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OpenMP: num_procs=32 max_threads=1
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cdo cmor: 1. Start to read configuration files.
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cdo cmor: 1.1. Try to parse file: 'test.txt' configured with key 'info'.
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cdo cmor: 1.1. Successfully parsed file: 'test.txt' configured with key 'info'.
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cdo cmor: 1.2. Try to parse default file: '/proj/s-cmip/users/lu/x_linda/esmvaltool_rawobs/Tier3/JMA-TRANSCOM/.cdocmorinfo'.
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cdo cmor: 1.2. Successfully parsed default file: '/proj/s-cmip/users/lu/x_linda/esmvaltool_rawobs/Tier3/JMA-TRANSCOM/.cdocmorinfo'.
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cdo cmor: 1. Successfully read configuration files.
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cdo cmor: 2. Start to find a MIP table and to deduce a frequency from MIP table file.
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cdo cmor: 2.1. Start to check whether 'project_id' or 'mip_era' is denoted.
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cdo cmor: You have not provided 'mip_era' but only 'project_id'. If you try to produce CMIP5 standard,
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It is recommended to use CMOR2 for this job instead.
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cdo cmor: 2.1. Successfully found project_id / mip_era: 'CMIP6'.
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cdo cmor: 2.2. Start to find a MIP table file.
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cdo cmor: MIP table file = 'CMIP6_Lmon010028.json'.
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cdo cmor: 2. Successfully found a MIP table 'CMIP6_Lmon010028' and deduced a MIP table frequency 'Lmon010028'.
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cdo cmor: 3. Start to open infile 'mytrial_MPI-ESM1-2_gpp.nc'.
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cdo cmor: 3. Successfully opened infile 'mytrial_MPI-ESM1-2_gpp.nc'.
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cdo cmor: 4. Start to check attributes.
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cdo cmor: 4.1. Start to check attribute 'required_time_units'.
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cdo cmor (Warning): Required Attribute 'required_time_units' from configuration is invalid!
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Continue with infile time units instead.
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cdo cmor: 4.1. Successfully checked attribute 'required_time_units'.
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cdo cmor: Attribute (from meta data file) 'institution' is 'myuniversity'.
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cdo cmor: Attribute (from meta data file) 'source' is 'OBS'.
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cdo cmor: Attribute (from meta data file) 'experiment_id' is 'historical'.
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cdo cmor: Attribute (from meta data file) 'rtu' is 'days since 1850-1-1 00:00:00'.
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cdo cmor: Since the project_id is CMIP6 further attributes are tested.
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cdo cmor: Attribute (from meta data file) 'activity_id' is 'CMIP6'.
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cdo cmor: Attribute (from meta data file) 'experiment' is 'update of RCP8.5 based on SSP5'.
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cdo cmor: Attribute (from meta data file) 'grid' is 'gn'.
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cdo cmor: Attribute (from meta data file) 'grid_label' is 'gn'.
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cdo cmor: Attribute (from meta data file) 'institution_id' is 'DKRZ'.
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cdo cmor: Attribute (from meta data file) 'license' is 'CMIP6 model data produced by DKRZ is licensed under a Creative Commons Attribution ShareAlike 4.0 International License (https://creativecommons.org/licenses). Consult https://pcmdi.llnl.gov/CMIP6/TermsOfUse for terms of use governing CMIP6 output, including citation requirements and proper acknowledgment. Further information about this data, including some limitations, can be found via the further_info_url (recorded as a global attribute in this file) and. The data producers and data providers make no warranty, either express or implied, including, but not limited to, warranties of merchantability and fitness for a particular purpose. All liabilities arising from the supply of the information (including any liability arising in negligence) are excluded to the fullest extent permitted by law.'.
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cdo cmor: Attribute (from meta data file) 'nominal_resolution' is '100 km'.
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cdo cmor: Attribute (from meta data file) 'source_id' is 'MPIESM-1-2-HR'.
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cdo cmor: Attribute (from meta data file) 'source_type' is 'AOGCM'.
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cdo cmor: Since you set attribute 'parent_experiment_id'='historical', further attributes are checked.
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cdo cmor: Attribute (from meta data file) 'parent_experiment_id' is 'historical'.
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cdo cmor: Attribute (from meta data file) 'parent_activity_id' is 'CMIP'.
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cdo cmor: Attribute (from meta data file) 'parent_mip_era' is 'CMIP6'.
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cdo cmor: Attribute (from meta data file) 'parent_source_id' is 'MPI-ESM1-2-HR'.
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cdo cmor: Attribute (from meta data file) 'parent_variant_label' is 'r1i1p1f1'.
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cdo cmor: Attribute (from meta data file) 'parent_time_units' is 'days since 1850-1-1 00:00:00'.
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cdo cmor: Attribute (from meta data file) 'sub_experiment' is 'none'.
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cdo cmor: Attribute (from meta data file) 'sub_experiment_id' is 'none'.
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cdo cmor: Attribute (from meta data file) 'branch_method' is 'standard'.
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cdo cmor (Warning): You specified both variant_label and all indices attributes.
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Note that indices attributes have higher priority.
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cdo cmor: 4. Successfully checked global attributes.
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cdo cmor: 5. Start to find, read and apply mapping table.
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cdo cmor: 5. No mapping table found.
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cdo cmor: 6. Start to process cmor_setup and cmor_dataset.
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cdo cmor: 6.1. Start to check model calendar as well as 'required_time_units' and 'branch_times' attributes.
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cdo cmor: 6.1.1. Start to check attribute 'calendar'.
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cdo cmor: 6.1.1. Use calendar 'proleptic_gregorian' from infile.
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cdo cmor: 6.1.1. Successfully retrived calendar: 'proleptic_gregorian'.
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cdo cmor: 6.1.2. Start to compute attribute 'branch_time'.
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cdo cmor: 6.1.2. Successfully computed 'branch_time_in_parent'='60265.000000' and 'branch_time_in_child'='60265.000000'.
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cdo cmor: 6.1. Successfully found valid calendar, 'required_time_units' and 'branch_times'.
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cdo cmor: 6. Successfully finished cmor_setup and cmor_dataset.
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[2;31;47mC Traceback:
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! In function: cmor_load_table_internal
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! [0m
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[1;31;47m!!!!!!!!!!!!!!!!!!!!!!!!!
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!
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! Error: Could not find file: ./CMIP6_formula_terms.json
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!
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!!!!!!!!!!!!!!!!!!!!!!!!![0m
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[2;34;47mC Traceback:
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In function: [0m
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[1;34;47m!!!!!!!!!!!!!!!!!!!!!!!!!
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!
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! Warning: Can't open/read JSON table ./CMIP6_formula_terms.json
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!
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!!!!!!!!!!!!!!!!!!!!!!!!![0m
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[2;31;47mC Traceback:
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! In function: cmor_load_table_internal
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! [0m
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[1;31;47m!!!!!!!!!!!!!!!!!!!!!!!!!
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!
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! Error: Could not find file: /usr/share/cmor//CMIP6_CV.json
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!
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!!!!!!!!!!!!!!!!!!!!!!!!![0m
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[2;34;47mC Traceback:
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In function: [0m
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[1;34;47m!!!!!!!!!!!!!!!!!!!!!!!!!
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!
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! Warning: Can't open/read JSON table /usr/share/cmor//CMIP6_CV.json
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!
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!!!!!!!!!!!!!!!!!!!!!!!!![0m
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cdo cmor (Abort): ERROR (infile: 'mytrial_MPI-ESM1-2_gpp.nc')! Function cmor_load_table failed!
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