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CMIP6 segmentation fault (CDO can't open data downloaded from ESGF)

Added by wilsmart hilory over 2 years ago

Hello...

To be sincere am not new to cdo but this type of error I'm getting is quite new to me. I downloaded CMIP6 daily precipitation data from ESGF recently and converting it to monthly data using CDO operator cdo monsum pr_day_ACCESS-ESM1-5_historical_r1i1p1f1_gn_19500101-20141231_v20191115.nc pr_Amon_ACCESS-ESM1-5_historical_r1i1p1f1_gn_195001-201412.nc gave me a segmentation fault error or so. After checking for help on the internet, I use this operator cdo -L monsum pr_day_ACCESS-ESM1-5_historical_r1i1p1f1_gn_19500101-20141231_v20191115.nc pr_Amon_ACCESS-ESM1-5_historical_r1i1p1f1_gn_195001-201412.nc this still gave me segmentation fault error. please kindly put me through on how to overcome this issue. Below is the output of "cdo -V"

Climate Data Operators version 1.9.9rc1 (https://mpimet.mpg.de/cdo)
System: x86_64-pc-linux-gnu
CXX Compiler: g++ -g -O2 -fdebug-prefix-map=/build/cdo-51aH2m/cdo-1.9.9~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp
CXX version : g++ (Ubuntu 9.2.1-28ubuntu1) 9.2.1 20200203
C Compiler: gcc -g -O2 -fdebug-prefix-map=/build/cdo-51aH2m/cdo-1.9.9~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -fopenmp
C version : gcc (Ubuntu 9.2.1-28ubuntu1) 9.2.1 20200203
F77 Compiler: f77 -g -O2 -fdebug-prefix-map=/build/cdo-51aH2m/cdo-1.9.9~rc1=. -fstack-protector-strong
F77 version : unknown
Features: 5GB 4threads C++14 Fortran DATA PTHREADS OpenMP HDF5 NC4/HDF5/threadsafe OPeNDAP SZ UDUNITS2 PROJ MAGICS CURL FFTW3 SSE2
Libraries: HDF5/1.10.4 proj/6.3.0 curl/7.68.0(h7.66.0)
Filetypes: srv ext ieg grb1 grb2 nc1 nc2 nc4 nc4c nc5
CDI library version : 1.9.9rc1
ecCodes library version : 2.16.0
NetCDF library version : 4.7.3 of Jan 23 2020 04:18:16 $
hdf5 library version : library undefined
exse library version : 1.4.1
FILE library version : 1.8.3

I tried to select small period of the data so that I can upload it here but I keep getting "segmentation fault" error.