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RE: NetCDF4 data not being read in » config.log

Ashwin D, 2017-11-18 10:02

 
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 1.9.1, which was
generated by GNU Autoconf 2.68. Invocation command line was

$ ./configure --with-netcdf=/usr/local --with-hdf5=/usr/local --with-grib_spi=/usr/local

## --------- ##
## Platform. ##
## --------- ##

hostname = winash12-OptiPlex-7050
uname -m = x86_64
uname -r = 4.10.0-38-generic
uname -s = Linux
uname -v = #42~16.04.1-Ubuntu SMP Tue Oct 10 16:32:20 UTC 2017

/usr/bin/uname -p = unknown
/bin/uname -X = unknown

/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown

PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
PATH: /usr/local/games


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2612: checking build system type
configure:2626: result: x86_64-unknown-linux-gnu
configure:2646: checking host system type
configure:2659: result: x86_64-unknown-linux-gnu
configure:2698: checking for a BSD-compatible install
configure:2766: result: /usr/bin/install -c
configure:2777: checking whether build environment is sane
configure:2832: result: yes
configure:2983: checking for a thread-safe mkdir -p
configure:3022: result: /bin/mkdir -p
configure:3029: checking for gawk
configure:3059: result: no
configure:3029: checking for mawk
configure:3045: found /usr/bin/mawk
configure:3056: result: mawk
configure:3067: checking whether make sets $(MAKE)
configure:3089: result: yes
configure:3118: checking whether make supports nested variables
configure:3135: result: yes
configure:3263: checking whether to enable maintainer-specific portions of Makefiles
configure:3272: result: no
configure:3299: checking for style of include used by make
configure:3327: result: GNU
configure:3398: checking for gcc
configure:3414: found /usr/bin/gcc
configure:3425: result: gcc
configure:3654: checking for C compiler version
configure:3663: gcc --version >&5
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3674: $? = 0
configure:3663: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.5' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.5)
configure:3674: $? = 0
configure:3663: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3674: $? = 1
configure:3663: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3674: $? = 1
configure:3694: checking whether the C compiler works
configure:3716: gcc conftest.c >&5
configure:3720: $? = 0
configure:3768: result: yes
configure:3771: checking for C compiler default output file name
configure:3773: result: a.out
configure:3779: checking for suffix of executables
configure:3786: gcc -o conftest conftest.c >&5
configure:3790: $? = 0
configure:3812: result:
configure:3834: checking whether we are cross compiling
configure:3842: gcc -o conftest conftest.c >&5
configure:3846: $? = 0
configure:3853: ./conftest
configure:3857: $? = 0
configure:3872: result: no
configure:3877: checking for suffix of object files
configure:3899: gcc -c conftest.c >&5
configure:3903: $? = 0
configure:3924: result: o
configure:3928: checking whether we are using the GNU C compiler
configure:3947: gcc -c conftest.c >&5
configure:3947: $? = 0
configure:3956: result: yes
configure:3965: checking whether gcc accepts -g
configure:3985: gcc -c -g conftest.c >&5
configure:3985: $? = 0
configure:4026: result: yes
configure:4043: checking for gcc option to accept ISO C89
configure:4107: gcc -c -g -O2 conftest.c >&5
configure:4107: $? = 0
configure:4120: result: none needed
configure:4145: checking whether gcc understands -c and -o together
configure:4167: gcc -c conftest.c -o conftest2.o
configure:4170: $? = 0
configure:4167: gcc -c conftest.c -o conftest2.o
configure:4170: $? = 0
configure:4182: result: yes
configure:4201: checking dependency style of gcc
configure:4312: result: gcc3
configure:4377: checking for ar
configure:4393: found /usr/bin/ar
configure:4404: result: ar
configure:4430: checking the archiver (ar) interface
configure:4446: gcc -c -g -O2 conftest.c >&5
configure:4446: $? = 0
configure:4448: ar cru libconftest.a conftest.o >&5
ar: `u' modifier ignored since `D' is the default (see `U')
configure:4451: $? = 0
configure:4479: result: ar
configure:4500: setting up libtool
configure:4548: checking how to print strings
configure:4575: result: printf
configure:4596: checking for a sed that does not truncate output
configure:4660: result: /bin/sed
configure:4678: checking for grep that handles long lines and -e
configure:4736: result: /bin/grep
configure:4741: checking for egrep
configure:4803: result: /bin/grep -E
configure:4808: checking for fgrep
configure:4870: result: /bin/grep -F
configure:4905: checking for ld used by gcc
configure:4972: result: /usr/bin/ld
configure:4979: checking if the linker (/usr/bin/ld) is GNU ld
configure:4994: result: yes
configure:5006: checking for BSD- or MS-compatible name lister (nm)
configure:5055: result: /usr/bin/nm -B
configure:5185: checking the name lister (/usr/bin/nm -B) interface
configure:5192: gcc -c -g -O2 conftest.c >&5
configure:5195: /usr/bin/nm -B "conftest.o"
configure:5198: output
0000000000000000 B some_variable
configure:5205: result: BSD nm
configure:5208: checking whether ln -s works
configure:5212: result: yes
configure:5220: checking the maximum length of command line arguments
configure:5350: result: 1572864
configure:5367: checking whether the shell understands some XSI constructs
configure:5377: result: yes
configure:5381: checking whether the shell understands "+="
configure:5387: result: yes
configure:5422: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format
configure:5462: result: func_convert_file_noop
configure:5469: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format
configure:5489: result: func_convert_file_noop
configure:5496: checking for /usr/bin/ld option to reload object files
configure:5503: result: -r
configure:5577: checking for objdump
configure:5593: found /usr/bin/objdump
configure:5604: result: objdump
configure:5636: checking how to recognize dependent libraries
configure:5838: result: pass_all
configure:5923: checking for dlltool
configure:5953: result: no
configure:5983: checking how to associate runtime and link libraries
configure:6010: result: printf %s\n
configure:6134: checking for archiver @FILE support
configure:6151: gcc -c -g -O2 conftest.c >&5
configure:6151: $? = 0
configure:6154: ar cru libconftest.a @conftest.lst >&5
ar: `u' modifier ignored since `D' is the default (see `U')
configure:6157: $? = 0
configure:6162: ar cru libconftest.a @conftest.lst >&5
ar: `u' modifier ignored since `D' is the default (see `U')
ar: conftest.o: No such file or directory
configure:6165: $? = 1
configure:6177: result: @
configure:6235: checking for strip
configure:6251: found /usr/bin/strip
configure:6262: result: strip
configure:6334: checking for ranlib
configure:6350: found /usr/bin/ranlib
configure:6361: result: ranlib
configure:6463: checking command to parse /usr/bin/nm -B output from gcc object
configure:6583: gcc -c -g -O2 conftest.c >&5
configure:6586: $? = 0
configure:6590: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:6593: $? = 0
configure:6659: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
configure:6662: $? = 0
configure:6700: result: ok
configure:6737: checking for sysroot
configure:6767: result: no
configure:6844: gcc -c -g -O2 conftest.c >&5
configure:6847: $? = 0
configure:7023: checking for mt
configure:7039: found /bin/mt
configure:7050: result: mt
configure:7073: checking if mt is a manifest tool
configure:7079: mt '-?'
configure:7087: result: no
configure:7729: checking how to run the C preprocessor
configure:7760: gcc -E conftest.c
configure:7760: $? = 0
configure:7774: gcc -E conftest.c
conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:7774: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7799: result: gcc -E
configure:7819: gcc -E conftest.c
configure:7819: $? = 0
configure:7833: gcc -E conftest.c
conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:7833: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7862: checking for ANSI C header files
configure:7882: gcc -c -g -O2 conftest.c >&5
configure:7882: $? = 0
configure:7955: gcc -o conftest -g -O2 conftest.c >&5
configure:7955: $? = 0
configure:7955: ./conftest
configure:7955: $? = 0
configure:7966: result: yes
configure:7979: checking for sys/types.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for sys/stat.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for stdlib.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for string.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for memory.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for strings.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for inttypes.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for stdint.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7979: checking for unistd.h
configure:7979: gcc -c -g -O2 conftest.c >&5
configure:7979: $? = 0
configure:7979: result: yes
configure:7993: checking for dlfcn.h
configure:7993: gcc -c -g -O2 conftest.c >&5
configure:7993: $? = 0
configure:7993: result: yes
configure:8199: checking for objdir
configure:8214: result: .libs
configure:8485: checking if gcc supports -fno-rtti -fno-exceptions
configure:8503: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C
configure:8507: $? = 0
configure:8520: result: no
configure:8847: checking for gcc option to produce PIC
configure:8854: result: -fPIC -DPIC
configure:8862: checking if gcc PIC flag -fPIC -DPIC works
configure:8880: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5
configure:8884: $? = 0
configure:8897: result: yes
configure:8926: checking if gcc static flag -static works
configure:8954: result: yes
configure:8969: checking if gcc supports -c -o file.o
configure:8990: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:8994: $? = 0
configure:9016: result: yes
configure:9024: checking if gcc supports -c -o file.o
configure:9071: result: yes
configure:9104: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:10257: result: yes
configure:10294: checking whether -lc should be explicitly linked in
configure:10302: gcc -c -g -O2 conftest.c >&5
configure:10305: $? = 0
configure:10320: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1
configure:10323: $? = 0
configure:10337: result: no
configure:10497: checking dynamic linker characteristics
configure:11008: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5
configure:11008: $? = 0
configure:11230: result: GNU/Linux ld.so
configure:11337: checking how to hardcode library paths into programs
configure:11362: result: immediate
configure:11902: checking whether stripping libraries is possible
configure:11907: result: yes
configure:11942: checking if libtool supports shared libraries
configure:11944: result: yes
configure:11947: checking whether to build shared libraries
configure:11968: result: yes
configure:11971: checking whether to build static libraries
configure:11975: result: yes
configure:12060: checking for bash
configure:12090: result: /bin/bash
configure:12157: checking for gcc
configure:12184: result: gcc
configure:12249: checking for g++
configure:12265: found /usr/bin/g++
configure:12276: result: g++
configure:12298: checking for gcc option to accept ISO C99
configure:12447: gcc -c -g -O2 conftest.c >&5
configure:12447: $? = 0
configure:12460: result: none needed
configure:12588: checking for C++ compiler version
configure:12597: g++ --version >&5
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:12608: $? = 0
configure:12597: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.5' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.5)
configure:12608: $? = 0
configure:12597: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:12608: $? = 1
configure:12597: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'
g++: fatal error: no input files
compilation terminated.
configure:12608: $? = 1
configure:12612: checking whether we are using the GNU C++ compiler
configure:12631: g++ -c conftest.cpp >&5
configure:12631: $? = 0
configure:12640: result: yes
configure:12649: checking whether g++ accepts -g
configure:12669: g++ -c -g conftest.cpp >&5
configure:12669: $? = 0
configure:12710: result: yes
configure:12735: checking dependency style of g++
configure:12846: result: gcc3
configure:12879: checking how to run the C++ preprocessor
configure:12906: g++ -E conftest.cpp
configure:12906: $? = 0
configure:12920: g++ -E conftest.cpp
conftest.cpp:24:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:12920: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:12945: result: g++ -E
configure:12965: g++ -E conftest.cpp
configure:12965: $? = 0
configure:12979: g++ -E conftest.cpp
conftest.cpp:24:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:12979: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:13148: checking for ld used by g++
configure:13215: result: /usr/bin/ld -m elf_x86_64
configure:13222: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld
configure:13237: result: yes
configure:13292: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:14297: result: yes
configure:14333: g++ -c -g -O2 conftest.cpp >&5
configure:14336: $? = 0
configure:14856: checking for g++ option to produce PIC
configure:14863: result: -fPIC -DPIC
configure:14871: checking if g++ PIC flag -fPIC -DPIC works
configure:14889: g++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5
configure:14893: $? = 0
configure:14906: result: yes
configure:14929: checking if g++ static flag -static works
configure:14957: result: yes
configure:14969: checking if g++ supports -c -o file.o
configure:14990: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:14994: $? = 0
configure:15016: result: yes
configure:15021: checking if g++ supports -c -o file.o
configure:15068: result: yes
configure:15098: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:15134: result: yes
configure:15275: checking dynamic linker characteristics
configure:15942: result: GNU/Linux ld.so
configure:15995: checking how to hardcode library paths into programs
configure:16020: result: immediate
configure:16060: checking for C/C++ restrict keyword
configure:16085: gcc -c -g -O2 conftest.c >&5
configure:16085: $? = 0
configure:16093: result: __restrict
configure:16113: checking whether g++ supports C++11 features by default
configure:16407: g++ -c -g -O2 conftest.cpp >&5
conftest.cpp:36:2: error: #error "This is not a C++11 compiler"
#error "This is not a C++11 compiler"
^
configure:16407: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| /* end confdefs.h. */
|
|
| // If the compiler admits that it is not ready for C++11, why torture it?
| // Hopefully, this will speed up the test.
|
| #ifndef __cplusplus
|
| #error "This is not a C++ compiler"
|
| #elif __cplusplus < 201103L
|
| #error "This is not a C++11 compiler"
|
| #else
|
| namespace cxx11
| {
|
| namespace test_static_assert
| {
|
| template <typename T>
| struct check
| {
| static_assert(sizeof(int) <= sizeof(T), "not big enough");
| };
|
| }
|
| namespace test_final_override
| {
|
| struct Base
| {
| virtual void f() {}
| };
|
| struct Derived : public Base
| {
| virtual void f() override {}
| };
|
| }
|
| namespace test_double_right_angle_brackets
| {
|
| template < typename T >
| struct check {};
|
| typedef check<void> single_type;
| typedef check<check<void>> double_type;
| typedef check<check<check<void>>> triple_type;
| typedef check<check<check<check<void>>>> quadruple_type;
|
| }
|
| namespace test_decltype
| {
|
| int
| f()
| {
| int a = 1;
| decltype(a) b = 2;
| return a + b;
| }
|
| }
|
| namespace test_type_deduction
| {
|
| template < typename T1, typename T2 >
| struct is_same
| {
| static const bool value = false;
| };
|
| template < typename T >
| struct is_same<T, T>
| {
| static const bool value = true;
| };
|
| template < typename T1, typename T2 >
| auto
| add(T1 a1, T2 a2) -> decltype(a1 + a2)
| {
| return a1 + a2;
| }
|
| int
| test(const int c, volatile int v)
| {
| static_assert(is_same<int, decltype(0)>::value == true, "");
| static_assert(is_same<int, decltype(c)>::value == false, "");
| static_assert(is_same<int, decltype(v)>::value == false, "");
| auto ac = c;
| auto av = v;
| auto sumi = ac + av + 'x';
| auto sumf = ac + av + 1.0;
| static_assert(is_same<int, decltype(ac)>::value == true, "");
| static_assert(is_same<int, decltype(av)>::value == true, "");
| static_assert(is_same<int, decltype(sumi)>::value == true, "");
| static_assert(is_same<int, decltype(sumf)>::value == false, "");
| static_assert(is_same<int, decltype(add(c, v))>::value == true, "");
| return (sumf > 0.0) ? sumi : add(c, v);
| }
|
| }
|
| namespace test_noexcept
| {
|
| int f() { return 0; }
| int g() noexcept { return 0; }
|
| static_assert(noexcept(f()) == false, "");
| static_assert(noexcept(g()) == true, "");
|
| }
|
| namespace test_constexpr
| {
|
| template < typename CharT >
| unsigned long constexpr
| strlen_c_r(const CharT *const s, const unsigned long acc) noexcept
| {
| return *s ? strlen_c_r(s + 1, acc + 1) : acc;
| }
|
| template < typename CharT >
| unsigned long constexpr
| strlen_c(const CharT *const s) noexcept
| {
| return strlen_c_r(s, 0UL);
| }
|
| static_assert(strlen_c("") == 0UL, "");
| static_assert(strlen_c("1") == 1UL, "");
| static_assert(strlen_c("example") == 7UL, "");
| static_assert(strlen_c("another\0example") == 7UL, "");
|
| }
|
| namespace test_rvalue_references
| {
|
| template < int N >
| struct answer
| {
| static constexpr int value = N;
| };
|
| answer<1> f(int&) { return answer<1>(); }
| answer<2> f(const int&) { return answer<2>(); }
| answer<3> f(int&&) { return answer<3>(); }
|
| void
| test()
| {
| int i = 0;
| const int c = 0;
| static_assert(decltype(f(i))::value == 1, "");
| static_assert(decltype(f(c))::value == 2, "");
| static_assert(decltype(f(0))::value == 3, "");
| }
|
| }
|
| namespace test_uniform_initialization
| {
|
| struct test
| {
| static const int zero {};
| static const int one {1};
| };
|
| static_assert(test::zero == 0, "");
| static_assert(test::one == 1, "");
|
| }
|
| namespace test_lambdas
| {
|
| void
| test1()
| {
| auto lambda1 = [](){};
| auto lambda2 = lambda1;
| lambda1();
| lambda2();
| }
|
| int
| test2()
| {
| auto a = [](int i, int j){ return i + j; }(1, 2);
| auto b = []() -> int { return '0'; }();
| auto c = [=](){ return a + b; }();
| auto d = [&](){ return c; }();
| auto e = [a, &b](int x) mutable {
| const auto identity = [](int y){ return y; };
| for (auto i = 0; i < a; ++i)
| a += b--;
| return x + identity(a + b);
| }(0);
| return a + b + c + d + e;
| }
|
| int
| test3()
| {
| const auto nullary = [](){ return 0; };
| const auto unary = [](int x){ return x; };
| using nullary_t = decltype(nullary);
| using unary_t = decltype(unary);
| const auto higher1st = [](nullary_t f){ return f(); };
| const auto higher2nd = [unary](nullary_t f1){
| return [unary, f1](unary_t f2){ return f2(unary(f1())); };
| };
| return higher1st(nullary) + higher2nd(nullary)(unary);
| }
|
| }
|
| namespace test_variadic_templates
| {
|
| template <int...>
| struct sum;
|
| template <int N0, int... N1toN>
| struct sum<N0, N1toN...>
| {
| static constexpr auto value = N0 + sum<N1toN...>::value;
| };
|
| template <>
| struct sum<>
| {
| static constexpr auto value = 0;
| };
|
| static_assert(sum<>::value == 0, "");
| static_assert(sum<1>::value == 1, "");
| static_assert(sum<23>::value == 23, "");
| static_assert(sum<1, 2>::value == 3, "");
| static_assert(sum<5, 5, 11>::value == 21, "");
| static_assert(sum<2, 3, 5, 7, 11, 13>::value == 41, "");
|
| }
|
| // http://stackoverflow.com/questions/13728184/template-aliases-and-sfinae
| // Clang 3.1 fails with headers of libstd++ 4.8.3 when using std::function
| // because of this.
| namespace test_template_alias_sfinae
| {
|
| struct foo {};
|
| template<typename T>
| using member = typename T::member_type;
|
| template<typename T>
| void func(...) {}
|
| template<typename T>
| void func(member<T>*) {}
|
| void test();
|
| void test() { func<foo>(0); }
|
| }
|
| } // namespace cxx11
|
| #endif // __cplusplus >= 201103L
|
|
|
configure:16414: result: no
configure:16424: checking whether g++ supports C++11 features with -std=gnu++11
configure:16720: g++ -std=gnu++11 -c -g -O2 conftest.cpp >&5
configure:16720: $? = 0
configure:16729: result: yes
configure:17099: checking for gcc option to support OpenMP
configure:17114: gcc -o conftest -g -O2 conftest.c >&5
conftest.c:28:2: error: unknown type name 'choke'
choke me
^
In file included from conftest.c:30:0:
/usr/lib/gcc/x86_64-linux-gnu/5/include/omp.h:35:1: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'typedef'
typedef struct
^
configure:17114: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:17131: gcc -o conftest -g -O2 -fopenmp conftest.c >&5
configure:17131: $? = 0
configure:17145: result: -fopenmp
configure:17199: checking for ar
configure:17226: result: ar
configure:17383: checking for ld
configure:17410: result: /usr/bin/ld -m elf_x86_64
configure:17475: checking for nm
configure:17502: result: /usr/bin/nm -B
configure:17567: checking for ar
configure:17594: result: ar
configure:17659: checking for as
configure:17675: found /usr/bin/as
configure:17686: result: as
configure:17751: checking for dlltool
configure:17778: result: false
configure:17843: checking for objdump
configure:17870: result: objdump
configure:17935: checking for strip
configure:17962: result: strip
configure:18027: checking for ranlib
configure:18054: result: ranlib
configure:18089: checking for special C compiler options needed for large files
configure:18134: result: no
configure:18140: checking for _FILE_OFFSET_BITS value needed for large files
configure:18165: gcc -c -g -O2 conftest.c >&5
configure:18165: $? = 0
configure:18197: result: no
configure:18288: checking for stdlib.h
configure:18288: result: yes
configure:18288: checking for unistd.h
configure:18288: result: yes
configure:18288: checking for sys/param.h
configure:18288: gcc -c -g -O2 conftest.c >&5
configure:18288: $? = 0
configure:18288: result: yes
configure:18308: checking for getpagesize
configure:18308: gcc -o conftest -g -O2 conftest.c >&5
configure:18308: $? = 0
configure:18308: result: yes
configure:18317: checking for working mmap
configure:18464: gcc -o conftest -g -O2 conftest.c >&5
configure:18464: $? = 0
configure:18464: ./conftest
configure:18464: $? = 0
configure:18474: result: yes
configure:18485: checking for malloc in -lmalloc
configure:18510: gcc -o conftest -g -O2 conftest.c -lmalloc >&5
conftest.c:38:6: warning: conflicting types for built-in function 'malloc'
char malloc ();
^
/usr/bin/ld: cannot find -lmalloc
collect2: error: ld returned 1 exit status
configure:18510: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char malloc ();
| int
| main ()
| {
| return malloc ();
| ;
| return 0;
| }
configure:18519: result: no
configure:18532: checking for struct stat.st_blksize
configure:18532: gcc -c -g -O2 conftest.c >&5
configure:18532: $? = 0
configure:18532: result: yes
configure:18546: checking sys/resource.h usability
configure:18546: gcc -c -g -O2 conftest.c >&5
configure:18546: $? = 0
configure:18546: result: yes
configure:18546: checking sys/resource.h presence
configure:18546: gcc -E conftest.c
configure:18546: $? = 0
configure:18546: result: yes
configure:18546: checking for sys/resource.h
configure:18546: result: yes
configure:18558: checking sys/times.h usability
configure:18558: gcc -c -g -O2 conftest.c >&5
configure:18558: $? = 0
configure:18558: result: yes
configure:18558: checking sys/times.h presence
configure:18558: gcc -E conftest.c
configure:18558: $? = 0
configure:18558: result: yes
configure:18558: checking for sys/times.h
configure:18558: result: yes
configure:18570: checking malloc.h usability
configure:18570: gcc -c -g -O2 conftest.c >&5
configure:18570: $? = 0
configure:18570: result: yes
configure:18570: checking malloc.h presence
configure:18570: gcc -E conftest.c
configure:18570: $? = 0
configure:18570: result: yes
configure:18570: checking for malloc.h
configure:18570: result: yes
configure:18582: checking glob.h usability
configure:18582: gcc -c -g -O2 conftest.c >&5
configure:18582: $? = 0
configure:18582: result: yes
configure:18582: checking glob.h presence
configure:18582: gcc -E conftest.c
configure:18582: $? = 0
configure:18582: result: yes
configure:18582: checking for glob.h
configure:18582: result: yes
configure:18594: checking fnmatch.h usability
configure:18594: gcc -c -g -O2 conftest.c >&5
configure:18594: $? = 0
configure:18594: result: yes
configure:18594: checking fnmatch.h presence
configure:18594: gcc -E conftest.c
configure:18594: $? = 0
configure:18594: result: yes
configure:18594: checking for fnmatch.h
configure:18594: result: yes
configure:18606: checking wordexp.h usability
configure:18606: gcc -c -g -O2 conftest.c >&5
configure:18606: $? = 0
configure:18606: result: yes
configure:18606: checking wordexp.h presence
configure:18606: gcc -E conftest.c
configure:18606: $? = 0
configure:18606: result: yes
configure:18606: checking for wordexp.h
configure:18606: result: yes
configure:18618: checking execinfo.h usability
configure:18618: gcc -c -g -O2 conftest.c >&5
configure:18618: $? = 0
configure:18618: result: yes
configure:18618: checking execinfo.h presence
configure:18618: gcc -E conftest.c
configure:18618: $? = 0
configure:18618: result: yes
configure:18618: checking for execinfo.h
configure:18618: result: yes
configure:18632: checking for mallinfo
configure:18632: gcc -o conftest -g -O2 conftest.c >&5
configure:18632: $? = 0
configure:18632: result: yes
configure:18643: checking for backtrace
configure:18643: gcc -o conftest -g -O2 conftest.c >&5
configure:18643: $? = 0
configure:18643: result: yes
configure:18656: checking for getrlimit
configure:18656: gcc -o conftest -g -O2 conftest.c >&5
configure:18656: $? = 0
configure:18656: result: yes
configure:18667: checking for gethostname
configure:18667: gcc -o conftest -g -O2 conftest.c >&5
configure:18667: $? = 0
configure:18667: result: yes
configure:18753: checking for floor in -lm
configure:18778: gcc -o conftest -g -O2 conftest.c -lm >&5
conftest.c:55:6: warning: conflicting types for built-in function 'floor'
char floor ();
^
configure:18778: $? = 0
configure:18787: result: yes
configure:18800: checking whether isnan is declared
configure:18800: gcc -c -g -O2 conftest.c >&5
configure:18800: $? = 0
configure:18800: result: yes
configure:18815: checking for sqrtl
configure:18815: gcc -o conftest -g -O2 conftest.c -lm >&5
conftest.c:73:6: warning: conflicting types for built-in function 'sqrtl'
char sqrtl ();
^
configure:18815: $? = 0
configure:18815: result: yes
configure:18826: checking for feenableexcept
configure:18826: gcc -o conftest -g -O2 conftest.c -lm >&5
configure:18826: $? = 0
configure:18826: result: yes
configure:18836: checking for fenv_t.__control
configure:18836: gcc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:58:12: error: 'fenv_t {aka struct <anonymous>}' has no member named '__control'
if (ac_aggr.__control)
^
configure:18836: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| /* end confdefs.h. */
| #include <fenv.h>
|
| int
| main ()
| {
| static fenv_t ac_aggr;
| if (ac_aggr.__control)
| return 0;
| ;
| return 0;
| }
configure:18836: gcc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:58:19: error: 'fenv_t {aka struct <anonymous>}' has no member named '__control'
if (sizeof ac_aggr.__control)
^
configure:18836: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| /* end confdefs.h. */
| #include <fenv.h>
|
| int
| main ()
| {
| static fenv_t ac_aggr;
| if (sizeof ac_aggr.__control)
| return 0;
| ;
| return 0;
| }
configure:18836: result: no
configure:18846: checking for fenv_t.__mxcsr
configure:18846: gcc -c -g -O2 conftest.c >&5
configure:18846: $? = 0
configure:18846: result: yes
configure:18869: checking for DATA support
configure:18883: result:
configure:19028: checking if compiler needs -Werror to reject unknown flags
configure:19044: gcc -c -g -O2 -fopenmp -Werror -Wunknown-warning-option -Wsizeof-array-argument conftest.c >&5
gcc: error: unrecognized command line option '-Wunknown-warning-option'
configure:19044: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| /* end confdefs.h. */
| int foo(void);
| int
| main ()
| {
| foo()
| ;
| return 0;
| }
configure:19049: result: no
configure:19115: checking for the pthreads library -lpthreads
configure:19153: gcc -o conftest -g -O2 -fopenmp conftest.c -lpthreads -lm >&5
/usr/bin/ld: cannot find -lpthreads
collect2: error: ld returned 1 exit status
configure:19153: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| /* end confdefs.h. */
| #include <pthread.h>
| static void routine(void *a) { a = 0; }
| static void *start_routine(void *a) { return a; }
| int
| main ()
| {
| pthread_t th; pthread_attr_t attr;
| pthread_create(&th, 0, start_routine, 0);
| pthread_join(th, 0);
| pthread_attr_init(&attr);
| pthread_cleanup_push(routine, 0);
| pthread_cleanup_pop(0) /* ; */
| ;
| return 0;
| }
configure:19162: result: no
configure:19060: checking whether pthreads work without any flags
configure:19153: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
configure:19153: $? = 0
configure:19162: result: yes
configure:19181: checking for joinable pthread attribute
configure:19196: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
configure:19196: $? = 0
configure:19202: result: PTHREAD_CREATE_JOINABLE
configure:19212: checking if more special flags are required for pthreads
configure:19227: result: no
configure:19233: checking for PTHREAD_PRIO_INHERIT
configure:19250: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
configure:19250: $? = 0
configure:19259: result: yes
configure:19608: checking for szlib library
configure:19610: result: suppressed
configure:19776: checking hdf5.h usability
configure:19776: gcc -c -g -O2 -fopenmp -I/usr/local/include conftest.c >&5
configure:19776: $? = 0
configure:19776: result: yes
configure:19776: checking hdf5.h presence
configure:19776: gcc -E -I/usr/local/include conftest.c
configure:19776: $? = 0
configure:19776: result: yes
configure:19776: checking for hdf5.h
configure:19776: result: yes
configure:19786: checking for library containing H5Fopen
configure:19817: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
/tmp/ccSNpH43.o: In function `main':
/home/winash12/meteorology_project/cdo-1.9.1/conftest.c:68: undefined reference to `H5Fopen'
collect2: error: ld returned 1 exit status
configure:19817: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| #define HAVE_PTHREAD_PRIO_INHERIT 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5Fopen ();
| int
| main ()
| {
| return H5Fopen ();
| ;
| return 0;
| }
configure:19817: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lhdf5 -lm >&5
configure:19817: $? = 0
configure:19834: result: -lhdf5
configure:19846: checking for library containing H5DSis_scale
configure:19877: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lhdf5 -lm >&5
/tmp/cca3X2pa.o: In function `main':
/home/winash12/meteorology_project/cdo-1.9.1/conftest.c:69: undefined reference to `H5DSis_scale'
collect2: error: ld returned 1 exit status
configure:19877: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| #define HAVE_PTHREAD_PRIO_INHERIT 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5DSis_scale ();
| int
| main ()
| {
| return H5DSis_scale ();
| ;
| return 0;
| }
configure:19877: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lhdf5_hl -lhdf5 -lm >&5
configure:19877: $? = 0
configure:19894: result: -lhdf5_hl
configure:20121: checking netcdf.h usability
configure:20121: gcc -c -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include conftest.c >&5
configure:20121: $? = 0
configure:20121: result: yes
configure:20121: checking netcdf.h presence
configure:20121: gcc -E -I/usr/local/include -I/usr/local/include conftest.c
configure:20121: $? = 0
configure:20121: result: yes
configure:20121: checking for netcdf.h
configure:20121: result: yes
configure:20131: checking for library containing nc_open
configure:20162: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include -L/usr/local/lib -L/usr/local/lib conftest.c -lhdf5_hl -lhdf5 -lm >&5
/tmp/ccU1giGe.o: In function `main':
/home/winash12/meteorology_project/cdo-1.9.1/conftest.c:70: undefined reference to `nc_open'
collect2: error: ld returned 1 exit status
configure:20162: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| #define HAVE_PTHREAD_PRIO_INHERIT 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_NETCDF_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char nc_open ();
| int
| main ()
| {
| return nc_open ();
| ;
| return 0;
| }
configure:20162: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include -L/usr/local/lib -L/usr/local/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
configure:20162: $? = 0
configure:20179: result: -lnetcdf
configure:20194: checking nc-config script
configure:20198: checking for nc-config
configure:20214: found /usr/local/bin/nc-config
configure:20225: result: /usr/local/bin/nc-config
configure:20234: checking netcdf's OpenDAP support
configure:20240: result: yes
configure:20246: checking netcdf's nc2 support
configure:20253: result: yes
configure:20259: checking netcdf's nc4 support
configure:20266: result: yes
configure:20272: checking netcdf's nc4/hdf5 support
configure:20279: result: yes
configure:20305: checking for library containing H5TS_mutex_lock
configure:20336: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include -L/usr/local/lib -L/usr/local/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
/tmp/ccMPq8qm.o: In function `main':
/home/winash12/meteorology_project/cdo-1.9.1/conftest.c:75: undefined reference to `H5TS_mutex_lock'
collect2: error: ld returned 1 exit status
configure:20336: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| #define HAVE_PTHREAD_PRIO_INHERIT 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_NETCDF_H 1
| #define HAVE_LIBNETCDF 1
| #define HAVE_LIBNC_DAP 1
| #define HAVE_NETCDF2 1
| #define HAVE_NETCDF4 1
| #define HAVE_NC4HDF5 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5TS_mutex_lock ();
| int
| main ()
| {
| return H5TS_mutex_lock ();
| ;
| return 0;
| }
configure:20336: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include -L/usr/local/lib -L/usr/local/lib conftest.c -lnetcdf -lhdf5 -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
/tmp/ccKfHn3l.o: In function `main':
/home/winash12/meteorology_project/cdo-1.9.1/conftest.c:75: undefined reference to `H5TS_mutex_lock'
collect2: error: ld returned 1 exit status
configure:20336: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.9.1"
| #define PACKAGE_STRING "cdo 1.9.1"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.9.1"
| #define PACKAGE "cdo"
| #define VERSION "1.9.1"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define restrict __restrict
| #define HAVE_CXX11 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_FNMATCH_H 1
| #define HAVE_WORDEXP_H 1
| #define HAVE_EXECINFO_H 1
| #define HAVE_MALLINFO 1
| #define HAVE_BACKTRACE 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETHOSTNAME 1
| #define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
| #define USER_NAME "root"
| #define HOST_NAME "winash12-OptiPlex-7050"
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
| #define HAVE_LIBM 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_SQRTL 1
| #define HAVE_FEENABLEEXCEPT 1
| #define HAVE_FENV_T___MXCSR 1
| #define ENABLE_DATA 1
| #define HAVE_PTHREAD_PRIO_INHERIT 1
| #define HAVE_LIBPTHREAD 1
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_NETCDF_H 1
| #define HAVE_LIBNETCDF 1
| #define HAVE_LIBNC_DAP 1
| #define HAVE_NETCDF2 1
| #define HAVE_NETCDF4 1
| #define HAVE_NC4HDF5 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5TS_mutex_lock ();
| int
| main ()
| {
| return H5TS_mutex_lock ();
| ;
| return 0;
| }
configure:20353: result: no
configure:20560: checking for the UDUNITS2 library
configure:20562: result: suppressed
configure:20726: checking for the CMOR library
configure:20728: result: suppressed
configure:20908: checking for the ECCODES library
configure:20910: result: suppressed
configure:21092: checking for the GRIB_API library
configure:21094: result: suppressed
configure:21103: checking for GRIB support
configure:21120: result: yes
configure:21126: checking for CGRIBEX support
configure:21143: result: yes
configure:21149: checking for SERVICE support
configure:21166: result: yes
configure:21172: checking for EXTRA support
configure:21189: result: yes
configure:21195: checking for IEG support
configure:21212: result: yes
configure:21218: checking for FFTW3 support
configure:21481: checking for the PROJ library
configure:21483: result: suppressed
configure:21663: checking for the CURL library
configure:21665: result: suppressed
configure:21845: checking for MAGICS library
configure:21847: result: suppressed
configure:22050: checking for XML2 library
configure:22052: result: suppressed
configure:22071: checking for build a separate CDI library and link CDO to it
configure:22088: result: no
configure:22112: checking for building an additional static CDO binary
configure:22125: result: no
configure:22137: checking for HIRLAM extensions
configure:22153: result: no
configure:22173: checking if x86/amd64 assembler speaks SSE4.2
configure:22196: gcc -c -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include conftest.c >&5
configure:22196: $? = 0
configure:22199: result: yes
configure:22224: checking if x86/amd64 assembler speaks AVX
configure:22245: gcc -c -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include conftest.c >&5
configure:22245: $? = 0
configure:22248: result: yes
configure:22273: checking if x86/amd64 assembler speaks AVX2
configure:22294: gcc -c -g -O2 -fopenmp -I/usr/local/include -I/usr/local/include conftest.c >&5
configure:22294: $? = 0
configure:22297: result: yes
configure:22347: checking for gawk
configure:22374: result: mawk
configure:22517: checking that generated files are newer than configure
configure:22523: result: done
configure:22582: creating ./config.status

## ---------------------- ##
## Running config.status. ##
## ---------------------- ##

This file was extended by cdo config.status 1.9.1, which was
generated by GNU Autoconf 2.68. Invocation command line was

CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status

on winash12-OptiPlex-7050

config.status:1324: creating test/File.test
config.status:1324: creating test/Read_grib.test
config.status:1324: creating test/Read_netcdf.test
config.status:1324: creating test/Copy_netcdf.test
config.status:1324: creating test/Comp.test
config.status:1324: creating test/Compc.test
config.status:1324: creating test/Cat.test
config.status:1324: creating test/Gridarea.test
config.status:1324: creating test/Genweights.test
config.status:1324: creating test/Remap.test
config.status:1324: creating test/Remap2.test
config.status:1324: creating test/Remapeta.test
config.status:1324: creating test/EOF.test
config.status:1324: creating test/Select.test
config.status:1324: creating test/Spectral.test
config.status:1324: creating test/Vertint.test
config.status:1324: creating test/Timstat.test
config.status:1324: creating test/Timselstat.test
config.status:1324: creating test/Seasstat.test
config.status:1324: creating test/Runstat.test
config.status:1324: creating test/Multiyearstat.test
config.status:1324: creating test/Ydrunstat.test
config.status:1324: creating test/Gridboxstat.test
config.status:1324: creating test/Vertstat.test
config.status:1324: creating test/Fldstat.test
config.status:1324: creating test/Fldpctl.test
config.status:1324: creating test/Ensstat.test
config.status:1324: creating test/Enspctl.test
config.status:1324: creating test/Merstat.test
config.status:1324: creating test/Zonstat.test
config.status:1324: creating test/Mergetime.test
config.status:1324: creating test/Afterburner.test
config.status:1324: creating test/Detrend.test
config.status:1324: creating test/Arithc.test
config.status:1324: creating test/Arith.test
config.status:1324: creating test/Expr.test
config.status:1324: creating test/Gradsdes.test
config.status:1324: creating test/Collgrid.test
config.status:1324: creating test/threads.test
config.status:1324: creating test/tsformat.test
config.status:1324: creating test/wildcard.test
config.status:1324: creating test/MapReduce.test
config.status:1324: creating test/Ninfo.test
config.status:1324: creating Makefile
config.status:1324: creating src/Makefile
config.status:1324: creating contrib/Makefile
config.status:1324: creating test/Makefile
config.status:1324: creating test/data/Makefile
config.status:1324: creating cdo.spec
config.status:1324: creating cdo.settings
config.status:1324: creating src/config.h
config.status:1553: executing depfiles commands
config.status:1553: executing libtool commands
configure:25241: === configuring in libcdi (/home/winash12/meteorology_project/cdo-1.9.1/libcdi)
configure:25304: running /bin/bash ./configure --disable-option-checking '--prefix=/usr/local' '--with-netcdf=/usr/local' '--with-hdf5=/usr/local' '--with-grib_spi=/usr/local' --cache-file=/dev/null --srcdir=.
configure:25323: CDO is configured with the following options:
configure:25342:

Configuration completed.

You can now say 'make' to compile the CDO package and 'make install' to install it afterwards.


## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_c_restrict=__restrict
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_func_backtrace=yes
ac_cv_func_feenableexcept=yes
ac_cv_func_gethostname=yes
ac_cv_func_getpagesize=yes
ac_cv_func_getrlimit=yes
ac_cv_func_mallinfo=yes
ac_cv_func_mmap_fixed_mapped=yes
ac_cv_func_sqrtl=yes
ac_cv_have_decl_isnan=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_execinfo_h=yes
ac_cv_header_fnmatch_h=yes
ac_cv_header_glob_h=yes
ac_cv_header_hdf5_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_malloc_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_netcdf_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_wordexp_h=yes
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_lib_m_floor=yes
ac_cv_lib_malloc_malloc=no
ac_cv_member_fenv_t___control=no
ac_cv_member_fenv_t___mxcsr=yes
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_FGREP='/bin/grep -F'
ac_cv_path_GREP=/bin/grep
ac_cv_path_SED=/bin/sed
ac_cv_path_ac_pt_BASH=/bin/bash
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=mawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_NC_CONFIG=/usr/local/bin/nc-config
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_AS=as
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_DLLTOOL=false
ac_cv_prog_ac_ct_LD='/usr/bin/ld -m elf_x86_64'
ac_cv_prog_ac_ct_MANIFEST_TOOL=mt
ac_cv_prog_ac_ct_NM='/usr/bin/nm -B'
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=-fopenmp
ac_cv_prog_cc_c89=
ac_cv_prog_cc_c99=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_search_H5DSis_scale=-lhdf5_hl
ac_cv_search_H5Fopen=-lhdf5
ac_cv_search_H5TS_mutex_lock=no
ac_cv_search_nc_open=-lnetcdf
ac_cv_sys_file_offset_bits=no
ac_cv_sys_largefile_CC=no
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_ar_interface=ar
am_cv_make_support_nested_variables=yes
am_cv_prog_cc_c_o=yes
ax_cv_PTHREAD_PRIO_INHERIT=yes
ax_cv_cxx_compile_cxx11=no
ax_cv_cxx_compile_cxx11__std_gnupp11=yes
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_shlibpath_overrides_runpath=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/missing aclocal-1.14'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_CPPFLAGS=''
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR='ar'
AS='as'
AUTOCONF='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/missing autoconf'
AUTOHEADER='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/missing autoheader'
AUTOMAKE='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/missing automake-1.14'
AWK='mawk'
BASH='/bin/bash'
BUILD_AVX2_TESTS_FALSE='#'
BUILD_AVX2_TESTS_TRUE=''
BUILD_AVX_TESTS_FALSE='#'
BUILD_AVX_TESTS_TRUE=''
BUILD_SSE42_TESTS_FALSE='#'
BUILD_SSE42_TESTS_TRUE=''
CC='gcc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2 -fopenmp '
CLDFLAGS=''
CLIBS=''
CMOR_LIBS=''
CPP='gcc -E'
CPPFLAGS='-I/usr/local/include -I/usr/local/include '
CURL_INCLUDE=''
CURL_LDFLAGS=''
CXX='g++ -std=gnu++11'
CXXCPP='g++ -E -std=gnu++11'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2 -fopenmp '
CYGPATH_W='echo'
DEFS='-DHAVE_CONFIG_H'
DEPDIR='.deps'
DLLTOOL='false'
DSYMUTIL=''
DUMPBIN=''
ECCODES_INCLUDE=''
ECCODES_LIBS=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE='#'
ENABLE_CDI_LIB='false'
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE='#'
ENABLE_CGRIBEX='yes'
ENABLE_DATA=''
ENABLE_EXTRA='yes'
ENABLE_GRIB='yes'
ENABLE_GRIBAPI='no'
ENABLE_HIRLAM_EXTENSIONS_FALSE=''
ENABLE_HIRLAM_EXTENSIONS_TRUE='#'
ENABLE_IEG='yes'
ENABLE_MAGICS_FALSE=''
ENABLE_MAGICS_TRUE='#'
ENABLE_NC2='yes'
ENABLE_NC4='yes'
ENABLE_NC4HDF5='yes'
ENABLE_NETCDF='yes'
ENABLE_SERVICE='yes'
ENABLE_THREADS='yes'
EXEEXT=''
FCFLAGS=''
FGREP='/bin/grep -F'
GREP='/bin/grep'
GRIB_API_INCLUDE=''
GRIB_API_LIBS=''
HAVE_CXX11='1'
HDF5_INCLUDE=' -I/usr/local/include'
HDF5_LIBS=' -L/usr/local/lib -lhdf5'
HDF5_ROOT='/usr/local'
HOST_NAME='winash12-OptiPlex-7050'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/bin/ld -m elf_x86_64'
LDFLAGS='-L/usr/local/lib -L/usr/local/lib '
LIBOBJS=''
LIBS='-lnetcdf -lhdf5_hl -lhdf5 -lm '
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
MAGICS_INCLUDE=''
MAGICS_LIBS=''
MAGICS_ROOT=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/missing makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/bin/mkdir -p'
NC_CONFIG='/usr/local/bin/nc-config'
NETCDF_INCLUDE=' -I/usr/local/include'
NETCDF_LIBS=' -L/usr/local/lib -lnetcdf'
NETCDF_ROOT='/usr/local'
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJEXT='o'
OPENMP_CFLAGS='-fopenmp'
OTOOL64=''
OTOOL=''
PACKAGE='cdo'
PACKAGE_BUGREPORT='http://mpimet.mpg.de/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 1.9.1'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='1.9.1'
PATH_SEPARATOR=':'
PROJ_INCLUDE=''
PROJ_LDFLAGS=''
PTHREAD_CC='gcc'
PTHREAD_CFLAGS=''
PTHREAD_LIBS=''
RANLIB='ranlib'
SED='/bin/sed'
SET_MAKE=''
SHELL='/bin/bash'
STRIP='strip'
SYSTEM_TYPE='x86_64-unknown-linux-gnu'
SZLIB_INCLUDE=''
SZLIB_LIBS=''
THREADS_INCLUDE=''
THREADS_LIBS=''
UDUNITS_INCLUDE=''
UDUNITS_LDFLAGS=''
USER_NAME='root'
VERSION='1.9.1'
XML2_LIBS=''
ac_ct_AR='ar'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE='#'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
ax_pthread_config=''
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/winash12/meteorology_project/cdo-1.9.1/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=' libcdi'
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "1.9.1"
#define PACKAGE_STRING "cdo 1.9.1"
#define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
#define PACKAGE_URL ""
#define CDO "1.9.1"
#define PACKAGE "cdo"
#define VERSION "1.9.1"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define restrict __restrict
#define HAVE_CXX11 1
#define HAVE_STDLIB_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_GETPAGESIZE 1
#define HAVE_MMAP 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_MALLOC_H 1
#define HAVE_GLOB_H 1
#define HAVE_FNMATCH_H 1
#define HAVE_WORDEXP_H 1
#define HAVE_EXECINFO_H 1
#define HAVE_MALLINFO 1
#define HAVE_BACKTRACE 1
#define HAVE_GETRLIMIT 1
#define HAVE_GETHOSTNAME 1
#define CXX_VERSION "g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
#define C_VERSION "gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609"
#define USER_NAME "root"
#define HOST_NAME "winash12-OptiPlex-7050"
#define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
#define HAVE_LIBM 1
#define HAVE_DECL_ISNAN 1
#define HAVE_SQRTL 1
#define HAVE_FEENABLEEXCEPT 1
#define HAVE_FENV_T___MXCSR 1
#define ENABLE_DATA 1
#define HAVE_PTHREAD_PRIO_INHERIT 1
#define HAVE_LIBPTHREAD 1
#define HAVE_HDF5_H 1
#define HAVE_LIBHDF5 1
#define HAVE_NETCDF_H 1
#define HAVE_LIBNETCDF 1
#define HAVE_LIBNC_DAP 1
#define HAVE_NETCDF2 1
#define HAVE_NETCDF4 1
#define HAVE_NC4HDF5 1
#define HAVE_LIBGRIB 1
#define HAVE_LIBCGRIBEX 1
#define HAVE_LIBSERVICE 1
#define HAVE_LIBEXTRA 1
#define HAVE_LIBIEG 1
#define C_COMPILER "gcc -g -O2 -fopenmp "
#define CXX_COMPILER "g++ -std=gnu++11 -g -O2 -fopenmp "

configure: exit 0
(1-1/2)