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RE: Problem with install CDO in Cygwin ยป config.log

Phuong Nam Vu, 2014-03-19 13:29

 
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 1.6.3, which was
generated by GNU Autoconf 2.68. Invocation command line was

$ ./configure --with-netcdf=/usr --with-hdf5=/usr CFLAGS=-g -fopenmp -02

## --------- ##
## Platform. ##
## --------- ##

hostname = NaLe
uname -m = i686
uname -r = 1.7.28(0.271/5/3)
uname -s = CYGWIN_NT-6.1-WOW64
uname -v = 2014-02-09 21:06

/usr/bin/uname -p = unknown
/bin/uname -X = unknown

/bin/arch = i686
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown

PATH: /usr/local/bin
PATH: /usr/bin
PATH: /cygdrive/c/Program Files (x86)/AMD APP/bin/x86_64
PATH: /cygdrive/c/Program Files (x86)/AMD APP/bin/x86
PATH: /cygdrive/c/Program Files (x86)/Intel/iCLS Client
PATH: /cygdrive/c/Program Files/Intel/iCLS Client
PATH: /cygdrive/c/Windows/system32
PATH: /cygdrive/c/Windows
PATH: /cygdrive/c/Windows/System32/Wbem
PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0
PATH: /cygdrive/c/Program Files/Intel/Intel(R) Management Engine Components/DAL
PATH: /cygdrive/c/Program Files/Intel/Intel(R) Management Engine Components/IPT
PATH: /cygdrive/c/Program Files (x86)/Intel/Intel(R) Management Engine Components/DAL
PATH: /cygdrive/c/Program Files (x86)/Intel/Intel(R) Management Engine Components/IPT
PATH: /cygdrive/c/Program Files (x86)/ATI Technologies/ATI.ACE/Core-Static
PATH: /cygdrive/c/Program Files (x86)/Common Files/DHI/MIKEZero
PATH: /cygdrive/c/Program Files/MATLAB/R2010a/runtime/win64
PATH: /cygdrive/c/Program Files/MATLAB/R2010a/bin
PATH: /cygdrive/c/Program Files (x86)/MiKTeX 2.9/miktex/bin
PATH: /cygdrive/c/Program Files (x86)/OpenVPN/bin
PATH: /usr/bin
PATH: /usr/bin
PATH: /usr/local/bin
PATH: /usr/lib
PATH: /usr/lib


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2573: checking build system type
configure:2587: result: i686-pc-cygwin
configure:2607: checking host system type
configure:2620: result: i686-pc-cygwin
configure:2658: checking for a BSD-compatible install
configure:2726: result: /usr/bin/install -c
configure:2737: checking whether build environment is sane
configure:2787: result: yes
configure:2928: checking for a thread-safe mkdir -p
configure:2967: result: /usr/bin/mkdir -p
configure:2980: checking for gawk
configure:2996: found /usr/bin/gawk
configure:3007: result: gawk
configure:3018: checking whether make sets $(MAKE)
configure:3040: result: yes
configure:3123: checking whether to enable maintainer-specific portions of Makefiles
configure:3132: result: no
configure:3147: setting up libtool
configure:3195: checking how to print strings
configure:3222: result: printf
configure:3255: checking for style of include used by make
configure:3283: result: GNU
configure:3354: checking for gcc
configure:3370: found /usr/bin/gcc
configure:3381: result: gcc
configure:3610: checking for C compiler version
configure:3619: gcc --version >&5
gcc (GCC) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3630: $? = 0
configure:3619: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-pc-cygwin/4.8.2/lto-wrapper.exe
Target: i686-pc-cygwin
Configured with: /cygdrive/i/szsz/tmpp/gcc4/gcc-4.8.2-2/src/gcc-4.8.2/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc4/gcc-4.8.2-2/src/gcc-4.8.2 --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --libexecdir=/usr/libexec --datadir=/usr/share --localstatedir=/var --sysconfdir=/etc --libdir=/usr/lib --datarootdir=/usr/share --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=i686-pc-cygwin --host=i686-pc-cygwin --target=i686-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --disable-__cxa_atexit --with-dwarf2 --with-arch=i686 --with-tune=generic --disable-sjlj-exceptions --enable-languages=ada,c,c++,fortran,java,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libgomp --disable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libjava --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --libexecdir=/usr/lib
Thread model: posix
gcc version 4.8.2 (GCC)
configure:3630: $? = 0
configure:3619: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3630: $? = 1
configure:3619: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3630: $? = 1
configure:3650: checking whether the C compiler works
configure:3672: gcc -g -fopenmp -02 conftest.c >&5
gcc: error: unrecognized command line option '-02'
configure:3676: $? = 1
configure:3714: result: no
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.6.3"
| #define PACKAGE_STRING "cdo 1.6.3"
| #define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
| #define PACKAGE_URL ""
| #define PACKAGE "cdo"
| #define VERSION "1.6.3"
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:3719: error: in `/cygdrive/e/setups/cdo_cygwin/cdo-1.6.3':
configure:3721: error: C compiler cannot create executables
See `config.log' for more details

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=i686-pc-cygwin
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-g -fopenmp -02'
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=i686-pc-cygwin
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/usr/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_make_make_set=yes

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/missing --run aclocal-1.11'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AR=''
AS=''
AUTOCONF='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/missing --run autoconf'
AUTOHEADER='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/missing --run autoheader'
AUTOMAKE='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/missing --run automake-1.11'
AWK='gawk'
CC='gcc'
CCDEPMODE=''
CFLAGS='-g -fopenmp -02'
CLDFLAGS=''
CLIBS=''
CPP=''
CPPFLAGS=''
CURL_INCLUDE=''
CURL_LDFLAGS=''
CXX=''
CXXCPP=''
CXXDEPMODE=''
CXXFLAGS=''
CYGPATH_W='cygpath -w'
DEFS=''
DEPDIR='.deps'
DLLTOOL=''
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP=''
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE=''
ENABLE_CDI_LIB=''
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE=''
ENABLE_CGRIBEX=''
ENABLE_DATA=''
ENABLE_EXTRA=''
ENABLE_GRIB=''
ENABLE_IEG=''
ENABLE_MAGICS_FALSE=''
ENABLE_MAGICS_TRUE=''
ENABLE_SERVICE=''
EXEEXT=''
FCFLAGS=''
FGREP=''
GREP=''
GRIB_API_INCLUDE=''
GRIB_API_LIBS=''
HDF5_INCLUDE=''
HDF5_LIBS=''
HDF5_ROOT=''
HOST_NAME=''
INCLUDES=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
JASPER_LIBS=''
LD=''
LDFLAGS=''
LIBOBJS=''
LIBS=''
LIBTOOL=''
LIPO=''
LN_S=''
LTLIBOBJS=''
MAGICS_INCLUDE=''
MAGICS_LIBS=''
MAGICS_ROOT=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/missing --run makeinfo'
MKDIR_P='/usr/bin/mkdir -p'
NC_CONFIG=''
NETCDF_INCLUDE=''
NETCDF_LIBS=''
NETCDF_ROOT=''
NM=''
NMEDIT=''
OBJDUMP=''
OBJEXT=''
OTOOL64=''
OTOOL=''
PACKAGE='cdo'
PACKAGE_BUGREPORT='http://code.zmaw.de/projects/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 1.6.3'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='1.6.3'
PATH_SEPARATOR=':'
PROJ_INCLUDE=''
PROJ_LDFLAGS=''
PTHREAD_CC=''
PTHREAD_CFLAGS=''
PTHREAD_LIBS=''
RANLIB=''
SED=''
SET_MAKE=''
SHELL='/bin/sh'
STRIP=''
SYSTEM_TYPE=''
SZLIB_INCLUDE=''
SZLIB_LIBS=''
THREADS_INCLUDE=''
THREADS_LIBS=''
UDUNITS_INCLUDE=''
UDUNITS_LDFLAGS=''
USER_NAME=''
VERSION='1.6.3'
XML2_LIBS=''
ZLIB_INCLUDE=''
ZLIB_LIBS=''
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
ax_pthread_config=''
bindir='${exec_prefix}/bin'
build='i686-pc-cygwin'
build_alias=''
build_cpu='i686'
build_os='cygwin'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='i686-pc-cygwin'
host_alias=''
host_cpu='i686'
host_os='cygwin'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /cygdrive/e/setups/cdo_cygwin/cdo-1.6.3/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='/usr/bin/mkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=''
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "1.6.3"
#define PACKAGE_STRING "cdo 1.6.3"
#define PACKAGE_BUGREPORT "http://code.zmaw.de/projects/cdo"
#define PACKAGE_URL ""
#define PACKAGE "cdo"
#define VERSION "1.6.3"

configure: exit 77
    (1-1/1)