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This file contains any messages produced by compilers while
|
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running configure, to aid debugging if configure makes a mistake.
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|
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It was created by cdo configure 1.7.2, which was
|
|
generated by GNU Autoconf 2.68. Invocation command line was
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|
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$ ./configure --with-netcdf=/usr/local/ --with-jasper=/usr/local/ --with-hdf5=/usr/local/ --with-grib_api=/usr/local/ --with-proj=/usr/local/ --with-jpeg=/usr/local/ --prefix=/usr/local/
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## --------- ##
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## Platform. ##
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## --------- ##
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hostname = zeus
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uname -m = x86_64
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|
uname -r = 4.2.0-38-generic
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|
uname -s = Linux
|
|
uname -v = #45-Ubuntu SMP Wed Jun 8 21:21:49 UTC 2016
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/usr/bin/uname -p = unknown
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|
/bin/uname -X = unknown
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|
|
|
/bin/arch = unknown
|
|
/usr/bin/arch -k = unknown
|
|
/usr/convex/getsysinfo = unknown
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|
/usr/bin/hostinfo = unknown
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|
/bin/machine = unknown
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/usr/bin/oslevel = unknown
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/bin/universe = unknown
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PATH: /usr/local/sbin
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PATH: /usr/local/bin
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PATH: /usr/sbin
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PATH: /usr/bin
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PATH: /sbin
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PATH: /bin
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## ----------- ##
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## Core tests. ##
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## ----------- ##
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configure:2602: checking build system type
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configure:2616: result: x86_64-unknown-linux-gnu
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configure:2636: checking host system type
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|
configure:2649: result: x86_64-unknown-linux-gnu
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|
configure:2688: checking for a BSD-compatible install
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|
configure:2756: result: /usr/bin/install -c
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configure:2767: checking whether build environment is sane
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|
configure:2822: result: yes
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|
configure:2973: checking for a thread-safe mkdir -p
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|
configure:3012: result: /bin/mkdir -p
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|
configure:3019: checking for gawk
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|
configure:3049: result: no
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|
configure:3019: checking for mawk
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|
configure:3035: found /usr/bin/mawk
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|
configure:3046: result: mawk
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|
configure:3057: checking whether make sets $(MAKE)
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|
configure:3079: result: yes
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|
configure:3108: checking whether make supports nested variables
|
|
configure:3125: result: yes
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|
configure:3253: checking whether to enable maintainer-specific portions of Makefiles
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|
configure:3262: result: no
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|
configure:3289: checking for style of include used by make
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|
configure:3317: result: GNU
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|
configure:3388: checking for gcc
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|
configure:3404: found /usr/bin/gcc
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|
configure:3415: result: gcc
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configure:3644: checking for C compiler version
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configure:3653: gcc --version >&5
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gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010
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Copyright (C) 2015 Free Software Foundation, Inc.
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This is free software; see the source for copying conditions. There is NO
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warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
|
|
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configure:3664: $? = 0
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|
configure:3653: gcc -v >&5
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|
Using built-in specs.
|
|
COLLECT_GCC=gcc
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COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
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Target: x86_64-linux-gnu
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|
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.2.1-22ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
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Thread model: posix
|
|
gcc version 5.2.1 20151010 (Ubuntu 5.2.1-22ubuntu2)
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|
configure:3664: $? = 0
|
|
configure:3653: gcc -V >&5
|
|
gcc: error: unrecognized command line option '-V'
|
|
gcc: fatal error: no input files
|
|
compilation terminated.
|
|
configure:3664: $? = 1
|
|
configure:3653: gcc -qversion >&5
|
|
gcc: error: unrecognized command line option '-qversion'
|
|
gcc: fatal error: no input files
|
|
compilation terminated.
|
|
configure:3664: $? = 1
|
|
configure:3684: checking whether the C compiler works
|
|
configure:3706: gcc conftest.c >&5
|
|
configure:3710: $? = 0
|
|
configure:3758: result: yes
|
|
configure:3761: checking for C compiler default output file name
|
|
configure:3763: result: a.out
|
|
configure:3769: checking for suffix of executables
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|
configure:3776: gcc -o conftest conftest.c >&5
|
|
configure:3780: $? = 0
|
|
configure:3802: result:
|
|
configure:3824: checking whether we are cross compiling
|
|
configure:3832: gcc -o conftest conftest.c >&5
|
|
configure:3836: $? = 0
|
|
configure:3843: ./conftest
|
|
configure:3847: $? = 0
|
|
configure:3862: result: no
|
|
configure:3867: checking for suffix of object files
|
|
configure:3889: gcc -c conftest.c >&5
|
|
configure:3893: $? = 0
|
|
configure:3914: result: o
|
|
configure:3918: checking whether we are using the GNU C compiler
|
|
configure:3937: gcc -c conftest.c >&5
|
|
configure:3937: $? = 0
|
|
configure:3946: result: yes
|
|
configure:3955: checking whether gcc accepts -g
|
|
configure:3975: gcc -c -g conftest.c >&5
|
|
configure:3975: $? = 0
|
|
configure:4016: result: yes
|
|
configure:4033: checking for gcc option to accept ISO C89
|
|
configure:4097: gcc -c -g -O2 conftest.c >&5
|
|
configure:4097: $? = 0
|
|
configure:4110: result: none needed
|
|
configure:4135: checking whether gcc understands -c and -o together
|
|
configure:4157: gcc -c conftest.c -o conftest2.o
|
|
configure:4160: $? = 0
|
|
configure:4157: gcc -c conftest.c -o conftest2.o
|
|
configure:4160: $? = 0
|
|
configure:4172: result: yes
|
|
configure:4191: checking dependency style of gcc
|
|
configure:4302: result: gcc3
|
|
configure:4367: checking for ar
|
|
configure:4383: found /usr/bin/ar
|
|
configure:4394: result: ar
|
|
configure:4420: checking the archiver (ar) interface
|
|
configure:4436: gcc -c -g -O2 conftest.c >&5
|
|
configure:4436: $? = 0
|
|
configure:4438: ar cru libconftest.a conftest.o >&5
|
|
ar: `u' modifier ignored since `D' is the default (see `U')
|
|
configure:4441: $? = 0
|
|
configure:4469: result: ar
|
|
configure:4490: setting up libtool
|
|
configure:4538: checking how to print strings
|
|
configure:4565: result: printf
|
|
configure:4586: checking for a sed that does not truncate output
|
|
configure:4650: result: /bin/sed
|
|
configure:4668: checking for grep that handles long lines and -e
|
|
configure:4726: result: /bin/grep
|
|
configure:4731: checking for egrep
|
|
configure:4793: result: /bin/grep -E
|
|
configure:4798: checking for fgrep
|
|
configure:4860: result: /bin/grep -F
|
|
configure:4895: checking for ld used by gcc
|
|
configure:4962: result: /usr/bin/ld
|
|
configure:4969: checking if the linker (/usr/bin/ld) is GNU ld
|
|
configure:4984: result: yes
|
|
configure:4996: checking for BSD- or MS-compatible name lister (nm)
|
|
configure:5045: result: /usr/bin/nm -B
|
|
configure:5175: checking the name lister (/usr/bin/nm -B) interface
|
|
configure:5182: gcc -c -g -O2 conftest.c >&5
|
|
configure:5185: /usr/bin/nm -B "conftest.o"
|
|
configure:5188: output
|
|
0000000000000000 B some_variable
|
|
configure:5195: result: BSD nm
|
|
configure:5198: checking whether ln -s works
|
|
configure:5202: result: yes
|
|
configure:5210: checking the maximum length of command line arguments
|
|
configure:5340: result: 1572864
|
|
configure:5357: checking whether the shell understands some XSI constructs
|
|
configure:5367: result: yes
|
|
configure:5371: checking whether the shell understands "+="
|
|
configure:5377: result: yes
|
|
configure:5412: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format
|
|
configure:5452: result: func_convert_file_noop
|
|
configure:5459: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format
|
|
configure:5479: result: func_convert_file_noop
|
|
configure:5486: checking for /usr/bin/ld option to reload object files
|
|
configure:5493: result: -r
|
|
configure:5567: checking for objdump
|
|
configure:5583: found /usr/bin/objdump
|
|
configure:5594: result: objdump
|
|
configure:5626: checking how to recognize dependent libraries
|
|
configure:5828: result: pass_all
|
|
configure:5913: checking for dlltool
|
|
configure:5943: result: no
|
|
configure:5973: checking how to associate runtime and link libraries
|
|
configure:6000: result: printf %s\n
|
|
configure:6124: checking for archiver @FILE support
|
|
configure:6141: gcc -c -g -O2 conftest.c >&5
|
|
configure:6141: $? = 0
|
|
configure:6144: ar cru libconftest.a @conftest.lst >&5
|
|
ar: `u' modifier ignored since `D' is the default (see `U')
|
|
configure:6147: $? = 0
|
|
configure:6152: ar cru libconftest.a @conftest.lst >&5
|
|
ar: `u' modifier ignored since `D' is the default (see `U')
|
|
ar: conftest.o: No such file or directory
|
|
configure:6155: $? = 1
|
|
configure:6167: result: @
|
|
configure:6225: checking for strip
|
|
configure:6241: found /usr/bin/strip
|
|
configure:6252: result: strip
|
|
configure:6324: checking for ranlib
|
|
configure:6340: found /usr/bin/ranlib
|
|
configure:6351: result: ranlib
|
|
configure:6453: checking command to parse /usr/bin/nm -B output from gcc object
|
|
configure:6573: gcc -c -g -O2 conftest.c >&5
|
|
configure:6576: $? = 0
|
|
configure:6580: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
|
|
configure:6583: $? = 0
|
|
configure:6649: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
|
|
configure:6652: $? = 0
|
|
configure:6690: result: ok
|
|
configure:6727: checking for sysroot
|
|
configure:6757: result: no
|
|
configure:6834: gcc -c -g -O2 conftest.c >&5
|
|
configure:6837: $? = 0
|
|
configure:7013: checking for mt
|
|
configure:7029: found /bin/mt
|
|
configure:7040: result: mt
|
|
configure:7063: checking if mt is a manifest tool
|
|
configure:7069: mt '-?'
|
|
configure:7077: result: no
|
|
configure:7719: checking how to run the C preprocessor
|
|
configure:7750: gcc -E conftest.c
|
|
configure:7750: $? = 0
|
|
configure:7764: gcc -E conftest.c
|
|
conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory
|
|
compilation terminated.
|
|
configure:7764: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:7789: result: gcc -E
|
|
configure:7809: gcc -E conftest.c
|
|
configure:7809: $? = 0
|
|
configure:7823: gcc -E conftest.c
|
|
conftest.c:12:28: fatal error: ac_nonexistent.h: No such file or directory
|
|
compilation terminated.
|
|
configure:7823: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:7852: checking for ANSI C header files
|
|
configure:7872: gcc -c -g -O2 conftest.c >&5
|
|
configure:7872: $? = 0
|
|
configure:7945: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:7945: $? = 0
|
|
configure:7945: ./conftest
|
|
configure:7945: $? = 0
|
|
configure:7956: result: yes
|
|
configure:7969: checking for sys/types.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for sys/stat.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for stdlib.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for string.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for memory.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for strings.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for inttypes.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for stdint.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7969: checking for unistd.h
|
|
configure:7969: gcc -c -g -O2 conftest.c >&5
|
|
configure:7969: $? = 0
|
|
configure:7969: result: yes
|
|
configure:7983: checking for dlfcn.h
|
|
configure:7983: gcc -c -g -O2 conftest.c >&5
|
|
configure:7983: $? = 0
|
|
configure:7983: result: yes
|
|
configure:8189: checking for objdir
|
|
configure:8204: result: .libs
|
|
configure:8475: checking if gcc supports -fno-rtti -fno-exceptions
|
|
configure:8493: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
|
|
cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C
|
|
configure:8497: $? = 0
|
|
configure:8510: result: no
|
|
configure:8837: checking for gcc option to produce PIC
|
|
configure:8844: result: -fPIC -DPIC
|
|
configure:8852: checking if gcc PIC flag -fPIC -DPIC works
|
|
configure:8870: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5
|
|
configure:8874: $? = 0
|
|
configure:8887: result: yes
|
|
configure:8916: checking if gcc static flag -static works
|
|
configure:8944: result: yes
|
|
configure:8959: checking if gcc supports -c -o file.o
|
|
configure:8980: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
|
|
configure:8984: $? = 0
|
|
configure:9006: result: yes
|
|
configure:9014: checking if gcc supports -c -o file.o
|
|
configure:9061: result: yes
|
|
configure:9094: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:10247: result: yes
|
|
configure:10284: checking whether -lc should be explicitly linked in
|
|
configure:10292: gcc -c -g -O2 conftest.c >&5
|
|
configure:10295: $? = 0
|
|
configure:10310: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1
|
|
configure:10313: $? = 0
|
|
configure:10327: result: no
|
|
configure:10487: checking dynamic linker characteristics
|
|
configure:10998: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5
|
|
configure:10998: $? = 0
|
|
configure:11220: result: GNU/Linux ld.so
|
|
configure:11327: checking how to hardcode library paths into programs
|
|
configure:11352: result: immediate
|
|
configure:11892: checking whether stripping libraries is possible
|
|
configure:11897: result: yes
|
|
configure:11932: checking if libtool supports shared libraries
|
|
configure:11934: result: yes
|
|
configure:11937: checking whether to build shared libraries
|
|
configure:11958: result: yes
|
|
configure:11961: checking whether to build static libraries
|
|
configure:11965: result: yes
|
|
configure:12047: checking for gcc
|
|
configure:12074: result: gcc
|
|
configure:12139: checking for g++
|
|
configure:12155: found /usr/bin/g++
|
|
configure:12166: result: g++
|
|
configure:12188: checking for gcc option to accept ISO C99
|
|
configure:12337: gcc -c -g -O2 conftest.c >&5
|
|
configure:12337: $? = 0
|
|
configure:12350: result: none needed
|
|
configure:12366: checking for C/C++ restrict keyword
|
|
configure:12391: gcc -c -g -O2 conftest.c >&5
|
|
configure:12391: $? = 0
|
|
configure:12399: result: __restrict
|
|
configure:12420: checking for gcc option to support OpenMP
|
|
configure:12435: gcc -o conftest -g -O2 conftest.c >&5
|
|
conftest.c:27:2: error: unknown type name 'choke'
|
|
choke me
|
|
^
|
|
In file included from conftest.c:29:0:
|
|
/usr/lib/gcc/x86_64-linux-gnu/5/include/omp.h:35:1: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'typedef'
|
|
typedef struct
|
|
^
|
|
configure:12435: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
|
|
|
| #ifndef _OPENMP
|
|
| choke me
|
|
| #endif
|
|
| #include <omp.h>
|
|
| int main () { return omp_get_num_threads (); }
|
|
|
|
|
configure:12452: gcc -o conftest -g -O2 -fopenmp conftest.c >&5
|
|
configure:12452: $? = 0
|
|
configure:12466: result: -fopenmp
|
|
configure:12520: checking for ar
|
|
configure:12547: result: ar
|
|
configure:12704: checking for ld
|
|
configure:12731: result: /usr/bin/ld -m elf_x86_64
|
|
configure:12796: checking for nm
|
|
configure:12823: result: /usr/bin/nm -B
|
|
configure:12888: checking for ar
|
|
configure:12915: result: ar
|
|
configure:12980: checking for as
|
|
configure:12996: found /usr/bin/as
|
|
configure:13007: result: as
|
|
configure:13072: checking for dlltool
|
|
configure:13099: result: false
|
|
configure:13164: checking for objdump
|
|
configure:13191: result: objdump
|
|
configure:13256: checking for strip
|
|
configure:13283: result: strip
|
|
configure:13348: checking for ranlib
|
|
configure:13375: result: ranlib
|
|
configure:13510: checking for C++ compiler version
|
|
configure:13519: g++ --version >&5
|
|
g++ (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010
|
|
Copyright (C) 2015 Free Software Foundation, Inc.
|
|
This is free software; see the source for copying conditions. There is NO
|
|
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
|
|
|
|
configure:13530: $? = 0
|
|
configure:13519: g++ -v >&5
|
|
Using built-in specs.
|
|
COLLECT_GCC=g++
|
|
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
|
|
Target: x86_64-linux-gnu
|
|
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.2.1-22ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
|
|
Thread model: posix
|
|
gcc version 5.2.1 20151010 (Ubuntu 5.2.1-22ubuntu2)
|
|
configure:13530: $? = 0
|
|
configure:13519: g++ -V >&5
|
|
g++: error: unrecognized command line option '-V'
|
|
g++: fatal error: no input files
|
|
compilation terminated.
|
|
configure:13530: $? = 1
|
|
configure:13519: g++ -qversion >&5
|
|
g++: error: unrecognized command line option '-qversion'
|
|
g++: fatal error: no input files
|
|
compilation terminated.
|
|
configure:13530: $? = 1
|
|
configure:13534: checking whether we are using the GNU C++ compiler
|
|
configure:13553: g++ -c conftest.cpp >&5
|
|
configure:13553: $? = 0
|
|
configure:13562: result: yes
|
|
configure:13571: checking whether g++ accepts -g
|
|
configure:13591: g++ -c -g conftest.cpp >&5
|
|
configure:13591: $? = 0
|
|
configure:13632: result: yes
|
|
configure:13657: checking dependency style of g++
|
|
configure:13768: result: gcc3
|
|
configure:13801: checking how to run the C++ preprocessor
|
|
configure:13828: g++ -E conftest.cpp
|
|
configure:13828: $? = 0
|
|
configure:13842: g++ -E conftest.cpp
|
|
conftest.cpp:25:28: fatal error: ac_nonexistent.h: No such file or directory
|
|
compilation terminated.
|
|
configure:13842: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:13867: result: g++ -E
|
|
configure:13887: g++ -E conftest.cpp
|
|
configure:13887: $? = 0
|
|
configure:13901: g++ -E conftest.cpp
|
|
conftest.cpp:25:28: fatal error: ac_nonexistent.h: No such file or directory
|
|
compilation terminated.
|
|
configure:13901: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:14070: checking for ld used by g++
|
|
configure:14137: result: /usr/bin/ld -m elf_x86_64
|
|
configure:14144: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld
|
|
configure:14159: result: yes
|
|
configure:14214: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:15219: result: yes
|
|
configure:15255: g++ -c -g -O2 conftest.cpp >&5
|
|
configure:15258: $? = 0
|
|
configure:15778: checking for g++ option to produce PIC
|
|
configure:15785: result: -fPIC -DPIC
|
|
configure:15793: checking if g++ PIC flag -fPIC -DPIC works
|
|
configure:15811: g++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5
|
|
configure:15815: $? = 0
|
|
configure:15828: result: yes
|
|
configure:15851: checking if g++ static flag -static works
|
|
configure:15879: result: yes
|
|
configure:15891: checking if g++ supports -c -o file.o
|
|
configure:15912: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
|
|
configure:15916: $? = 0
|
|
configure:15938: result: yes
|
|
configure:15943: checking if g++ supports -c -o file.o
|
|
configure:15990: result: yes
|
|
configure:16020: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:16056: result: yes
|
|
configure:16197: checking dynamic linker characteristics
|
|
configure:16864: result: GNU/Linux ld.so
|
|
configure:16917: checking how to hardcode library paths into programs
|
|
configure:16942: result: immediate
|
|
configure:16994: checking for special C compiler options needed for large files
|
|
configure:17039: result: no
|
|
configure:17045: checking for _FILE_OFFSET_BITS value needed for large files
|
|
configure:17070: gcc -c -g -O2 conftest.c >&5
|
|
configure:17070: $? = 0
|
|
configure:17102: result: no
|
|
configure:17193: checking for stdlib.h
|
|
configure:17193: result: yes
|
|
configure:17193: checking for unistd.h
|
|
configure:17193: result: yes
|
|
configure:17193: checking for sys/param.h
|
|
configure:17193: gcc -c -g -O2 conftest.c >&5
|
|
configure:17193: $? = 0
|
|
configure:17193: result: yes
|
|
configure:17213: checking for getpagesize
|
|
configure:17213: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17213: $? = 0
|
|
configure:17213: result: yes
|
|
configure:17222: checking for working mmap
|
|
configure:17369: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17369: $? = 0
|
|
configure:17369: ./conftest
|
|
configure:17369: $? = 0
|
|
configure:17379: result: yes
|
|
configure:17390: checking for malloc in -lmalloc
|
|
configure:17415: gcc -o conftest -g -O2 conftest.c -lmalloc >&5
|
|
conftest.c:37:6: warning: conflicting types for built-in function 'malloc'
|
|
char malloc ();
|
|
^
|
|
/usr/bin/ld: cannot find -lmalloc
|
|
collect2: error: ld returned 1 exit status
|
|
configure:17415: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char malloc ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return malloc ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17424: result: no
|
|
configure:17437: checking for struct stat.st_blksize
|
|
configure:17437: gcc -c -g -O2 conftest.c >&5
|
|
configure:17437: $? = 0
|
|
configure:17437: result: yes
|
|
configure:17451: checking sys/resource.h usability
|
|
configure:17451: gcc -c -g -O2 conftest.c >&5
|
|
configure:17451: $? = 0
|
|
configure:17451: result: yes
|
|
configure:17451: checking sys/resource.h presence
|
|
configure:17451: gcc -E conftest.c
|
|
configure:17451: $? = 0
|
|
configure:17451: result: yes
|
|
configure:17451: checking for sys/resource.h
|
|
configure:17451: result: yes
|
|
configure:17463: checking sys/times.h usability
|
|
configure:17463: gcc -c -g -O2 conftest.c >&5
|
|
configure:17463: $? = 0
|
|
configure:17463: result: yes
|
|
configure:17463: checking sys/times.h presence
|
|
configure:17463: gcc -E conftest.c
|
|
configure:17463: $? = 0
|
|
configure:17463: result: yes
|
|
configure:17463: checking for sys/times.h
|
|
configure:17463: result: yes
|
|
configure:17475: checking malloc.h usability
|
|
configure:17475: gcc -c -g -O2 conftest.c >&5
|
|
configure:17475: $? = 0
|
|
configure:17475: result: yes
|
|
configure:17475: checking malloc.h presence
|
|
configure:17475: gcc -E conftest.c
|
|
configure:17475: $? = 0
|
|
configure:17475: result: yes
|
|
configure:17475: checking for malloc.h
|
|
configure:17475: result: yes
|
|
configure:17487: checking glob.h usability
|
|
configure:17487: gcc -c -g -O2 conftest.c >&5
|
|
configure:17487: $? = 0
|
|
configure:17487: result: yes
|
|
configure:17487: checking glob.h presence
|
|
configure:17487: gcc -E conftest.c
|
|
configure:17487: $? = 0
|
|
configure:17487: result: yes
|
|
configure:17487: checking for glob.h
|
|
configure:17487: result: yes
|
|
configure:17499: checking fnmatch.h usability
|
|
configure:17499: gcc -c -g -O2 conftest.c >&5
|
|
configure:17499: $? = 0
|
|
configure:17499: result: yes
|
|
configure:17499: checking fnmatch.h presence
|
|
configure:17499: gcc -E conftest.c
|
|
configure:17499: $? = 0
|
|
configure:17499: result: yes
|
|
configure:17499: checking for fnmatch.h
|
|
configure:17499: result: yes
|
|
configure:17511: checking wordexp.h usability
|
|
configure:17511: gcc -c -g -O2 conftest.c >&5
|
|
configure:17511: $? = 0
|
|
configure:17511: result: yes
|
|
configure:17511: checking wordexp.h presence
|
|
configure:17511: gcc -E conftest.c
|
|
configure:17511: $? = 0
|
|
configure:17511: result: yes
|
|
configure:17511: checking for wordexp.h
|
|
configure:17511: result: yes
|
|
configure:17523: checking execinfo.h usability
|
|
configure:17523: gcc -c -g -O2 conftest.c >&5
|
|
configure:17523: $? = 0
|
|
configure:17523: result: yes
|
|
configure:17523: checking execinfo.h presence
|
|
configure:17523: gcc -E conftest.c
|
|
configure:17523: $? = 0
|
|
configure:17523: result: yes
|
|
configure:17523: checking for execinfo.h
|
|
configure:17523: result: yes
|
|
configure:17537: checking for mallinfo
|
|
configure:17537: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17537: $? = 0
|
|
configure:17537: result: yes
|
|
configure:17548: checking for backtrace
|
|
configure:17548: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17548: $? = 0
|
|
configure:17548: result: yes
|
|
configure:17561: checking for getrlimit
|
|
configure:17561: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17561: $? = 0
|
|
configure:17561: result: yes
|
|
configure:17572: checking for gethostname
|
|
configure:17572: gcc -o conftest -g -O2 conftest.c >&5
|
|
configure:17572: $? = 0
|
|
configure:17572: result: yes
|
|
configure:17640: checking for floor in -lm
|
|
configure:17665: gcc -o conftest -g -O2 conftest.c -lm >&5
|
|
conftest.c:53:6: warning: conflicting types for built-in function 'floor'
|
|
char floor ();
|
|
^
|
|
configure:17665: $? = 0
|
|
configure:17674: result: yes
|
|
configure:17687: checking whether isnan is declared
|
|
configure:17687: gcc -c -g -O2 conftest.c >&5
|
|
configure:17687: $? = 0
|
|
configure:17687: result: yes
|
|
configure:17702: checking for sqrtl
|
|
configure:17702: gcc -o conftest -g -O2 conftest.c -lm >&5
|
|
conftest.c:71:6: warning: conflicting types for built-in function 'sqrtl'
|
|
char sqrtl ();
|
|
^
|
|
configure:17702: $? = 0
|
|
configure:17702: result: yes
|
|
configure:17713: checking for feenableexcept
|
|
configure:17713: gcc -o conftest -g -O2 conftest.c -lm >&5
|
|
configure:17713: $? = 0
|
|
configure:17713: result: yes
|
|
configure:17723: checking for fenv_t.__control
|
|
configure:17723: gcc -c -g -O2 conftest.c >&5
|
|
conftest.c: In function 'main':
|
|
conftest.c:56:12: error: 'fenv_t {aka struct <anonymous>}' has no member named '__control'
|
|
if (ac_aggr.__control)
|
|
^
|
|
configure:17723: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| /* end confdefs.h. */
|
|
| #include <fenv.h>
|
|
|
|
|
| int
|
|
| main ()
|
|
| {
|
|
| static fenv_t ac_aggr;
|
|
| if (ac_aggr.__control)
|
|
| return 0;
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17723: gcc -c -g -O2 conftest.c >&5
|
|
conftest.c: In function 'main':
|
|
conftest.c:56:19: error: 'fenv_t {aka struct <anonymous>}' has no member named '__control'
|
|
if (sizeof ac_aggr.__control)
|
|
^
|
|
configure:17723: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| /* end confdefs.h. */
|
|
| #include <fenv.h>
|
|
|
|
|
| int
|
|
| main ()
|
|
| {
|
|
| static fenv_t ac_aggr;
|
|
| if (sizeof ac_aggr.__control)
|
|
| return 0;
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17723: result: no
|
|
configure:17733: checking for fenv_t.__mxcsr
|
|
configure:17733: gcc -c -g -O2 conftest.c >&5
|
|
configure:17733: $? = 0
|
|
configure:17733: result: yes
|
|
configure:17756: checking for DATA support
|
|
configure:17770: result:
|
|
configure:17914: checking if compiler needs -Werror to reject unknown flags
|
|
configure:17930: gcc -c -g -O2 -fopenmp -Werror -Wunknown-warning-option -Wsizeof-array-argument conftest.c >&5
|
|
gcc: error: unrecognized command line option '-Wunknown-warning-option'
|
|
configure:17930: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| /* end confdefs.h. */
|
|
| int foo(void);
|
|
| int
|
|
| main ()
|
|
| {
|
|
| foo()
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17935: result: no
|
|
configure:18001: checking for the pthreads library -lpthreads
|
|
configure:18039: gcc -o conftest -g -O2 -fopenmp conftest.c -lpthreads -lm >&5
|
|
/usr/bin/ld: cannot find -lpthreads
|
|
collect2: error: ld returned 1 exit status
|
|
configure:18039: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| /* end confdefs.h. */
|
|
| #include <pthread.h>
|
|
| static void routine(void *a) { a = 0; }
|
|
| static void *start_routine(void *a) { return a; }
|
|
| int
|
|
| main ()
|
|
| {
|
|
| pthread_t th; pthread_attr_t attr;
|
|
| pthread_create(&th, 0, start_routine, 0);
|
|
| pthread_join(th, 0);
|
|
| pthread_attr_init(&attr);
|
|
| pthread_cleanup_push(routine, 0);
|
|
| pthread_cleanup_pop(0) /* ; */
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18048: result: no
|
|
configure:17946: checking whether pthreads work without any flags
|
|
configure:18039: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
|
|
configure:18039: $? = 0
|
|
configure:18048: result: yes
|
|
configure:18067: checking for joinable pthread attribute
|
|
configure:18082: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
|
|
configure:18082: $? = 0
|
|
configure:18088: result: PTHREAD_CREATE_JOINABLE
|
|
configure:18098: checking if more special flags are required for pthreads
|
|
configure:18113: result: no
|
|
configure:18119: checking for PTHREAD_PRIO_INHERIT
|
|
configure:18136: gcc -o conftest -g -O2 -fopenmp conftest.c -lm >&5
|
|
configure:18136: $? = 0
|
|
configure:18145: result: yes
|
|
configure:18493: checking for szlib library
|
|
configure:18495: result: suppressed
|
|
configure:18661: checking hdf5.h usability
|
|
configure:18661: gcc -c -g -O2 -fopenmp -I/usr/local//include conftest.c >&5
|
|
configure:18661: $? = 0
|
|
configure:18661: result: yes
|
|
configure:18661: checking hdf5.h presence
|
|
configure:18661: gcc -E -I/usr/local//include conftest.c
|
|
configure:18661: $? = 0
|
|
configure:18661: result: yes
|
|
configure:18661: checking for hdf5.h
|
|
configure:18661: result: yes
|
|
configure:18671: checking for library containing H5Fopen
|
|
configure:18702: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -L/usr/local//lib conftest.c -lm >&5
|
|
/tmp/ccXxLkvo.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:66: undefined reference to `H5Fopen'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:18702: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5Fopen ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5Fopen ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18702: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -L/usr/local//lib conftest.c -lhdf5 -lm >&5
|
|
configure:18702: $? = 0
|
|
configure:18719: result: -lhdf5
|
|
configure:18731: checking for library containing H5DSis_scale
|
|
configure:18762: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -L/usr/local//lib conftest.c -lhdf5 -lm >&5
|
|
/tmp/ccRULCHv.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:67: undefined reference to `H5DSis_scale'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:18762: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5DSis_scale ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5DSis_scale ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18762: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -L/usr/local//lib conftest.c -lhdf5_hl -lhdf5 -lm >&5
|
|
configure:18762: $? = 0
|
|
configure:18779: result: -lhdf5_hl
|
|
configure:18994: checking netcdf.h usability
|
|
configure:18994: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:18994: $? = 0
|
|
configure:18994: result: yes
|
|
configure:18994: checking netcdf.h presence
|
|
configure:18994: gcc -E -I/usr/local//include -I/usr/local//include conftest.c
|
|
configure:18994: $? = 0
|
|
configure:18994: result: yes
|
|
configure:18994: checking for netcdf.h
|
|
configure:18994: result: yes
|
|
configure:19004: checking for library containing nc_open
|
|
configure:19035: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib conftest.c -lhdf5_hl -lhdf5 -lm >&5
|
|
/tmp/cctCPBmG.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:68: undefined reference to `nc_open'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:19035: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char nc_open ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return nc_open ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19035: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
configure:19035: $? = 0
|
|
configure:19052: result: -lnetcdf
|
|
configure:19067: checking nc-config script
|
|
configure:19071: checking for nc-config
|
|
configure:19087: found /usr/local//bin/nc-config
|
|
configure:19098: result: /usr/local//bin/nc-config
|
|
configure:19107: checking netcdf's OpenDAP support
|
|
configure:19116: result: no
|
|
configure:19119: checking netcdf's nc2 support
|
|
configure:19126: result: yes
|
|
configure:19132: checking netcdf's nc4 support
|
|
configure:19139: result: yes
|
|
configure:19145: checking netcdf's nc4/hdf5 support
|
|
configure:19152: result: yes
|
|
configure:19178: checking for library containing H5TS_mutex_lock
|
|
configure:19209: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
/tmp/ccAu8ASC.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:72: undefined reference to `H5TS_mutex_lock'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:19209: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_NETCDF2 1
|
|
| #define HAVE_NETCDF4 1
|
|
| #define HAVE_NC4HDF5 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5TS_mutex_lock ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5TS_mutex_lock ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19209: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
/tmp/ccImDsjJ.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:72: undefined reference to `H5TS_mutex_lock'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:19209: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_NETCDF2 1
|
|
| #define HAVE_NETCDF4 1
|
|
| #define HAVE_NC4HDF5 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5TS_mutex_lock ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5TS_mutex_lock ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19226: result: no
|
|
configure:19433: checking for the UDUNITS2 library
|
|
configure:19435: result: suppressed
|
|
configure:19599: checking for the CMOR library
|
|
configure:19601: result: suppressed
|
|
configure:19701: checking grib_api.h usability
|
|
configure:19701: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:19701: $? = 0
|
|
configure:19701: result: yes
|
|
configure:19701: checking grib_api.h presence
|
|
configure:19701: gcc -E -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c
|
|
configure:19701: $? = 0
|
|
configure:19701: result: yes
|
|
configure:19701: checking for grib_api.h
|
|
configure:19701: result: yes
|
|
configure:19711: checking for library containing grib_get_message
|
|
configure:19742: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
/tmp/cc6e1dZP.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:73: undefined reference to `grib_get_message'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:19742: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_NETCDF2 1
|
|
| #define HAVE_NETCDF4 1
|
|
| #define HAVE_NC4HDF5 1
|
|
| #define HAVE_GRIB_API_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char grib_get_message ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return grib_get_message ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19742: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib conftest.c -lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
configure:19742: $? = 0
|
|
configure:19759: result: -lgrib_api
|
|
configure:19792: checking for GRIB support
|
|
configure:19809: result: yes
|
|
configure:19815: checking for CGRIBEX support
|
|
configure:19832: result: yes
|
|
configure:19838: checking for SERVICE support
|
|
configure:19855: result: yes
|
|
configure:19861: checking for EXTRA support
|
|
configure:19878: result: yes
|
|
configure:19884: checking for IEG support
|
|
configure:19901: result: yes
|
|
configure:19907: checking for FFTW3 support
|
|
configure:20089: checking proj_api.h usability
|
|
configure:20089: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:20089: $? = 0
|
|
configure:20089: result: yes
|
|
configure:20089: checking proj_api.h presence
|
|
configure:20089: gcc -E -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c
|
|
configure:20089: $? = 0
|
|
configure:20089: result: yes
|
|
configure:20089: checking for proj_api.h
|
|
configure:20089: result: yes
|
|
configure:20099: checking for library containing pj_init
|
|
configure:20130: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib conftest.c -lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
/tmp/ccTPFxb3.o: In function `main':
|
|
/home/gui/Downloads/cdo-1.7.2/conftest.c:80: undefined reference to `pj_init'
|
|
collect2: error: ld returned 1 exit status
|
|
configure:20130: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.2"
|
|
| #define PACKAGE_STRING "cdo 1.7.2"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.2"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.2"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_EXECINFO_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_BACKTRACE 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (Ubuntu 5.2.1-22ubuntu2) 5.2.1 20151010"
|
|
| #define USER_NAME "root"
|
|
| #define HOST_NAME "zeus"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define HAVE_FEENABLEEXCEPT 1
|
|
| #define HAVE_FENV_T___MXCSR 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_PTHREAD_PRIO_INHERIT 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_NETCDF2 1
|
|
| #define HAVE_NETCDF4 1
|
|
| #define HAVE_NC4HDF5 1
|
|
| #define HAVE_GRIB_API_H 1
|
|
| #define HAVE_LIBGRIB_API 1
|
|
| #define HAVE_LIBGRIB 1
|
|
| #define HAVE_LIBCGRIBEX 1
|
|
| #define HAVE_LIBSERVICE 1
|
|
| #define HAVE_LIBEXTRA 1
|
|
| #define HAVE_LIBIEG 1
|
|
| #define HAVE_PROJ_API_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char pj_init ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return pj_init ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:20130: gcc -o conftest -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib conftest.c -lproj -lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lm >&5
|
|
configure:20130: $? = 0
|
|
configure:20147: result: -lproj
|
|
configure:20352: checking for the CURL library
|
|
configure:20354: result: suppressed
|
|
configure:20534: checking for MAGICS library
|
|
configure:20536: result: suppressed
|
|
configure:20739: checking for XML2 library
|
|
configure:20741: result: suppressed
|
|
configure:20760: checking for build a separate CDI library and link CDO to it
|
|
configure:20777: result: no
|
|
configure:20801: checking for building an additional static CDO binary
|
|
configure:20814: result: no
|
|
configure:20833: checking if x86/amd64 assembler speaks SSE4.2
|
|
configure:20856: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:20856: $? = 0
|
|
configure:20859: result: yes
|
|
configure:20884: checking if x86/amd64 assembler speaks AVX
|
|
configure:20905: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:20905: $? = 0
|
|
configure:20908: result: yes
|
|
configure:20933: checking if x86/amd64 assembler speaks AVX2
|
|
configure:20954: gcc -c -g -O2 -fopenmp -I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include conftest.c >&5
|
|
configure:20954: $? = 0
|
|
configure:20957: result: yes
|
|
configure:20991: result: no
|
|
configure:21018: checking for gawk
|
|
configure:21045: result: mawk
|
|
configure:21182: checking that generated files are newer than configure
|
|
configure:21188: result: done
|
|
configure:21243: creating ./config.status
|
|
|
|
## ---------------------- ##
|
|
## Running config.status. ##
|
|
## ---------------------- ##
|
|
|
|
This file was extended by cdo config.status 1.7.2, which was
|
|
generated by GNU Autoconf 2.68. Invocation command line was
|
|
|
|
CONFIG_FILES =
|
|
CONFIG_HEADERS =
|
|
CONFIG_LINKS =
|
|
CONFIG_COMMANDS =
|
|
$ ./config.status
|
|
|
|
on zeus
|
|
|
|
config.status:1305: creating test/File.test
|
|
config.status:1305: creating test/Read_grib.test
|
|
config.status:1305: creating test/Read_netcdf.test
|
|
config.status:1305: creating test/Copy_netcdf.test
|
|
config.status:1305: creating test/Cat.test
|
|
config.status:1305: creating test/Gridarea.test
|
|
config.status:1305: creating test/Genweights.test
|
|
config.status:1305: creating test/Remap.test
|
|
config.status:1305: creating test/Select.test
|
|
config.status:1305: creating test/Spectral.test
|
|
config.status:1305: creating test/Timstat.test
|
|
config.status:1305: creating test/Vertint.test
|
|
config.status:1305: creating test/Ymonstat.test
|
|
config.status:1305: creating test/Fldstat.test
|
|
config.status:1305: creating test/Fldpctl.test
|
|
config.status:1305: creating test/Ensstat.test
|
|
config.status:1305: creating test/Enspctl.test
|
|
config.status:1305: creating test/Afterburner.test
|
|
config.status:1305: creating test/Detrend.test
|
|
config.status:1305: creating test/Arithc.test
|
|
config.status:1305: creating test/Arith.test
|
|
config.status:1305: creating test/Expr.test
|
|
config.status:1305: creating test/Gradsdes.test
|
|
config.status:1305: creating test/Collgrid.test
|
|
config.status:1305: creating test/threads.test
|
|
config.status:1305: creating test/tsformat.test
|
|
config.status:1305: creating test/wildcard.test
|
|
config.status:1305: creating test/MapReduce.test
|
|
config.status:1305: creating test/Ninfo.test
|
|
config.status:1305: creating Makefile
|
|
config.status:1305: creating src/Makefile
|
|
config.status:1305: creating contrib/Makefile
|
|
config.status:1305: creating test/Makefile
|
|
config.status:1305: creating test/data/Makefile
|
|
config.status:1305: creating cdo.spec
|
|
config.status:1305: creating cdo.settings
|
|
config.status:1305: creating src/config.h
|
|
config.status:1486: src/config.h is unchanged
|
|
config.status:1534: executing depfiles commands
|
|
config.status:1534: executing libtool commands
|
|
configure:23874: === configuring in libcdi (/home/gui/Downloads/cdo-1.7.2/libcdi)
|
|
configure:23937: running /bin/bash ./configure --disable-option-checking '--prefix=/usr/local' '--with-netcdf=/usr/local/' '--with-jasper=/usr/local/' '--with-hdf5=/usr/local/' '--with-grib_api=/usr/local/' '--with-proj=/usr/local/' '--with-jpeg=/usr/local/' --cache-file=/dev/null --srcdir=.
|
|
configure:23942: error: ./configure failed for libcdi
|
|
|
|
## ---------------- ##
|
|
## Cache variables. ##
|
|
## ---------------- ##
|
|
|
|
ac_cv_build=x86_64-unknown-linux-gnu
|
|
ac_cv_c_compiler_gnu=yes
|
|
ac_cv_c_restrict=__restrict
|
|
ac_cv_cxx_compiler_gnu=yes
|
|
ac_cv_env_CCC_set=
|
|
ac_cv_env_CCC_value=
|
|
ac_cv_env_CC_set=
|
|
ac_cv_env_CC_value=
|
|
ac_cv_env_CFLAGS_set=
|
|
ac_cv_env_CFLAGS_value=
|
|
ac_cv_env_CPPFLAGS_set=
|
|
ac_cv_env_CPPFLAGS_value=
|
|
ac_cv_env_CPP_set=
|
|
ac_cv_env_CPP_value=
|
|
ac_cv_env_CXXCPP_set=
|
|
ac_cv_env_CXXCPP_value=
|
|
ac_cv_env_CXXFLAGS_set=
|
|
ac_cv_env_CXXFLAGS_value=
|
|
ac_cv_env_CXX_set=
|
|
ac_cv_env_CXX_value=
|
|
ac_cv_env_LDFLAGS_set=
|
|
ac_cv_env_LDFLAGS_value=
|
|
ac_cv_env_LIBS_set=
|
|
ac_cv_env_LIBS_value=
|
|
ac_cv_env_build_alias_set=
|
|
ac_cv_env_build_alias_value=
|
|
ac_cv_env_host_alias_set=
|
|
ac_cv_env_host_alias_value=
|
|
ac_cv_env_target_alias_set=
|
|
ac_cv_env_target_alias_value=
|
|
ac_cv_func_backtrace=yes
|
|
ac_cv_func_feenableexcept=yes
|
|
ac_cv_func_gethostname=yes
|
|
ac_cv_func_getpagesize=yes
|
|
ac_cv_func_getrlimit=yes
|
|
ac_cv_func_mallinfo=yes
|
|
ac_cv_func_mmap_fixed_mapped=yes
|
|
ac_cv_func_sqrtl=yes
|
|
ac_cv_have_decl_isnan=yes
|
|
ac_cv_header_dlfcn_h=yes
|
|
ac_cv_header_execinfo_h=yes
|
|
ac_cv_header_fnmatch_h=yes
|
|
ac_cv_header_glob_h=yes
|
|
ac_cv_header_grib_api_h=yes
|
|
ac_cv_header_hdf5_h=yes
|
|
ac_cv_header_inttypes_h=yes
|
|
ac_cv_header_malloc_h=yes
|
|
ac_cv_header_memory_h=yes
|
|
ac_cv_header_netcdf_h=yes
|
|
ac_cv_header_proj_api_h=yes
|
|
ac_cv_header_stdc=yes
|
|
ac_cv_header_stdint_h=yes
|
|
ac_cv_header_stdlib_h=yes
|
|
ac_cv_header_string_h=yes
|
|
ac_cv_header_strings_h=yes
|
|
ac_cv_header_sys_param_h=yes
|
|
ac_cv_header_sys_resource_h=yes
|
|
ac_cv_header_sys_stat_h=yes
|
|
ac_cv_header_sys_times_h=yes
|
|
ac_cv_header_sys_types_h=yes
|
|
ac_cv_header_unistd_h=yes
|
|
ac_cv_header_wordexp_h=yes
|
|
ac_cv_host=x86_64-unknown-linux-gnu
|
|
ac_cv_lib_m_floor=yes
|
|
ac_cv_lib_malloc_malloc=no
|
|
ac_cv_member_fenv_t___control=no
|
|
ac_cv_member_fenv_t___mxcsr=yes
|
|
ac_cv_member_struct_stat_st_blksize=yes
|
|
ac_cv_objext=o
|
|
ac_cv_path_EGREP='/bin/grep -E'
|
|
ac_cv_path_FGREP='/bin/grep -F'
|
|
ac_cv_path_GREP=/bin/grep
|
|
ac_cv_path_SED=/bin/sed
|
|
ac_cv_path_install='/usr/bin/install -c'
|
|
ac_cv_path_mkdir=/bin/mkdir
|
|
ac_cv_prog_AWK=mawk
|
|
ac_cv_prog_CPP='gcc -E'
|
|
ac_cv_prog_CXXCPP='g++ -E'
|
|
ac_cv_prog_NC_CONFIG=/usr/local//bin/nc-config
|
|
ac_cv_prog_ac_ct_AR=ar
|
|
ac_cv_prog_ac_ct_AS=as
|
|
ac_cv_prog_ac_ct_CC=gcc
|
|
ac_cv_prog_ac_ct_CXX=g++
|
|
ac_cv_prog_ac_ct_DLLTOOL=false
|
|
ac_cv_prog_ac_ct_LD='/usr/bin/ld -m elf_x86_64'
|
|
ac_cv_prog_ac_ct_MANIFEST_TOOL=mt
|
|
ac_cv_prog_ac_ct_NM='/usr/bin/nm -B'
|
|
ac_cv_prog_ac_ct_OBJDUMP=objdump
|
|
ac_cv_prog_ac_ct_RANLIB=ranlib
|
|
ac_cv_prog_ac_ct_STRIP=strip
|
|
ac_cv_prog_c_openmp=-fopenmp
|
|
ac_cv_prog_cc_c89=
|
|
ac_cv_prog_cc_c99=
|
|
ac_cv_prog_cc_g=yes
|
|
ac_cv_prog_cxx_g=yes
|
|
ac_cv_prog_make_make_set=yes
|
|
ac_cv_search_H5DSis_scale=-lhdf5_hl
|
|
ac_cv_search_H5Fopen=-lhdf5
|
|
ac_cv_search_H5TS_mutex_lock=no
|
|
ac_cv_search_grib_get_message=-lgrib_api
|
|
ac_cv_search_nc_open=-lnetcdf
|
|
ac_cv_search_pj_init=-lproj
|
|
ac_cv_sys_file_offset_bits=no
|
|
ac_cv_sys_largefile_CC=no
|
|
am_cv_CC_dependencies_compiler_type=gcc3
|
|
am_cv_CXX_dependencies_compiler_type=gcc3
|
|
am_cv_ar_interface=ar
|
|
am_cv_make_support_nested_variables=yes
|
|
am_cv_prog_cc_c_o=yes
|
|
ax_cv_PTHREAD_PRIO_INHERIT=yes
|
|
lt_cv_ar_at_file=@
|
|
lt_cv_archive_cmds_need_lc=no
|
|
lt_cv_deplibs_check_method=pass_all
|
|
lt_cv_file_magic_cmd='$MAGIC_CMD'
|
|
lt_cv_file_magic_test_file=
|
|
lt_cv_ld_reload_flag=-r
|
|
lt_cv_nm_interface='BSD nm'
|
|
lt_cv_objdir=.libs
|
|
lt_cv_path_LD=/usr/bin/ld
|
|
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
|
|
lt_cv_path_NM='/usr/bin/nm -B'
|
|
lt_cv_path_mainfest_tool=no
|
|
lt_cv_prog_compiler_c_o=yes
|
|
lt_cv_prog_compiler_c_o_CXX=yes
|
|
lt_cv_prog_compiler_pic='-fPIC -DPIC'
|
|
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
|
|
lt_cv_prog_compiler_pic_works=yes
|
|
lt_cv_prog_compiler_pic_works_CXX=yes
|
|
lt_cv_prog_compiler_rtti_exceptions=no
|
|
lt_cv_prog_compiler_static_works=yes
|
|
lt_cv_prog_compiler_static_works_CXX=yes
|
|
lt_cv_prog_gnu_ld=yes
|
|
lt_cv_prog_gnu_ldcxx=yes
|
|
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
|
|
lt_cv_shlibpath_overrides_runpath=no
|
|
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
|
|
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
|
|
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
|
|
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
|
|
lt_cv_sys_max_cmd_len=1572864
|
|
lt_cv_to_host_file_cmd=func_convert_file_noop
|
|
lt_cv_to_tool_file_cmd=func_convert_file_noop
|
|
|
|
## ----------------- ##
|
|
## Output variables. ##
|
|
## ----------------- ##
|
|
|
|
ACLOCAL='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/missing aclocal-1.14'
|
|
AMDEPBACKSLASH='\'
|
|
AMDEP_FALSE='#'
|
|
AMDEP_TRUE=''
|
|
AMTAR='$${TAR-tar}'
|
|
AM_BACKSLASH='\'
|
|
AM_CPPFLAGS=''
|
|
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
|
|
AM_DEFAULT_VERBOSITY='1'
|
|
AM_V='$(V)'
|
|
AR='ar'
|
|
AS='as'
|
|
AUTOCONF='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/missing autoconf'
|
|
AUTOHEADER='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/missing autoheader'
|
|
AUTOMAKE='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/missing automake-1.14'
|
|
AWK='mawk'
|
|
BUILD_AVX2_TESTS_FALSE='#'
|
|
BUILD_AVX2_TESTS_TRUE=''
|
|
BUILD_AVX_TESTS_FALSE='#'
|
|
BUILD_AVX_TESTS_TRUE=''
|
|
BUILD_SSE42_TESTS_FALSE='#'
|
|
BUILD_SSE42_TESTS_TRUE=''
|
|
CC='gcc'
|
|
CCDEPMODE='depmode=gcc3'
|
|
CFLAGS='-g -O2 -fopenmp '
|
|
CLDFLAGS=''
|
|
CLIBS=''
|
|
CMOR_LIBS=''
|
|
CPP='gcc -E'
|
|
CPPFLAGS='-I/usr/local//include -I/usr/local//include -I/usr/local//include -I/usr/local//include '
|
|
CURL_INCLUDE=''
|
|
CURL_LDFLAGS=''
|
|
CXX='g++'
|
|
CXXCPP='g++ -E'
|
|
CXXDEPMODE='depmode=gcc3'
|
|
CXXFLAGS='-g -O2'
|
|
CYGPATH_W='echo'
|
|
DEFS='-DHAVE_CONFIG_H'
|
|
DEPDIR='.deps'
|
|
DLLTOOL='false'
|
|
DSYMUTIL=''
|
|
DUMPBIN=''
|
|
ECHO_C=''
|
|
ECHO_N='-n'
|
|
ECHO_T=''
|
|
EGREP='/bin/grep -E'
|
|
ENABLE_ALL_STATIC_FALSE=''
|
|
ENABLE_ALL_STATIC_TRUE='#'
|
|
ENABLE_CDI_LIB='false'
|
|
ENABLE_CDI_LIB_FALSE=''
|
|
ENABLE_CDI_LIB_TRUE='#'
|
|
ENABLE_CGRIBEX='yes'
|
|
ENABLE_CXX='no'
|
|
ENABLE_DATA=''
|
|
ENABLE_EXTRA='yes'
|
|
ENABLE_GRIB='yes'
|
|
ENABLE_GRIBAPI='yes'
|
|
ENABLE_IEG='yes'
|
|
ENABLE_MAGICS_FALSE=''
|
|
ENABLE_MAGICS_TRUE='#'
|
|
ENABLE_NC2='yes'
|
|
ENABLE_NC4='yes'
|
|
ENABLE_NC4HDF5='yes'
|
|
ENABLE_NETCDF='yes'
|
|
ENABLE_SERVICE='yes'
|
|
ENABLE_THREADS='yes'
|
|
EXEEXT=''
|
|
FCFLAGS=''
|
|
FGREP='/bin/grep -F'
|
|
GREP='/bin/grep'
|
|
GRIB_API_INCLUDE=' -I/usr/local//include'
|
|
GRIB_API_LIBS=' -L/usr/local//lib -lgrib_api'
|
|
HDF5_INCLUDE=' -I/usr/local//include'
|
|
HDF5_LIBS=' -L/usr/local//lib -lhdf5'
|
|
HDF5_ROOT='/usr/local/'
|
|
HOST_NAME='zeus'
|
|
INSTALL_DATA='${INSTALL} -m 644'
|
|
INSTALL_PROGRAM='${INSTALL}'
|
|
INSTALL_SCRIPT='${INSTALL}'
|
|
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
|
|
LD='/usr/bin/ld -m elf_x86_64'
|
|
LDFLAGS='-L/usr/local//lib -L/usr/local//lib -L/usr/local//lib -L/usr/local//lib '
|
|
LIBOBJS=''
|
|
LIBS='-lproj -lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lm '
|
|
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
|
|
LIPO=''
|
|
LN_S='ln -s'
|
|
LTLIBOBJS=''
|
|
MAGICS_INCLUDE=''
|
|
MAGICS_LIBS=''
|
|
MAGICS_ROOT=''
|
|
MAINT='#'
|
|
MAINTAINER_MODE_FALSE=''
|
|
MAINTAINER_MODE_TRUE='#'
|
|
MAKEINFO='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/missing makeinfo'
|
|
MANIFEST_TOOL=':'
|
|
MKDIR_P='/bin/mkdir -p'
|
|
NC_CONFIG='/usr/local//bin/nc-config'
|
|
NETCDF_INCLUDE=' -I/usr/local//include'
|
|
NETCDF_LIBS=' -L/usr/local//lib -lnetcdf'
|
|
NETCDF_ROOT='/usr/local/'
|
|
NM='/usr/bin/nm -B'
|
|
NMEDIT=''
|
|
OBJDUMP='objdump'
|
|
OBJEXT='o'
|
|
OPENMP_CFLAGS='-fopenmp'
|
|
OTOOL64=''
|
|
OTOOL=''
|
|
PACKAGE='cdo'
|
|
PACKAGE_BUGREPORT='http://mpimet.mpg.de/cdo'
|
|
PACKAGE_NAME='cdo'
|
|
PACKAGE_STRING='cdo 1.7.2'
|
|
PACKAGE_TARNAME='cdo'
|
|
PACKAGE_URL=''
|
|
PACKAGE_VERSION='1.7.2'
|
|
PATH_SEPARATOR=':'
|
|
PROJ_INCLUDE=' -I/usr/local//include'
|
|
PROJ_LDFLAGS=' -L/usr/local//lib -lproj'
|
|
PTHREAD_CC='gcc'
|
|
PTHREAD_CFLAGS=''
|
|
PTHREAD_LIBS=''
|
|
RANLIB='ranlib'
|
|
SED='/bin/sed'
|
|
SET_MAKE=''
|
|
SHELL='/bin/bash'
|
|
STRIP='strip'
|
|
SYSTEM_TYPE='x86_64-unknown-linux-gnu'
|
|
SZLIB_INCLUDE=''
|
|
SZLIB_LIBS=''
|
|
THREADS_INCLUDE=''
|
|
THREADS_LIBS=''
|
|
UDUNITS_INCLUDE=''
|
|
UDUNITS_LDFLAGS=''
|
|
USER_NAME='root'
|
|
VERSION='1.7.2'
|
|
XML2_LIBS=''
|
|
ac_ct_AR='ar'
|
|
ac_ct_CC='gcc'
|
|
ac_ct_CXX='g++'
|
|
ac_ct_DUMPBIN=''
|
|
am__EXEEXT_FALSE=''
|
|
am__EXEEXT_TRUE='#'
|
|
am__fastdepCC_FALSE='#'
|
|
am__fastdepCC_TRUE=''
|
|
am__fastdepCXX_FALSE='#'
|
|
am__fastdepCXX_TRUE=''
|
|
am__include='include'
|
|
am__isrc=''
|
|
am__leading_dot='.'
|
|
am__nodep='_no'
|
|
am__quote=''
|
|
am__tar='$${TAR-tar} chof - "$$tardir"'
|
|
am__untar='$${TAR-tar} xf -'
|
|
ax_pthread_config=''
|
|
bindir='${exec_prefix}/bin'
|
|
build='x86_64-unknown-linux-gnu'
|
|
build_alias=''
|
|
build_cpu='x86_64'
|
|
build_os='linux-gnu'
|
|
build_vendor='unknown'
|
|
datadir='${datarootdir}'
|
|
datarootdir='${prefix}/share'
|
|
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
|
|
dvidir='${docdir}'
|
|
exec_prefix='${prefix}'
|
|
host='x86_64-unknown-linux-gnu'
|
|
host_alias=''
|
|
host_cpu='x86_64'
|
|
host_os='linux-gnu'
|
|
host_vendor='unknown'
|
|
htmldir='${docdir}'
|
|
includedir='${prefix}/include'
|
|
infodir='${datarootdir}/info'
|
|
install_sh='${SHELL} /home/gui/Downloads/cdo-1.7.2/config/install-sh'
|
|
libdir='${exec_prefix}/lib'
|
|
libexecdir='${exec_prefix}/libexec'
|
|
localedir='${datarootdir}/locale'
|
|
localstatedir='${prefix}/var'
|
|
mandir='${datarootdir}/man'
|
|
mkdir_p='$(MKDIR_P)'
|
|
oldincludedir='/usr/include'
|
|
pdfdir='${docdir}'
|
|
prefix='/usr/local'
|
|
program_transform_name='s,x,x,'
|
|
psdir='${docdir}'
|
|
sbindir='${exec_prefix}/sbin'
|
|
sharedstatedir='${prefix}/com'
|
|
subdirs=' libcdi'
|
|
sysconfdir='${prefix}/etc'
|
|
target_alias=''
|
|
|
|
configure: exit 1
|