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configure: error: C preprocessor ":" fails sanity check ยป config.log

Ahmed Shaaban, 2023-04-05 14:39

 
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 2.1.1, which was
generated by GNU Autoconf 2.71. Invocation command line was

$ ./configure

## --------- ##
## Platform. ##
## --------- ##

hostname = fedora
uname -m = x86_64
uname -r = 6.0.9-100.fc35.x86_64
uname -s = Linux
uname -v = #1 SMP PREEMPT_DYNAMIC Wed Nov 16 17:25:52 UTC 2022

/usr/bin/uname -p = x86_64
/bin/uname -X = unknown

/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown

PATH: /root/.local/bin/
PATH: /root/bin/
PATH: /home/climatedata/anaconda3/bin/
PATH: /home/climatedata/anaconda3/condabin/
PATH: /home/climatedata/.local/bin/
PATH: /home/climatedata/bin/
PATH: /usr/local/bin/
PATH: /usr/local/sbin/
PATH: /usr/bin/
PATH: /usr/sbin/


## ----------- ##
## Core tests. ##
## ----------- ##

configure:3314: looking for aux files: tap-driver.sh ltmain.sh compile ar-lib missing install-sh config.guess config.sub
configure:3327: trying ./config/
configure:3356: ./config/tap-driver.sh found
configure:3356: ./config/ltmain.sh found
configure:3356: ./config/compile found
configure:3356: ./config/ar-lib found
configure:3356: ./config/missing found
configure:3338: ./config/install-sh found
configure:3356: ./config/config.guess found
configure:3356: ./config/config.sub found
configure:3482: checking build system type
configure:3497: result: x86_64-pc-linux-gnu
configure:3517: checking host system type
configure:3531: result: x86_64-pc-linux-gnu
configure:3571: checking for a BSD-compatible install
configure:3644: result: /usr/bin/install -c
configure:3655: checking whether build environment is sane
configure:3710: result: yes
configure:3869: checking for a race-free mkdir -p
configure:3913: result: /usr/bin/mkdir -p
configure:3920: checking for gawk
configure:3941: found /usr/bin/gawk
configure:3952: result: gawk
configure:3963: checking whether make sets $(MAKE)
configure:3986: result: yes
configure:4016: checking whether make supports nested variables
configure:4034: result: yes
configure:4174: checking whether to enable maintainer-specific portions of Makefiles
configure:4184: result: no
configure:4212: checking whether make supports the include directive
configure:4227: make -f confmf.GNU && cat confinc.out
this is the am__doit target
configure:4230: $? = 0
configure:4249: result: yes (GNU style)
configure:4325: checking for gcc
configure:4346: found /usr/bin/gcc
configure:4357: result: gcc
configure:4710: checking for C compiler version
configure:4719: gcc --version >&5
gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)
Copyright (C) 2021 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:4730: $? = 0
configure:4719: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-redhat-linux
Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.3.1-20220421/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 11.3.1 20220421 (Red Hat 11.3.1-3) (GCC)
... rest of stderr output deleted ...
configure:4730: $? = 0
configure:4719: gcc -V >&5
gcc: error: unrecognized command-line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:4730: $? = 1
configure:4719: gcc -qversion >&5
gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'?
gcc: fatal error: no input files
compilation terminated.
configure:4730: $? = 1
configure:4719: gcc -version >&5
gcc: error: unrecognized command-line option '-version'
gcc: fatal error: no input files
compilation terminated.
configure:4730: $? = 1
configure:4750: checking whether the C compiler works
configure:4772: gcc conftest.c >&5
configure:4776: $? = 0
configure:4826: result: yes
configure:4829: checking for C compiler default output file name
configure:4831: result: a.out
configure:4837: checking for suffix of executables
configure:4844: gcc -o conftest conftest.c >&5
configure:4848: $? = 0
configure:4871: result:
configure:4893: checking whether we are cross compiling
configure:4901: gcc -o conftest conftest.c >&5
configure:4905: $? = 0
configure:4912: ./conftest
configure:4916: $? = 0
configure:4931: result: no
configure:4936: checking for suffix of object files
configure:4959: gcc -c conftest.c >&5
configure:4963: $? = 0
configure:4985: result: o
configure:4989: checking whether the compiler supports GNU C
configure:5009: gcc -c conftest.c >&5
configure:5009: $? = 0
configure:5019: result: yes
configure:5030: checking whether gcc accepts -g
configure:5051: gcc -c -g conftest.c >&5
configure:5051: $? = 0
configure:5095: result: yes
configure:5115: checking for gcc option to enable C11 features
configure:5130: gcc -c -g -O2 conftest.c >&5
configure:5130: $? = 0
configure:5148: result: none needed
configure:5264: checking whether gcc understands -c and -o together
configure:5287: gcc -c conftest.c -o conftest2.o
configure:5290: $? = 0
configure:5287: gcc -c conftest.c -o conftest2.o
configure:5290: $? = 0
configure:5302: result: yes
configure:5321: checking dependency style of gcc
configure:5433: result: gcc3
configure:5504: checking for ar
configure:5525: found /usr/bin/ar
configure:5536: result: ar
configure:5562: checking the archiver (ar) interface
configure:5579: gcc -c -g -O2 conftest.c >&5
configure:5579: $? = 0
configure:5582: ar cru libconftest.a conftest.o >&5
configure:5585: $? = 0
configure:5613: result: ar
configure:5634: setting up libtool
configure:5683: checking how to print strings
configure:5710: result: printf
configure:5731: checking for a sed that does not truncate output
configure:5801: result: /usr/bin/sed
configure:5819: checking for grep that handles long lines and -e
configure:5883: result: /usr/bin/grep
configure:5888: checking for egrep
configure:5956: result: /usr/bin/grep -E
configure:5961: checking for fgrep
configure:6029: result: /usr/bin/grep -F
configure:6065: checking for ld used by gcc
configure:6133: result: /usr/bin/ld
configure:6140: checking if the linker (/usr/bin/ld) is GNU ld
configure:6156: result: yes
configure:6168: checking for BSD- or MS-compatible name lister (nm)
configure:6223: result: /usr/bin/nm -B
configure:6363: checking the name lister (/usr/bin/nm -B) interface
configure:6371: gcc -c -g -O2 conftest.c >&5
configure:6374: /usr/bin/nm -B "conftest.o"
configure:6377: output
0000000000000000 B some_variable
configure:6384: result: BSD nm
configure:6387: checking whether ln -s works
configure:6391: result: yes
configure:6399: checking the maximum length of command line arguments
configure:6531: result: 1572864
configure:6579: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format
configure:6620: result: func_convert_file_noop
configure:6627: checking how to convert x86_64-pc-linux-gnu file names to toolchain format
configure:6648: result: func_convert_file_noop
configure:6655: checking for /usr/bin/ld option to reload object files
configure:6663: result: -r
configure:6742: checking for file
configure:6763: found /usr/bin/file
configure:6774: result: file
configure:6850: checking for objdump
configure:6871: found /usr/bin/objdump
configure:6882: result: objdump
configure:6914: checking how to recognize dependent libraries
configure:7115: result: pass_all
configure:7205: checking for dlltool
configure:7240: result: no
configure:7270: checking how to associate runtime and link libraries
configure:7298: result: printf %s\n
configure:7448: checking for archiver @FILE support
configure:7466: gcc -c -g -O2 conftest.c >&5
configure:7466: $? = 0
configure:7470: ar cr libconftest.a @conftest.lst >&5
configure:7473: $? = 0
configure:7478: ar cr libconftest.a @conftest.lst >&5
ar: conftest.o: No such file or directory
configure:7481: $? = 1
configure:7493: result: @
configure:7556: checking for strip
configure:7577: found /usr/bin/strip
configure:7588: result: strip
configure:7665: checking for ranlib
configure:7686: found /usr/bin/ranlib
configure:7697: result: ranlib
configure:7799: checking command to parse /usr/bin/nm -B output from gcc object
configure:7953: gcc -c -g -O2 conftest.c >&5
configure:7956: $? = 0
configure:7960: /usr/bin/nm -B conftest.o \| /usr/bin/sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | /usr/bin/sed '/ __gnu_lto/d' \> conftest.nm
configure:7963: $? = 0
configure:8029: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
configure:8032: $? = 0
configure:8070: result: ok
configure:8117: checking for sysroot
configure:8148: result: no
configure:8155: checking for a working dd
configure:8199: result: /usr/bin/dd
configure:8203: checking how to truncate binary pipes
configure:8219: result: /usr/bin/dd bs=4096 count=1
configure:8356: gcc -c -g -O2 conftest.c >&5
configure:8359: $? = 0
configure:8556: checking for mt
configure:8591: result: no
configure:8611: checking if : is a manifest tool
configure:8618: : '-?'
configure:8626: result: no
configure:9351: checking for stdio.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for stdlib.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for string.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for inttypes.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for stdint.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for strings.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for sys/stat.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for sys/types.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for unistd.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9351: checking for sys/param.h
configure:9351: gcc -c -g -O2 conftest.c >&5
configure:9351: $? = 0
configure:9351: result: yes
configure:9376: checking for dlfcn.h
configure:9376: gcc -c -g -O2 conftest.c >&5
configure:9376: $? = 0
configure:9376: result: yes
configure:9635: checking for objdir
configure:9651: result: .libs
configure:9915: checking if gcc supports -fno-rtti -fno-exceptions
configure:9934: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command-line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C
configure:9938: $? = 0
configure:9951: result: no
configure:10309: checking for gcc option to produce PIC
configure:10317: result: -fPIC -DPIC
configure:10325: checking if gcc PIC flag -fPIC -DPIC works
configure:10344: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5
configure:10348: $? = 0
configure:10361: result: yes
configure:10390: checking if gcc static flag -static works
configure:10419: result: no
configure:10434: checking if gcc supports -c -o file.o
configure:10456: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:10460: $? = 0
configure:10482: result: yes
configure:10490: checking if gcc supports -c -o file.o
configure:10538: result: yes
configure:10571: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:11839: result: yes
configure:11876: checking whether -lc should be explicitly linked in
configure:11885: gcc -c -g -O2 conftest.c >&5
configure:11888: $? = 0
configure:11903: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1
configure:11906: $? = 0
configure:11920: result: no
configure:12080: checking dynamic linker characteristics
configure:12662: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5
configure:12662: $? = 0
configure:12901: result: GNU/Linux ld.so
configure:13023: checking how to hardcode library paths into programs
configure:13048: result: immediate
configure:13600: checking whether stripping libraries is possible
configure:13609: result: yes
configure:13651: checking if libtool supports shared libraries
configure:13653: result: yes
configure:13656: checking whether to build shared libraries
configure:13681: result: yes
configure:13684: checking whether to build static libraries
configure:13688: result: yes
configure:13763: checking for a Python interpreter with version >= 3.6
configure:13781: python -c import sys # split strings by '.' and convert to numeric. Append some zeros # because we need at least 4 digits for the hex conversion. # map returns an iterator in Python 3.0 and a list in 2.x minver = list(map(int, '3.6'.split('.'))) + [0, 0, 0] minverhex = 0 # xrange is not present in Python 3.0 and range returns an iterator for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i] sys.exit(sys.hexversion < minverhex)
configure:13784: $? = 0
configure:13791: result: python
configure:13799: checking for python
configure:13822: found /home/climatedata/anaconda3/bin/python
configure:13834: result: /home/climatedata/anaconda3/bin/python
configure:13851: checking for python version
configure:13859: result: 3.9
configure:13864: checking for python platform
configure:13872: result: linux
configure:13933: checking for GNU default python prefix
configure:13935: result: ${prefix}
configure:14001: checking for GNU default python exec_prefix
configure:14003: result: ${exec_prefix}
configure:14034: checking for python script directory (pythondir)
configure:14069: result: ${PYTHON_PREFIX}/lib/python3.9/site-packages
configure:14077: checking for python extension module directory (pyexecdir)
configure:14112: result: ${PYTHON_EXEC_PREFIX}/lib/python3.9/site-packages
configure:14184: checking for bash
configure:14219: result: /bin/sh
configure:14291: checking for gcc
configure:14323: result: gcc
configure:14393: checking for g++
configure:14414: found /usr/bin/g++
configure:14425: result: g++
configure:14577: checking for C++ compiler version
configure:14586: g++ --version >&5
g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)
Copyright (C) 2021 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:14597: $? = 0
configure:14586: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-redhat-linux
Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.3.1-20220421/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 11.3.1 20220421 (Red Hat 11.3.1-3) (GCC)
... rest of stderr output deleted ...
configure:14597: $? = 0
configure:14586: g++ -V >&5
g++: error: unrecognized command-line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:14597: $? = 1
configure:14586: g++ -qversion >&5
g++: error: unrecognized command-line option '-qversion'; did you mean '--version'?
g++: fatal error: no input files
compilation terminated.
configure:14597: $? = 1
configure:14601: checking whether the compiler supports GNU C++
configure:14621: g++ -c conftest.cpp >&5
configure:14621: $? = 0
configure:14631: result: yes
configure:14642: checking whether g++ accepts -g
configure:14663: g++ -c -g conftest.cpp >&5
configure:14663: $? = 0
configure:14707: result: yes
configure:14727: checking for g++ option to enable C++11 features
configure:14742: g++ -c -g -O2 conftest.cpp >&5
conftest.cpp: In function 'int main(int, char**)':
conftest.cpp:191:25: warning: empty parentheses were disambiguated as a function declaration [-Wvexing-parse]
191 | cxx11test::delegate d2();
| ^~
conftest.cpp:191:25: note: remove parentheses to default-initialize a variable
191 | cxx11test::delegate d2();
| ^~
| --
conftest.cpp:191:25: note: or replace parentheses with braces to value-initialize a variable
configure:14742: $? = 0
configure:14760: result: none needed
configure:14826: checking dependency style of g++
configure:14938: result: gcc3
configure:14971: checking how to run the C++ preprocessor
configure:14993: g++ -E conftest.cpp
configure:14993: $? = 0
configure:15008: g++ -E conftest.cpp
conftest.cpp:25:10: fatal error: ac_nonexistent.h: No such file or directory
25 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:15008: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:15035: result: g++ -E
configure:15049: g++ -E conftest.cpp
configure:15049: $? = 0
configure:15064: g++ -E conftest.cpp
conftest.cpp:25:10: fatal error: ac_nonexistent.h: No such file or directory
25 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:15064: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:15229: checking for ld used by g++
configure:15297: result: /usr/bin/ld -m elf_x86_64
configure:15304: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld
configure:15320: result: yes
configure:15375: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:16453: result: yes
configure:16489: g++ -c -g -O2 conftest.cpp >&5
configure:16492: $? = 0
configure:16973: checking for g++ option to produce PIC
configure:16981: result: -fPIC -DPIC
configure:16989: checking if g++ PIC flag -fPIC -DPIC works
configure:17008: g++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5
configure:17012: $? = 0
configure:17025: result: yes
configure:17048: checking if g++ static flag -static works
configure:17077: result: no
configure:17089: checking if g++ supports -c -o file.o
configure:17111: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:17115: $? = 0
configure:17137: result: yes
configure:17142: checking if g++ supports -c -o file.o
configure:17190: result: yes
configure:17220: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:17260: result: yes
configure:17402: checking dynamic linker characteristics
configure:18150: result: GNU/Linux ld.so
configure:18215: checking how to hardcode library paths into programs
configure:18240: result: immediate
configure:18338: checking for g77
configure:18373: result: no
configure:18338: checking for xlf
configure:18373: result: no
configure:18338: checking for f77
configure:18373: result: no
configure:18338: checking for frt
configure:18373: result: no
configure:18338: checking for pgf77
configure:18373: result: no
configure:18338: checking for cf77
configure:18373: result: no
configure:18338: checking for fort77
configure:18373: result: no
configure:18338: checking for fl32
configure:18373: result: no
configure:18338: checking for af77
configure:18373: result: no
configure:18338: checking for xlf90
configure:18373: result: no
configure:18338: checking for f90
configure:18373: result: no
configure:18338: checking for pgf90
configure:18373: result: no
configure:18338: checking for pghpf
configure:18373: result: no
configure:18338: checking for epcf90
configure:18373: result: no
configure:18338: checking for gfortran
configure:18359: found /usr/bin/gfortran
configure:18370: result: gfortran
configure:18396: checking for Fortran 77 compiler version
configure:18405: gfortran --version >&5
GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)
Copyright (C) 2021 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:18416: $? = 0
configure:18405: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-redhat-linux
Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.3.1-20220421/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 11.3.1 20220421 (Red Hat 11.3.1-3) (GCC)
... rest of stderr output deleted ...
configure:18416: $? = 0
configure:18405: gfortran -V >&5
gfortran: error: unrecognized command-line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:18416: $? = 1
configure:18405: gfortran -qversion >&5
gfortran: error: unrecognized command-line option '-qversion'; did you mean '--version'?
gfortran: fatal error: no input files
compilation terminated.
configure:18416: $? = 1
configure:18425: checking whether the compiler supports GNU Fortran 77
configure:18439: gfortran -c conftest.F >&5
configure:18439: $? = 0
configure:18449: result: yes
configure:18457: checking whether gfortran accepts -g
configure:18469: gfortran -c -g conftest.f >&5
configure:18469: $? = 0
configure:18478: result: yes
configure:18607: checking if libtool supports shared libraries
configure:18609: result: yes
configure:18612: checking whether to build shared libraries
configure:18636: result: yes
configure:18639: checking whether to build static libraries
configure:18643: result: yes
configure:18995: checking for gfortran option to produce PIC
configure:19003: result: -fPIC
configure:19011: checking if gfortran PIC flag -fPIC works
configure:19030: gfortran -c -g -O2 -fPIC conftest.f >&5
configure:19034: $? = 0
configure:19047: result: yes
configure:19070: checking if gfortran static flag -static works
configure:19099: result: no
configure:19111: checking if gfortran supports -c -o file.o
configure:19133: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:19137: $? = 0
configure:19159: result: yes
configure:19164: checking if gfortran supports -c -o file.o
configure:19212: result: yes
configure:19242: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:20459: result: yes
configure:20601: checking dynamic linker characteristics
configure:21343: result: GNU/Linux ld.so
configure:21408: checking how to hardcode library paths into programs
configure:21433: result: immediate
configure:21466: checking for C/C++ restrict keyword
configure:21496: gcc -c -g -O2 conftest.c >&5
configure:21496: $? = 0
configure:21505: result: __restrict__
configure:21524: checking whether g++ supports C++17 features by default
configure:22319: g++ -c -g -O2 conftest.cpp >&5
configure:22319: $? = 0
configure:22327: result: yes
configure:24018: checking for gcc option to support OpenMP
configure:24040: gcc -c -g -O2 conftest.c >&5
conftest.c:29:2: error: #error "OpenMP not supported"
29 | #error "OpenMP not supported"
| ^~~~~
configure:24040: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict__
| #define HAVE_CXX17 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| #error "OpenMP not supported"
| #endif
| #include <omp.h>
| int main (void) { return omp_get_num_threads (); }
|
configure:24040: gcc -c -g -O2 -fopenmp conftest.c >&5
configure:24040: $? = 0
configure:24052: gcc -o conftest -g -O2 -fopenmp conftest.c >&5
configure:24052: $? = 0
configure:24075: result: -fopenmp
configure:24132: checking for ar
configure:24164: result: ar
configure:24234: checking for cpp
configure:24269: result: no
configure:24336: checking for ld
configure:24368: result: /usr/bin/ld -m elf_x86_64
configure:24438: checking for nm
configure:24470: result: /usr/bin/nm -B
configure:24540: checking for ar
configure:24572: result: ar
configure:24642: checking for as
configure:24663: found /usr/bin/as
configure:24674: result: as
configure:24744: checking for dlltool
configure:24776: result: false
configure:24846: checking for objdump
configure:24878: result: objdump
configure:24948: checking for strip
configure:24980: result: strip
configure:25050: checking for ranlib
configure:25082: result: ranlib
configure:25119: checking for special C compiler options needed for large files
configure:25167: result: no
configure:25173: checking for _FILE_OFFSET_BITS value needed for large files
configure:25199: gcc -c -g -O2 conftest.c >&5
configure:25199: $? = 0
configure:25233: result: no
configure:25322: checking for getpagesize
configure:25322: gcc -o conftest -g -O2 conftest.c >&5
configure:25322: $? = 0
configure:25322: result: yes
configure:25333: checking for working mmap
configure:25485: gcc -o conftest -g -O2 conftest.c >&5
configure:25485: $? = 0
configure:25485: ./conftest
configure:25485: $? = 0
configure:25496: result: yes
configure:25507: checking for struct stat.st_blksize
configure:25507: gcc -c -g -O2 conftest.c >&5
configure:25507: $? = 0
configure:25507: result: yes
configure:25518: checking for sys/resource.h
configure:25518: gcc -c -g -O2 conftest.c >&5
configure:25518: $? = 0
configure:25518: result: yes
configure:25525: checking for sys/times.h
configure:25525: gcc -c -g -O2 conftest.c >&5
configure:25525: $? = 0
configure:25525: result: yes
configure:25532: checking for malloc.h
configure:25532: gcc -c -g -O2 conftest.c >&5
configure:25532: $? = 0
configure:25532: result: yes
configure:25539: checking for glob.h
configure:25539: gcc -c -g -O2 conftest.c >&5
configure:25539: $? = 0
configure:25539: result: yes
configure:25546: checking for fnmatch.h
configure:25546: gcc -c -g -O2 conftest.c >&5
configure:25546: $? = 0
configure:25546: result: yes
configure:25553: checking for wordexp.h
configure:25553: gcc -c -g -O2 conftest.c >&5
configure:25553: $? = 0
configure:25553: result: yes
configure:25560: checking for execinfo.h
configure:25560: gcc -c -g -O2 conftest.c >&5
configure:25560: $? = 0
configure:25560: result: yes
configure:25569: checking for mallinfo
configure:25569: gcc -o conftest -g -O2 conftest.c >&5
configure:25569: $? = 0
configure:25569: result: yes
configure:25576: checking for backtrace
configure:25576: gcc -o conftest -g -O2 conftest.c >&5
configure:25576: $? = 0
configure:25576: result: yes
configure:25585: checking for getrlimit
configure:25585: gcc -o conftest -g -O2 conftest.c >&5
configure:25585: $? = 0
configure:25585: result: yes
configure:25650: checking for feenableexcept
configure:25650: gcc -o conftest -g -O2 conftest.c >&5
/usr/bin/ld: /tmp/ccljsXss.o: in function `main':
/home/climatedata/cdo-2.1.1/conftest.c:71: undefined reference to `feenableexcept'
collect2: error: ld returned 1 exit status
configure:25650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict__
| #define HAVE_CXX17 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define CXX_VERSION "g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define C_VERSION "gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define F77_VERSION "GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define SYSTEM_TYPE "x86_64-pc-linux-gnu"
| /* end confdefs.h. */
| /* Define feenableexcept to an innocuous variant, in case <limits.h> declares feenableexcept.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define feenableexcept innocuous_feenableexcept
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char feenableexcept (); below. */
|
| #include <limits.h>
| #undef feenableexcept
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char feenableexcept ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_feenableexcept || defined __stub___feenableexcept
| choke me
| #endif
|
| int
| main (void)
| {
| return feenableexcept ();
| ;
| return 0;
| }
configure:25650: result: no
configure:25658: checking for fenv_t.__control
configure:25658: gcc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:50:13: error: 'fenv_t' has no member named '__control'; did you mean '__control_word'?
50 | if (ac_aggr.__control)
| ^~~~~~~~~
| __control_word
configure:25658: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict__
| #define HAVE_CXX17 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define CXX_VERSION "g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define C_VERSION "gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define F77_VERSION "GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define SYSTEM_TYPE "x86_64-pc-linux-gnu"
| /* end confdefs.h. */
| #include <fenv.h>
|
| int
| main (void)
| {
| static fenv_t ac_aggr;
| if (ac_aggr.__control)
| return 0;
| ;
| return 0;
| }
configure:25658: gcc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:50:20: error: 'fenv_t' has no member named '__control'; did you mean '__control_word'?
50 | if (sizeof ac_aggr.__control)
| ^~~~~~~~~
| __control_word
configure:25658: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "2.1.1"
| #define PACKAGE_STRING "cdo 2.1.1"
| #define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "2.1.1"
| #define PACKAGE "cdo"
| #define VERSION "2.1.1"
| #define HAVE_STDIO_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define STDC_HEADERS 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict__
| #define HAVE_CXX17 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define CXX_VERSION "g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define C_VERSION "gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define F77_VERSION "GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
| #define SYSTEM_TYPE "x86_64-pc-linux-gnu"
| /* end confdefs.h. */
| #include <fenv.h>
|
| int
| main (void)
| {
| static fenv_t ac_aggr;
| if (sizeof ac_aggr.__control)
| return 0;
| ;
| return 0;
| }
configure:25658: result: no
configure:25667: checking for fenv_t.__mxcsr
configure:25667: gcc -c -g -O2 conftest.c >&5
configure:25667: $? = 0
configure:25667: result: yes
configure:25691: checking C preprocessor flags for Fortran calling convention cfortran.h
configure:25791: result: -DgFortran (probed)
configure:25829: checking if C externals constructed with cfortran.h work
configure:25890: gcc -c -g -O2 -I./src -DgFortran conftest.c >&5
configure:25890: $? = 0
configure:25892: Renaming C object file.
configure:25895: $? = 0
configure:25913: gfortran -c -g -O2 conftest.f >&5
configure:25913: $? = 0
configure:25915: Renaming Fortran object file.
configure:25918: $? = 0
configure:25975: gfortran -o conftest -g -O2 conftest.f conftest_c.o conftest_f.o >&5
configure:25975: $? = 0
configure:25975: ./conftest
configure:25975: $? = 0
configure:26010: result: yes
configure:26075: checking how to run the C preprocessor
configure:26143: result: :
configure:26157: : -DgFortran conftest.c
configure:26157: $? = 0
configure:26172: : -DgFortran conftest.c
configure:26172: $? = 0
configure:26157: : -DgFortran conftest.c
configure:26157: $? = 0
configure:26172: : -DgFortran conftest.c
configure:26172: $? = 0
configure:26190: error: in `/home/climatedata/cdo-2.1.1':
configure:26192: error: C preprocessor ":" fails sanity check
See `config.log' for more details

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_c_restrict=__restrict__
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_DCE_UUID_C_INCLUDE_set=
ac_cv_env_DCE_UUID_C_INCLUDE_value=
ac_cv_env_DCE_UUID_C_LIB_set=
ac_cv_env_DCE_UUID_C_LIB_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LT_SYS_LIBRARY_PATH_set=
ac_cv_env_LT_SYS_LIBRARY_PATH_value=
ac_cv_env_OSSP_UUID_C_INCLUDE_set=
ac_cv_env_OSSP_UUID_C_INCLUDE_value=
ac_cv_env_OSSP_UUID_C_LIB_set=
ac_cv_env_OSSP_UUID_C_LIB_value=
ac_cv_env_PYTHON_set=
ac_cv_env_PYTHON_value=
ac_cv_env_UTIL_LINUX_UUID_C_INCLUDE_set=
ac_cv_env_UTIL_LINUX_UUID_C_INCLUDE_value=
ac_cv_env_UTIL_LINUX_UUID_C_LIB_set=
ac_cv_env_UTIL_LINUX_UUID_C_LIB_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_func_backtrace=yes
ac_cv_func_feenableexcept=no
ac_cv_func_getpagesize=yes
ac_cv_func_getrlimit=yes
ac_cv_func_mallinfo=yes
ac_cv_func_mmap_fixed_mapped=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_execinfo_h=yes
ac_cv_header_fnmatch_h=yes
ac_cv_header_glob_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_malloc_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdio_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_wordexp_h=yes
ac_cv_host=x86_64-pc-linux-gnu
ac_cv_member_fenv_t___control=no
ac_cv_member_fenv_t___mxcsr=yes
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_PYTHON=/home/climatedata/anaconda3/bin/python
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_ac_pt_BASH=/bin/sh
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_lt_DD=/usr/bin/dd
ac_cv_path_mkdir=/usr/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP=:
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_AS=as
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_DLLTOOL=false
ac_cv_prog_ac_ct_F77=gfortran
ac_cv_prog_ac_ct_FILECMD=file
ac_cv_prog_ac_ct_LD='/usr/bin/ld -m elf_x86_64'
ac_cv_prog_ac_ct_NM='/usr/bin/nm -B'
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=-fopenmp
ac_cv_prog_cc_c11=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_stdc=
ac_cv_prog_cxx_11=no
ac_cv_prog_cxx_cxx11=
ac_cv_prog_cxx_g=yes
ac_cv_prog_cxx_stdcxx=
ac_cv_prog_f77_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_sys_file_offset_bits=no
ac_cv_sys_largefile_CC=no
acx_cv_cf_flag='-DgFortran (probed)'
acx_cv_cfortran_works=yes
acx_cv_f77_cf_flag=-DgFortran
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_ar_interface=ar
am_cv_make_support_nested_variables=yes
am_cv_pathless_PYTHON=python
am_cv_prog_cc_c_o=yes
am_cv_python_platform=linux
am_cv_python_pyexecdir='${PYTHON_EXEC_PREFIX}/lib/python3.9/site-packages'
am_cv_python_pythondir='${PYTHON_PREFIX}/lib/python3.9/site-packages'
am_cv_python_version=3.9
ax_cv_cxx_compile_cxx17=yes
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
lt_cv_prog_compiler_pic_F77=-fPIC
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_shlibpath_overrides_runpath=yes
lt_cv_sys_global_symbol_pipe='/usr/bin/sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | /usr/bin/sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='/usr/bin/sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_global_symbol_to_import=
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop
lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1'

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} '\''/home/climatedata/cdo-2.1.1/config/missing'\'' aclocal-1.16'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_CPPFLAGS=''
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR='ar'
AS='as'
AUTOCONF='${SHELL} '\''/home/climatedata/cdo-2.1.1/config/missing'\'' autoconf'
AUTOHEADER='${SHELL} '\''/home/climatedata/cdo-2.1.1/config/missing'\'' autoheader'
AUTOMAKE='${SHELL} '\''/home/climatedata/cdo-2.1.1/config/missing'\'' automake-1.16'
AWK='gawk'
BASH='/bin/sh'
CC='gcc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2 -fopenmp'
CLDFLAGS=''
CLIBS=''
CMOR_LIBS=''
CPP=':'
CPPFLAGS='-DgFortran'
CSCOPE='cscope'
CTAGS='ctags'
CURL_INCLUDE=''
CURL_LDFLAGS=''
CXX='g++'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2 -fopenmp'
CYGPATH_W='echo'
DCE_UUIDROOT=''
DCE_UUID_C_INCLUDE=''
DCE_UUID_C_LIB=''
DEFS=''
DEPDIR='.deps'
DLLTOOL='false'
DSYMUTIL=''
DUMPBIN=''
ECCODES_INCLUDE=''
ECCODES_LIBS=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/usr/bin/grep -E'
ENABLE_ACROSS=''
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE=''
ENABLE_CDI_APP_FALSE=''
ENABLE_CDI_APP_TRUE=''
ENABLE_CDI_LIB=''
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE=''
ENABLE_CGRIBEX=''
ENABLE_EXTRA=''
ENABLE_FORTRAN='true'
ENABLE_GRIB=''
ENABLE_GRIBAPI=''
ENABLE_HIRLAM_EXTENSIONS_FALSE=''
ENABLE_HIRLAM_EXTENSIONS_TRUE=''
ENABLE_IEG=''
ENABLE_MAGICS_FALSE=''
ENABLE_MAGICS_TRUE=''
ENABLE_NC2=''
ENABLE_NC4=''
ENABLE_NC4HDF5=''
ENABLE_NC4SZLIB=''
ENABLE_NETCDF=''
ENABLE_SERVICE=''
ENABLE_THREADS=''
ETAGS='etags'
EXEEXT=''
F77='gfortran'
FDB5_INCLUDE=''
FDB5_LIBS=''
FFLAGS='-g -O2'
FGREP='/usr/bin/grep -F'
FILECMD='file'
FORTRAN_WORKS='yes'
GREP='/usr/bin/grep'
GRIB_API_INCLUDE=''
GRIB_API_LIBS=''
HAVE_CXX17='1'
HAVE_LIBGRIB_API_FALSE=''
HAVE_LIBGRIB_API_TRUE=''
HAVE_PYTHON_FALSE='#'
HAVE_PYTHON_TRUE=''
HDF5_INCLUDE=''
HDF5_LIBS=''
HDF5_ROOT=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/bin/ld -m elf_x86_64'
LDFLAGS=''
LIBOBJS=''
LIBS=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
LT_SYS_LIBRARY_PATH=''
MAGICS_INCLUDE=''
MAGICS_LIBS=''
MAGICS_ROOT=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} '\''/home/climatedata/cdo-2.1.1/config/missing'\'' makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/usr/bin/mkdir -p'
NC_CONFIG=''
NETCDF_INCLUDE=''
NETCDF_LIBS=''
NETCDF_ROOT=''
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJEXT='o'
OPENMP_CFLAGS='-fopenmp'
OSSP_UUIDROOT=''
OSSP_UUID_C_INCLUDE=''
OSSP_UUID_C_LIB=''
OTOOL64=''
OTOOL=''
PACKAGE='cdo'
PACKAGE_BUGREPORT='https://mpimet.mpg.de/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 2.1.1'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='2.1.1'
PATH_SEPARATOR=':'
PROJ_INCLUDE=''
PROJ_LDFLAGS=''
PTHREAD_CC=''
PTHREAD_CFLAGS=''
PTHREAD_LIBS=''
PYTHON='/home/climatedata/anaconda3/bin/python'
PYTHON_EXEC_PREFIX='${exec_prefix}'
PYTHON_PLATFORM='linux'
PYTHON_PREFIX='${prefix}'
PYTHON_VERSION='3.9'
RANLIB='ranlib'
SED='/usr/bin/sed'
SET_MAKE=''
SHELL='/bin/sh'
STRIP='strip'
SYSTEM_TYPE='x86_64-pc-linux-gnu'
SZLIB_INCLUDE=''
SZLIB_LIBS=''
THREADS_INCLUDE=''
THREADS_LIBS=''
UDUNITS_INCLUDE=''
UDUNITS_LDFLAGS=''
USE_F77_FALSE='#'
USE_F77_TRUE=''
UTIL_LINUX_UUIDROOT=''
UTIL_LINUX_UUID_C_INCLUDE=''
UTIL_LINUX_UUID_C_LIB=''
UUID_C_INCLUDE=''
UUID_C_LIB=''
VERSION='2.1.1'
XML2_LIBS=''
ac_ct_AR='ar'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
ac_ct_F77='gfortran'
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
ax_pthread_config=''
bindir='${exec_prefix}/bin'
build='x86_64-pc-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-pc-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/climatedata/cdo-2.1.1/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
pkgpyexecdir='${pyexecdir}/cdo'
pkgpythondir='${pythondir}/cdo'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
pyexecdir='${PYTHON_EXEC_PREFIX}/lib/python3.9/site-packages'
pythondir='${PYTHON_PREFIX}/lib/python3.9/site-packages'
runstatedir='${localstatedir}/run'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs_extra=''
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "2.1.1"
#define PACKAGE_STRING "cdo 2.1.1"
#define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
#define PACKAGE_URL ""
#define CDO "2.1.1"
#define PACKAGE "cdo"
#define VERSION "2.1.1"
#define HAVE_STDIO_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define STDC_HEADERS 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define restrict __restrict__
#define HAVE_CXX17 1
#define HAVE_GETPAGESIZE 1
#define HAVE_MMAP 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_MALLOC_H 1
#define HAVE_GLOB_H 1
#define HAVE_FNMATCH_H 1
#define HAVE_WORDEXP_H 1
#define HAVE_EXECINFO_H 1
#define HAVE_MALLINFO 1
#define HAVE_BACKTRACE 1
#define HAVE_GETRLIMIT 1
#define CXX_VERSION "g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
#define C_VERSION "gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
#define F77_VERSION "GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-3)"
#define SYSTEM_TYPE "x86_64-pc-linux-gnu"
#define HAVE_FENV_T___MXCSR 1
#define HAVE_CF_INTERFACE 1

configure: exit 1
    (1-1/1)