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Problem with "shifttime" command and half-hourly to daily... ยป sinfo_log.txt

david Stevens, 2017-11-17 19:35

 
Warning! ***HDF5 library version mismatched error***
The HDF5 header files used to compile this application do not match
the version used by the HDF5 library to which this application is linked.
Data corruption or segmentation faults may occur if the application continues.
This can happen when an application was compiled by one version of HDF5 but
linked with a different version of static or shared HDF5 library.
You should recompile the application or check your shared library related
settings such as 'LD_LIBRARY_PATH'.
'HDF5_DISABLE_VERSION_CHECK' environment variable is set to 1, application will
continue at your own risk.
Headers are 1.8.19, library is 1.8.15
SUMMARY OF THE HDF5 CONFIGURATION
=================================

General Information:
-------------------
HDF5 Version: 1.8.15
Configured on: Tue Oct 18 21:16:10 UTC 2016
Configured by: abuild@build83
Configure mode: production
Host system: x86_64-suse-linux-gnu
Uname information: Linux build83 4.4.24-1-default #1 SMP Wed Oct 12 14:23:39 UTC 2016 (1288c77) x86_64 x86_64 x86_64 GNU/Linux
Byte sex: little-endian
Libraries: static, shared
Installation point: /usr

Compiling Options:
------------------
Compilation Mode: production
C Compiler: /usr/bin/gcc
CFLAGS: -fmessage-length=0 -grecord-gcc-switches -O0 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables -g
H5_CFLAGS: -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wstrict-overflow -Wlogical-op -Wlarger-than=2048 -Wvla -Wsync-nand -Wframe-larger-than=16384 -Wpacked-bitfield-compat -Wstrict-overflow=5 -Wjump-misses-init -Wunsuffixed-float-constants -Wdouble-promotion -Wsuggest-attribute=const -Wtrampolines -Wstack-usage=8192 -Wvector-operation-performance -Wsuggest-attribute=pure -Wsuggest-attribute=noreturn -Wsuggest-attribute=format -O3 -fomit-frame-pointer -finline-functions
AM_CFLAGS:
CPPFLAGS:
H5_CPPFLAGS: -D_DEFAULT_SOURCE -D_BSD_SOURCE -D_GNU_SOURCE -D_POSIX_C_SOURCE=200112L -DNDEBUG -UH5_DEBUG_API
AM_CPPFLAGS: -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
Shared C Library: yes
Static C Library: yes
Statically Linked Executables: no
LDFLAGS:
H5_LDFLAGS:
AM_LDFLAGS:
Extra libraries: -lpthread -lz -ldl -lm
Archiver: ar
Ranlib: ranlib
Debugged Packages:
API Tracing: no

Languages:
----------
Fortran: yes
Fortran Compiler: /usr/bin/gfortran
Fortran 2003 Compiler: yes
Fortran Flags:
H5 Fortran Flags:
AM Fortran Flags:
Shared Fortran Library: yes
Static Fortran Library: yes

C++: yes
C++ Compiler: /usr/bin/g++
C++ Flags: -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables -g
H5 C++ Flags:
AM C++ Flags:
Shared C++ Library: yes
Static C++ Library: yes

Features:
---------
Parallel HDF5: no
High Level library: yes
Threadsafety: yes
Default API Mapping: v18
With Deprecated Public Symbols: yes
I/O filters (external): deflate(zlib)
MPE: no
Direct VFD: no
dmalloc: no
Clear file buffers before write: yes
Using memory checker: no
Function Stack Tracing: no
Strict File Format Checks: no
Optimization Instrumentation: no
Warning (cdf_scan_var_attr) : NetCDF: Variable not found - y
Warning (cdf_scan_var_attr) : NetCDF: Variable not found - x
File format : NetCDF4
-1 : Institut Source Steptype Levels Num Points Num Dtype : Parameter ID
1 : unknown unknown instant 1 1 1 1 F32 : -1
2 : unknown unknown instant 1 1 1 1 F32 : -2
3 : unknown unknown instant 1 1 1 1 F32 : -3
4 : unknown unknown instant 1 1 1 1 F32 : -4
5 : unknown unknown instant 1 1 1 1 F32 : -5
6 : unknown unknown instant 1 1 1 1 F32 : -6
7 : unknown unknown instant 1 1 1 1 F32 : -7
8 : unknown unknown instant 1 1 1 1 F32 : -8
9 : unknown unknown instant 1 1 1 1 F32 : -9
10 : unknown unknown constant 1 1 1 2 F64 : -10
11 : unknown unknown constant 1 1 1 3 F64 : -11
12 : unknown unknown instant 1 1 1 4 I32 : -12
13 : unknown unknown constant 4 2 1 1 F32 : -13
14 : unknown unknown constant 4 2 1 1 F32 : -14
15 : unknown unknown constant 4 2 1 1 F32 : -15
16 : unknown unknown constant 4 2 1 1 F32 : -16
17 : unknown unknown instant 1 1 1 1 F32 : -17
18 : unknown unknown instant 1 1 1 1 F32 : -18
19 : unknown unknown instant 1 1 1 1 F32 : -19
20 : unknown unknown instant 1 1 1 1 F32 : -20
21 : unknown unknown instant 1 1 1 1 F32 : -21
22 : unknown unknown instant 1 1 1 1 F32 : -22
23 : unknown unknown instant 1 1 1 1 F32 : -23
24 : unknown unknown instant 1 1 1 1 F32 : -24
25 : unknown unknown instant 1 1 1 1 F32 : -25
26 : unknown unknown instant 1 1 1 1 F32 : -26
27 : unknown unknown instant 1 1 1 1 F32 : -27
28 : unknown unknown instant 1 1 1 1 F32 : -28
29 : unknown unknown instant 1 1 1 1 F32 : -29
30 : unknown unknown instant 1 1 1 1 F32 : -30
31 : unknown unknown instant 1 1 1 1 F32 : -31
32 : unknown unknown instant 1 1 1 1 F32 : -32
33 : unknown unknown instant 1 1 1 1 F32 : -33
34 : unknown unknown instant 1 1 1 1 F32 : -34
35 : unknown unknown instant 1 1 1 1 F32 : -35
36 : unknown unknown instant 1 1 1 1 F32 : -36
37 : unknown unknown instant 1 1 1 1 F32 : -37
38 : unknown unknown instant 1 1 1 1 F32 : -38
39 : unknown unknown instant 1 1 1 1 F32 : -39
40 : unknown unknown instant 1 1 1 1 F32 : -40
41 : unknown unknown instant 1 1 1 1 F32 : -41
42 : unknown unknown instant 1 1 1 1 F32 : -42
43 : unknown unknown instant 1 1 1 1 F32 : -43
44 : unknown unknown instant 1 1 1 1 F32 : -44
45 : unknown unknown instant 1 1 1 1 F32 : -45
46 : unknown unknown instant 1 1 1 1 F32 : -46
47 : unknown unknown instant 4 2 1 1 F32 : -47
48 : unknown unknown instant 4 2 1 1 F32 : -48
49 : unknown unknown instant 1 1 1 1 F32 : -49
50 : unknown unknown instant 1 1 1 1 F32 : -50
51 : unknown unknown instant 1 1 1 1 F32 : -51
52 : unknown unknown instant 1 1 1 1 F32 : -52
53 : unknown unknown instant 1 1 1 1 F32 : -53
54 : unknown unknown instant 4 2 1 1 F32 : -54
55 : unknown unknown instant 1 1 1 1 F32 : -55
56 : unknown unknown instant 1 1 1 1 F32 : -56
57 : unknown unknown instant 1 1 1 1 F32 : -57
58 : unknown unknown instant 1 1 1 1 F32 : -58
59 : unknown unknown instant 1 1 1 1 F32 : -59
60 : unknown unknown instant 1 1 1 1 F32 : -60
61 : unknown unknown instant 1 1 1 1 F32 : -61
62 : unknown unknown instant 1 1 1 1 F32 : -62
63 : unknown unknown instant 1 1 1 1 F32 : -63
64 : unknown unknown instant 1 1 1 1 F32 : -64
65 : unknown unknown instant 1 1 1 1 F32 : -65
66 : unknown unknown instant 1 1 1 1 F32 : -66
67 : unknown unknown instant 1 1 1 1 F32 : -67
68 : unknown unknown instant 1 1 1 1 F32 : -68
69 : unknown unknown instant 1 1 1 1 F32 : -69
70 : unknown unknown instant 1 1 1 1 F32 : -70
71 : unknown unknown instant 1 1 1 1 F32 : -71
72 : unknown unknown instant 1 1 1 1 F32 : -72
73 : unknown unknown instant 1 1 1 1 F32 : -73
Grid coordinates :
1 : generic : points=1 (1x1)
2 : generic : points=1
3 : generic : points=1
4 : generic : points=1
Vertical coordinates :
1 : surface : levels=1
2 : generic : levels=4
nlevs : 0.035 to 1.945 m
Time coordinate : 70084 steps
RefTime = 2003-01-01 00:00:00 Units = seconds Calendar = standard
YYYY-MM-DD hh:mm:ss YYYY-MM-DD hh:mm:ss YYYY-MM-DD hh:mm:ss YYYY-MM-DD hh:mm:ss
2003-01-01 00:00:00 2003-01-01 00:30:00 2003-01-01 01:00:00 2003-01-01 01:30:00
2003-01-01 02:00:00 2003-01-01 02:30:00 2003-01-01 03:00:00 2003-01-01 03:30:00
2003-01-01 04:00:00 2003-01-01 04:30:00 2003-01-01 05:00:00 2003-01-01 05:30:00
2003-01-01 06:00:00 2003-01-01 06:30:00 2003-01-01 07:00:00 2003-01-01 07:30:00
2003-01-01 08:00:00 2003-01-01 08:30:00 2003-01-01 09:00:00 2003-01-01 09:30:00
2003-01-01 10:00:00 2003-01-01 10:30:00 2003-01-01 11:00:00 2003-01-01 11:30:00
2003-01-01 12:00:00 2003-01-01 12:30:00 2003-01-01 13:00:00 2003-01-01 13:30:00
2003-01-01 14:00:00 2003-01-01 14:30:00 2003-01-01 15:00:00 2003-01-01 15:30:00
2003-01-01 16:00:00 2003-01-01 16:30:00 2003-01-01 17:00:00 2003-01-01 17:30:00
2003-01-01 18:00:00 2003-01-01 18:30:00 2003-01-01 19:00:00 2003-01-01 19:30:00
2003-01-01 20:00:00 2003-01-01 20:30:00 2003-01-01 21:00:00 2003-01-01 21:30:00
2003-01-01 22:00:00 2003-01-01 22:30:00 2003-01-01 23:00:00 2003-01-01 23:30:00
2003-01-02 00:00:00 2003-01-02 00:30:00 2003-01-02 01:00:00 2003-01-02 01:30:00
2003-01-02 02:00:00 2003-01-02 02:30:00 2003-01-02 03:00:00 2003-01-02 03:30:00
2003-01-02 04:00:00 2003-01-02 04:30:00 2003-01-02 05:00:00 2003-01-02 05:30:00
................................................................................
................................................................................
................................................................................
..............................................................cdo sinfo: Processed 73 variables over 70084 timesteps ( 8.22s )

2006-12-29 18:30:04 2006-12-29 18:59:56 2006-12-29 19:30:04 2006-12-29 19:59:56
2006-12-29 20:30:04 2006-12-29 20:59:56 2006-12-29 21:30:04 2006-12-29 21:59:56
2006-12-29 22:30:04 2006-12-29 22:59:56 2006-12-29 23:30:04 2006-12-29 23:59:56
2006-12-30 00:30:04 2006-12-30 00:59:56 2006-12-30 01:30:04 2006-12-30 01:59:56
2006-12-30 02:30:04 2006-12-30 02:59:56 2006-12-30 03:30:04 2006-12-30 03:59:56
2006-12-30 04:30:04 2006-12-30 04:59:56 2006-12-30 05:30:04 2006-12-30 05:59:56
2006-12-30 06:30:04 2006-12-30 06:59:56 2006-12-30 07:30:04 2006-12-30 07:59:56
2006-12-30 08:30:04 2006-12-30 08:59:56 2006-12-30 09:30:04 2006-12-30 09:59:56
2006-12-30 10:30:04 2006-12-30 10:59:56 2006-12-30 11:30:04 2006-12-30 11:59:56
2006-12-30 12:30:04 2006-12-30 12:59:56 2006-12-30 13:30:04 2006-12-30 13:59:56
2006-12-30 14:30:04 2006-12-30 14:59:56 2006-12-30 15:30:04 2006-12-30 15:59:56
2006-12-30 16:30:04 2006-12-30 16:59:56 2006-12-30 17:30:04 2006-12-30 17:59:56
2006-12-30 18:30:04 2006-12-30 18:59:56 2006-12-30 19:30:04 2006-12-30 19:59:56
2006-12-30 20:30:04 2006-12-30 20:59:56 2006-12-30 21:30:04 2006-12-30 21:59:56
2006-12-30 22:30:04 2006-12-30 22:59:56 2006-12-30 23:30:04 2006-12-30 23:59:56
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