip

configure:22047: checking for ranlib

configure:22074: result: ranlib

configure:22110: checking for special C compiler options needed for large files

configure:22155: result: no

configure:22161: checking for _FILE_OFFSET_BITS value needed for large files

configure:22186: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22186: $? = 0

configure:22218: result: no

configure:22311: checking for stdlib.h

configure:22311: result: yes

configure:22311: checking for unistd.h

configure:22311: result: yes

configure:22311: checking for sys/param.h

configure:22311: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22311: $? = 0

configure:22311: result: yes

configure:22331: checking for getpagesize

configure:22331: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

configure:22331: $? = 0

configure:22331: result: yes

configure:22340: checking for working mmap

configure:22487: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

configure:22487: $? = 0

configure:22487: ./conftest.exe

configure:22487: $? = 0

configure:22497: result: yes

configure:22508: checking for malloc in -lmalloc

configure:22533: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c -lmalloc >&5

conftest.c:38:6: warning: conflicting types for built-in function 'malloc'

char malloc ();

^

/usr/lib/gcc/i686-pc-cygwin/4.9.2/../../../../i686-pc-cygwin/bin/ld: cannot find -lmalloc

collect2: error: ld returned 1 exit status

configure:22533: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| #define HAVE_CXX11 1

| #define HAVE_STDLIB_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_SYS_PARAM_H 1

| #define HAVE_GETPAGESIZE 1

| #define HAVE_MMAP 1

| /* end confdefs.h. */

|

| /* Override any GCC internal prototype to avoid an error.

| Use char because int might match the return type of a GCC

| builtin and then its argument prototype would still apply. */

| #ifdef __cplusplus

| extern "C"

| #endif

| char malloc ();

| int

| main ()

| {

| return malloc ();

| ;

| return 0;

| }

configure:22542: result: no

configure:22555: checking for struct stat.st_blksize

configure:22555: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22555: $? = 0

configure:22555: result: yes

configure:22569: checking sys/resource.h usability

configure:22569: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22569: $? = 0

configure:22569: result: yes

configure:22569: checking sys/resource.h presence

configure:22569: gcc -E conftest.c

configure:22569: $? = 0

configure:22569: result: yes

configure:22569: checking for sys/resource.h

configure:22569: result: yes

configure:22581: checking sys/times.h usability

configure:22581: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22581: $? = 0

configure:22581: result: yes

configure:22581: checking sys/times.h presence

configure:22581: gcc -E conftest.c

configure:22581: $? = 0

configure:22581: result: yes

configure:22581: checking for sys/times.h

configure:22581: result: yes

configure:22593: checking malloc.h usability

configure:22593: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22593: $? = 0

configure:22593: result: yes

configure:22593: checking malloc.h presence

configure:22593: gcc -E conftest.c

configure:22593: $? = 0

configure:22593: result: yes

configure:22593: checking for malloc.h

configure:22593: result: yes

configure:22605: checking glob.h usability

configure:22605: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22605: $? = 0

configure:22605: result: yes

configure:22605: checking glob.h presence

configure:22605: gcc -E conftest.c

configure:22605: $? = 0

configure:22605: result: yes

configure:22605: checking for glob.h

configure:22605: result: yes

configure:22617: checking fnmatch.h usability

configure:22617: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22617: $? = 0

configure:22617: result: yes

configure:22617: checking fnmatch.h presence

configure:22617: gcc -E conftest.c

configure:22617: $? = 0

configure:22617: result: yes

configure:22617: checking for fnmatch.h

configure:22617: result: yes

configure:22629: checking wordexp.h usability

configure:22629: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22629: $? = 0

configure:22629: result: yes

configure:22629: checking wordexp.h presence

configure:22629: gcc -E conftest.c

configure:22629: $? = 0

configure:22629: result: yes

configure:22629: checking for wordexp.h

configure:22629: result: yes

configure:22641: checking execinfo.h usability

configure:22641: gcc -std=gnu99 -c -g -O2 conftest.c >&5

conftest.c:71:22: fatal error: execinfo.h: No such file or directory

#include <execinfo.h>

^

compilation terminated.

configure:22641: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| #define HAVE_CXX11 1

| #define HAVE_STDLIB_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_SYS_PARAM_H 1

| #define HAVE_GETPAGESIZE 1

| #define HAVE_MMAP 1

| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1

| #define HAVE_SYS_RESOURCE_H 1

| #define HAVE_SYS_TIMES_H 1

| #define HAVE_MALLOC_H 1

| #define HAVE_GLOB_H 1

| #define HAVE_FNMATCH_H 1

| #define HAVE_WORDEXP_H 1

| /* end confdefs.h. */

| #include <stdio.h>

| #ifdef HAVE_SYS_TYPES_H

| # include <sys/types.h>

| #endif

| #ifdef HAVE_SYS_STAT_H

| # include <sys/stat.h>

| #endif

| #ifdef STDC_HEADERS

| # include <stdlib.h>

| # include <stddef.h>

| #else

| # ifdef HAVE_STDLIB_H

| # include <stdlib.h>

| # endif

| #endif

| #ifdef HAVE_STRING_H

| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H

| # include <memory.h>

| # endif

| # include <string.h>

| #endif

| #ifdef HAVE_STRINGS_H

| # include <strings.h>

| #endif

| #ifdef HAVE_INTTYPES_H

| # include <inttypes.h>

| #endif

| #ifdef HAVE_STDINT_H

| # include <stdint.h>

| #endif

| #ifdef HAVE_UNISTD_H

| # include <unistd.h>

| #endif

| #include <execinfo.h>

configure:22641: result: no

configure:22641: checking execinfo.h presence

configure:22641: gcc -E conftest.c

conftest.c:38:22: fatal error: execinfo.h: No such file or directory

#include <execinfo.h>

^

compilation terminated.

configure:22641: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| #define HAVE_CXX11 1

| #define HAVE_STDLIB_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_SYS_PARAM_H 1

| #define HAVE_GETPAGESIZE 1

| #define HAVE_MMAP 1

| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1

| #define HAVE_SYS_RESOURCE_H 1

| #define HAVE_SYS_TIMES_H 1

| #define HAVE_MALLOC_H 1

| #define HAVE_GLOB_H 1

| #define HAVE_FNMATCH_H 1

| #define HAVE_WORDEXP_H 1

| /* end confdefs.h. */

| #include <execinfo.h>

configure:22641: result: no

configure:22641: checking for execinfo.h

configure:22641: result: no

configure:22655: checking for mallinfo

configure:22655: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

configure:22655: $? = 0

configure:22655: result: yes

configure:22666: checking for backtrace

configure:22666: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

/tmp/ccpMAkVv.o: In function `main':

/usr/src/cdo-1.9.5/conftest.c:73: undefined reference to `backtrace'

collect2: error: ld returned 1 exit status

configure:22666: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"

| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"

| #define PACKAGE_URL ""

| #define CDO "1.9.5"

| #define PACKAGE "cdo"

| #define VERSION "1.9.5"

| #define STDC_HEADERS 1

| #define HAVE_SYS_TYPES_H 1

| #define HAVE_SYS_STAT_H 1

| #define HAVE_STDLIB_H 1

| #define HAVE_STRING_H 1

| #define HAVE_MEMORY_H 1

| #define HAVE_STRINGS_H 1

| #define HAVE_INTTYPES_H 1

| #define HAVE_STDINT_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_DLFCN_H 1

| #define LT_OBJDIR ".libs/"

| #define restrict __restrict

| #define HAVE_CXX11 1

| #define HAVE_STDLIB_H 1

| #define HAVE_UNISTD_H 1

| #define HAVE_SYS_PARAM_H 1

| #define HAVE_GETPAGESIZE 1

| #define HAVE_MMAP 1

| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1

| #define HAVE_SYS_RESOURCE_H 1

| #define HAVE_SYS_TIMES_H 1

| #define HAVE_MALLOC_H 1

| #define HAVE_GLOB_H 1

| #define HAVE_FNMATCH_H 1

| #define HAVE_WORDEXP_H 1

| #define HAVE_MALLINFO 1

| /* end confdefs.h. */

| /* Define backtrace to an innocuous variant, in case <limits.h> declares backtrace.

| For example, HP-UX 11i <limits.h> declares gettimeofday. */

| #define backtrace innocuous_backtrace

|

| /* System header to define __stub macros and hopefully few prototypes,

| which can conflict with char backtrace (); below.

| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since

| <limits.h> exists even on freestanding compilers. */

|

| #ifdef __STDC__

| # include <limits.h>

| #else

| # include <assert.h>

| #endif

|

| #undef backtrace

|

| /* Override any GCC internal prototype to avoid an error.

| Use char because int might match the return type of a GCC

| builtin and then its argument prototype would still apply. */

| #ifdef __cplusplus

| extern "C"

| #endif

| char backtrace ();

| /* The GNU C library defines this for functions which it implements

| to always fail with ENOSYS. Some functions are actually named

| something starting with __ and the normal name is an alias. */

| #if defined __stub_backtrace || defined __stub___backtrace

| choke me

| #endif

|

| int

| main ()

| {

| return backtrace ();

| ;

| return 0;

| }

configure:22666: result: no

configure:22679: checking for getrlimit

configure:22679: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

configure:22679: $? = 0

configure:22679: result: yes

configure:22690: checking for gethostname

configure:22690: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c >&5

configure:22690: $? = 0

configure:22690: result: yes

configure:22765: checking for floor in -lm

configure:22790: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c -lm >&5

conftest.c:52:6: warning: conflicting types for built-in function 'floor'

char floor ();

^

configure:22790: $? = 0

configure:22799: result: yes

configure:22812: checking whether isnan is declared

configure:22812: gcc -std=gnu99 -c -g -O2 conftest.c >&5

configure:22812: $? = 0

configure:22812: result: yes

configure:22827: checking for sqrtl

configure:22827: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c -lm >&5

conftest.c:70:6: warning: conflicting types for built-in function 'sqrtl'

char sqrtl ();

^

configure:22827: $? = 0

configure:22827: result: yes

configure:22838: checking for feenableexcept

configure:22838: gcc -std=gnu99 -o conftest.exe -g -O2 conftest.c -lm >&5

configure:22838: $? = 0

configure:22838: result: yes

configure:22848: checking for fenv_t.__control

configure:22848: gcc -std=gnu99 -c -g -O2 conftest.c >&5

conftest.c: In function 'main':

conftest.c:55:12: error: 'fenv_t' has no member named '__control'

if (ac_aggr.__control)

^

configure:22848: $? = 1

configure: failed program was:

| /* confdefs.h */

| #define PACKAGE_NAME "cdo"

| #define PACKAGE_TARNAME "cdo"

| #define PACKAGE_VERSION "1.9.5"

| #define PACKAGE_STRING "cdo 1.9.5"