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This file contains any messages produced by compilers while
|
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running configure, to aid debugging if configure makes a mistake.
|
|
|
|
It was created by cdo configure 1.7.0, which was
|
|
generated by GNU Autoconf 2.68. Invocation command line was
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$ ./configure --with-netcdf=/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib --with-hdf5=/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib --with-grib_api=/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/
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## --------- ##
|
|
## Platform. ##
|
|
## --------- ##
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|
hostname = service
|
|
uname -m = x86_64
|
|
uname -r = 2.6.32-504.el6.x86_64
|
|
uname -s = Linux
|
|
uname -v = #1 SMP Wed Oct 15 04:27:16 UTC 2014
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|
/usr/bin/uname -p = unknown
|
|
/bin/uname -X = unknown
|
|
|
|
/bin/arch = x86_64
|
|
/usr/bin/arch -k = unknown
|
|
/usr/convex/getsysinfo = unknown
|
|
/usr/bin/hostinfo = unknown
|
|
/bin/machine = unknown
|
|
/usr/bin/oslevel = unknown
|
|
/bin/universe = unknown
|
|
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin
|
|
PATH: /usr/local/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin
|
|
PATH: /RHMC/soft/netcdf/bin
|
|
PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64
|
|
PATH: /opt/intel/impi/4.0.3/intel64/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin
|
|
PATH: /usr/local/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin
|
|
PATH: /RHMC/soft/netcdf/bin
|
|
PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64
|
|
PATH: /opt/intel/impi/4.0.3/intel64/bin
|
|
PATH: /usr/lib64/qt-3.3/bin
|
|
PATH: /usr/local/bin
|
|
PATH: /bin
|
|
PATH: /usr/bin
|
|
PATH: /usr/local/sbin
|
|
PATH: /usr/sbin
|
|
PATH: /sbin
|
|
PATH: /opt/ibutils/bin
|
|
PATH: /usr/sbin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin
|
|
PATH: /RHMC/users/models/wrf/bin
|
|
PATH: /usr/sbin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin
|
|
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin
|
|
|
|
|
|
## ----------- ##
|
|
## Core tests. ##
|
|
## ----------- ##
|
|
|
|
configure:2605: checking build system type
|
|
configure:2619: result: x86_64-unknown-linux-gnu
|
|
configure:2639: checking host system type
|
|
configure:2652: result: x86_64-unknown-linux-gnu
|
|
configure:2691: checking for a BSD-compatible install
|
|
configure:2759: result: /usr/bin/install -c
|
|
configure:2770: checking whether build environment is sane
|
|
configure:2825: result: yes
|
|
configure:2976: checking for a thread-safe mkdir -p
|
|
configure:3015: result: /bin/mkdir -p
|
|
configure:3022: checking for gawk
|
|
configure:3038: found /bin/gawk
|
|
configure:3049: result: gawk
|
|
configure:3060: checking whether make sets $(MAKE)
|
|
configure:3082: result: yes
|
|
configure:3111: checking whether make supports nested variables
|
|
configure:3128: result: yes
|
|
configure:3256: checking whether to enable maintainer-specific portions of Makefiles
|
|
configure:3265: result: no
|
|
configure:3292: checking for style of include used by make
|
|
configure:3320: result: GNU
|
|
configure:3391: checking for gcc
|
|
configure:3407: found /usr/bin/gcc
|
|
configure:3418: result: gcc
|
|
configure:3647: checking for C compiler version
|
|
configure:3656: gcc --version >&5
|
|
gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)
|
|
Copyright (C) 2010 Free Software Foundation, Inc.
|
|
This is free software; see the source for copying conditions. There is NO
|
|
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
|
|
|
|
configure:3667: $? = 0
|
|
configure:3656: gcc -v >&5
|
|
Using built-in specs.
|
|
Target: x86_64-redhat-linux
|
|
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
|
|
Thread model: posix
|
|
gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC)
|
|
configure:3667: $? = 0
|
|
configure:3656: gcc -V >&5
|
|
gcc: '-V' option must have argument
|
|
configure:3667: $? = 1
|
|
configure:3656: gcc -qversion >&5
|
|
gcc: unrecognized option '-qversion'
|
|
gcc: no input files
|
|
configure:3667: $? = 1
|
|
configure:3687: checking whether the C compiler works
|
|
configure:3709: gcc -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:3713: $? = 0
|
|
configure:3761: result: yes
|
|
configure:3764: checking for C compiler default output file name
|
|
configure:3766: result: a.out
|
|
configure:3772: checking for suffix of executables
|
|
configure:3779: gcc -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:3783: $? = 0
|
|
configure:3805: result:
|
|
configure:3827: checking whether we are cross compiling
|
|
configure:3835: gcc -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:3839: $? = 0
|
|
configure:3846: ./conftest
|
|
configure:3850: $? = 0
|
|
configure:3865: result: no
|
|
configure:3870: checking for suffix of object files
|
|
configure:3892: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:3896: $? = 0
|
|
configure:3917: result: o
|
|
configure:3921: checking whether we are using the GNU C compiler
|
|
configure:3940: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:3940: $? = 0
|
|
configure:3949: result: yes
|
|
configure:3958: checking whether gcc accepts -g
|
|
configure:3978: gcc -c -g -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:3978: $? = 0
|
|
configure:4019: result: yes
|
|
configure:4036: checking for gcc option to accept ISO C89
|
|
configure:4100: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:4100: $? = 0
|
|
configure:4113: result: none needed
|
|
configure:4138: checking whether gcc understands -c and -o together
|
|
configure:4160: gcc -c conftest.c -o conftest2.o
|
|
configure:4163: $? = 0
|
|
configure:4160: gcc -c conftest.c -o conftest2.o
|
|
configure:4163: $? = 0
|
|
configure:4175: result: yes
|
|
configure:4194: checking dependency style of gcc
|
|
configure:4305: result: gcc3
|
|
configure:4370: checking for ar
|
|
configure:4386: found /usr/bin/ar
|
|
configure:4397: result: ar
|
|
configure:4423: checking the archiver (ar) interface
|
|
configure:4439: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:4439: $? = 0
|
|
configure:4441: ar cru libconftest.a conftest.o >&5
|
|
configure:4444: $? = 0
|
|
configure:4472: result: ar
|
|
configure:4493: setting up libtool
|
|
configure:4541: checking how to print strings
|
|
configure:4568: result: printf
|
|
configure:4589: checking for a sed that does not truncate output
|
|
configure:4653: result: /bin/sed
|
|
configure:4671: checking for grep that handles long lines and -e
|
|
configure:4729: result: /bin/grep
|
|
configure:4734: checking for egrep
|
|
configure:4796: result: /bin/grep -E
|
|
configure:4801: checking for fgrep
|
|
configure:4863: result: /bin/grep -F
|
|
configure:4898: checking for ld used by gcc
|
|
configure:4965: result: /usr/bin/ld
|
|
configure:4972: checking if the linker (/usr/bin/ld) is GNU ld
|
|
configure:4987: result: yes
|
|
configure:4999: checking for BSD- or MS-compatible name lister (nm)
|
|
configure:5048: result: /usr/bin/nm -B
|
|
configure:5178: checking the name lister (/usr/bin/nm -B) interface
|
|
configure:5185: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:5188: /usr/bin/nm -B "conftest.o"
|
|
configure:5191: output
|
|
0000000000000000 B some_variable
|
|
configure:5198: result: BSD nm
|
|
configure:5201: checking whether ln -s works
|
|
configure:5205: result: yes
|
|
configure:5213: checking the maximum length of command line arguments
|
|
configure:5343: result: 1966080
|
|
configure:5360: checking whether the shell understands some XSI constructs
|
|
configure:5370: result: yes
|
|
configure:5374: checking whether the shell understands "+="
|
|
configure:5380: result: yes
|
|
configure:5415: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format
|
|
configure:5455: result: func_convert_file_noop
|
|
configure:5462: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format
|
|
configure:5482: result: func_convert_file_noop
|
|
configure:5489: checking for /usr/bin/ld option to reload object files
|
|
configure:5496: result: -r
|
|
configure:5570: checking for objdump
|
|
configure:5586: found /usr/bin/objdump
|
|
configure:5597: result: objdump
|
|
configure:5629: checking how to recognize dependent libraries
|
|
configure:5831: result: pass_all
|
|
configure:5916: checking for dlltool
|
|
configure:5946: result: no
|
|
configure:5976: checking how to associate runtime and link libraries
|
|
configure:6003: result: printf %s\n
|
|
configure:6127: checking for archiver @FILE support
|
|
configure:6144: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:6144: $? = 0
|
|
configure:6147: ar cru libconftest.a @conftest.lst >&5
|
|
configure:6150: $? = 0
|
|
configure:6155: ar cru libconftest.a @conftest.lst >&5
|
|
ar: conftest.o: No such file or directory
|
|
configure:6158: $? = 1
|
|
configure:6170: result: @
|
|
configure:6228: checking for strip
|
|
configure:6244: found /usr/bin/strip
|
|
configure:6255: result: strip
|
|
configure:6327: checking for ranlib
|
|
configure:6343: found /usr/bin/ranlib
|
|
configure:6354: result: ranlib
|
|
configure:6456: checking command to parse /usr/bin/nm -B output from gcc object
|
|
configure:6576: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:6579: $? = 0
|
|
configure:6583: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
|
|
configure:6586: $? = 0
|
|
configure:6652: gcc -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c conftstm.o >&5
|
|
configure:6655: $? = 0
|
|
configure:6693: result: ok
|
|
configure:6730: checking for sysroot
|
|
configure:6760: result: no
|
|
configure:6837: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:6840: $? = 0
|
|
configure:7016: checking for mt
|
|
configure:7046: result: no
|
|
configure:7066: checking if : is a manifest tool
|
|
configure:7072: : '-?'
|
|
configure:7080: result: no
|
|
configure:7722: checking how to run the C preprocessor
|
|
configure:7753: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:7753: $? = 0
|
|
configure:7767: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
|
|
configure:7767: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:7792: result: gcc -E
|
|
configure:7812: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:7812: $? = 0
|
|
configure:7826: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
|
|
configure:7826: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:7855: checking for ANSI C header files
|
|
configure:7875: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7875: $? = 0
|
|
configure:7948: gcc -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:7948: $? = 0
|
|
configure:7948: ./conftest
|
|
configure:7948: $? = 0
|
|
configure:7959: result: yes
|
|
configure:7972: checking for sys/types.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for sys/stat.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for stdlib.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for string.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for memory.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for strings.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for inttypes.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for stdint.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7972: checking for unistd.h
|
|
configure:7972: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7972: $? = 0
|
|
configure:7972: result: yes
|
|
configure:7986: checking for dlfcn.h
|
|
configure:7986: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:7986: $? = 0
|
|
configure:7986: result: yes
|
|
configure:8192: checking for objdir
|
|
configure:8207: result: .libs
|
|
configure:8478: checking if gcc supports -fno-rtti -fno-exceptions
|
|
configure:8496: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -fno-rtti -fno-exceptions conftest.c >&5
|
|
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C
|
|
configure:8500: $? = 0
|
|
configure:8513: result: no
|
|
configure:8840: checking for gcc option to produce PIC
|
|
configure:8847: result: -fPIC -DPIC
|
|
configure:8855: checking if gcc PIC flag -fPIC -DPIC works
|
|
configure:8873: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -fPIC -DPIC -DPIC conftest.c >&5
|
|
configure:8877: $? = 0
|
|
configure:8890: result: yes
|
|
configure:8919: checking if gcc static flag -static works
|
|
configure:8947: result: no
|
|
configure:8962: checking if gcc supports -c -o file.o
|
|
configure:8983: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -o out/conftest2.o conftest.c >&5
|
|
configure:8987: $? = 0
|
|
configure:9009: result: yes
|
|
configure:9017: checking if gcc supports -c -o file.o
|
|
configure:9064: result: yes
|
|
configure:9097: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:10250: result: yes
|
|
configure:10287: checking whether -lc should be explicitly linked in
|
|
configure:10295: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:10298: $? = 0
|
|
configure:10313: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1
|
|
configure:10316: $? = 0
|
|
configure:10330: result: no
|
|
configure:10490: checking dynamic linker characteristics
|
|
configure:11001: gcc -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib -Wl,-rpath -Wl,/foo conftest.c -lstdc++ >&5
|
|
configure:11001: $? = 0
|
|
configure:11223: result: GNU/Linux ld.so
|
|
configure:11330: checking how to hardcode library paths into programs
|
|
configure:11355: result: immediate
|
|
configure:11895: checking whether stripping libraries is possible
|
|
configure:11900: result: yes
|
|
configure:11935: checking if libtool supports shared libraries
|
|
configure:11937: result: yes
|
|
configure:11940: checking whether to build shared libraries
|
|
configure:11961: result: yes
|
|
configure:11964: checking whether to build static libraries
|
|
configure:11968: result: yes
|
|
configure:12050: checking for gcc
|
|
configure:12077: result: gcc
|
|
configure:12142: checking for g++
|
|
configure:12158: found /usr/bin/g++
|
|
configure:12169: result: g++
|
|
configure:12191: checking for gcc option to accept ISO C99
|
|
configure:12340: gcc -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
conftest.c:74: error: expected ';', ',' or ')' before 'text'
|
|
conftest.c: In function 'main':
|
|
conftest.c:128: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'newvar'
|
|
conftest.c:128: error: 'newvar' undeclared (first use in this function)
|
|
conftest.c:128: error: (Each undeclared identifier is reported only once
|
|
conftest.c:128: error: for each function it appears in.)
|
|
conftest.c:138: error: 'for' loop initial declarations are only allowed in C99 mode
|
|
conftest.c:138: note: use option -std=c99 or -std=gnu99 to compile your code
|
|
configure:12340: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| /* end confdefs.h. */
|
|
| #include <stdarg.h>
|
|
| #include <stdbool.h>
|
|
| #include <stdlib.h>
|
|
| #include <wchar.h>
|
|
| #include <stdio.h>
|
|
|
|
|
| // Check varargs macros. These examples are taken from C99 6.10.3.5.
|
|
| #define debug(...) fprintf (stderr, __VA_ARGS__)
|
|
| #define showlist(...) puts (#__VA_ARGS__)
|
|
| #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__))
|
|
| static void
|
|
| test_varargs_macros (void)
|
|
| {
|
|
| int x = 1234;
|
|
| int y = 5678;
|
|
| debug ("Flag");
|
|
| debug ("X = %d\n", x);
|
|
| showlist (The first, second, and third items.);
|
|
| report (x>y, "x is %d but y is %d", x, y);
|
|
| }
|
|
|
|
|
| // Check long long types.
|
|
| #define BIG64 18446744073709551615ull
|
|
| #define BIG32 4294967295ul
|
|
| #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0)
|
|
| #if !BIG_OK
|
|
| your preprocessor is broken;
|
|
| #endif
|
|
| #if BIG_OK
|
|
| #else
|
|
| your preprocessor is broken;
|
|
| #endif
|
|
| static long long int bignum = -9223372036854775807LL;
|
|
| static unsigned long long int ubignum = BIG64;
|
|
|
|
|
| struct incomplete_array
|
|
| {
|
|
| int datasize;
|
|
| double data[];
|
|
| };
|
|
|
|
|
| struct named_init {
|
|
| int number;
|
|
| const wchar_t *name;
|
|
| double average;
|
|
| };
|
|
|
|
|
| typedef const char *ccp;
|
|
|
|
|
| static inline int
|
|
| test_restrict (ccp restrict text)
|
|
| {
|
|
| // See if C++-style comments work.
|
|
| // Iterate through items via the restricted pointer.
|
|
| // Also check for declarations in for loops.
|
|
| for (unsigned int i = 0; *(text+i) != '\0'; ++i)
|
|
| continue;
|
|
| return 0;
|
|
| }
|
|
|
|
|
| // Check varargs and va_copy.
|
|
| static void
|
|
| test_varargs (const char *format, ...)
|
|
| {
|
|
| va_list args;
|
|
| va_start (args, format);
|
|
| va_list args_copy;
|
|
| va_copy (args_copy, args);
|
|
|
|
|
| const char *str;
|
|
| int number;
|
|
| float fnumber;
|
|
|
|
|
| while (*format)
|
|
| {
|
|
| switch (*format++)
|
|
| {
|
|
| case 's': // string
|
|
| str = va_arg (args_copy, const char *);
|
|
| break;
|
|
| case 'd': // int
|
|
| number = va_arg (args_copy, int);
|
|
| break;
|
|
| case 'f': // float
|
|
| fnumber = va_arg (args_copy, double);
|
|
| break;
|
|
| default:
|
|
| break;
|
|
| }
|
|
| }
|
|
| va_end (args_copy);
|
|
| va_end (args);
|
|
| }
|
|
|
|
|
| int
|
|
| main ()
|
|
| {
|
|
|
|
|
| // Check bool.
|
|
| _Bool success = false;
|
|
|
|
|
| // Check restrict.
|
|
| if (test_restrict ("String literal") == 0)
|
|
| success = true;
|
|
| char *restrict newvar = "Another string";
|
|
|
|
|
| // Check varargs.
|
|
| test_varargs ("s, d' f .", "string", 65, 34.234);
|
|
| test_varargs_macros ();
|
|
|
|
|
| // Check flexible array members.
|
|
| struct incomplete_array *ia =
|
|
| malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10));
|
|
| ia->datasize = 10;
|
|
| for (int i = 0; i < ia->datasize; ++i)
|
|
| ia->data[i] = i * 1.234;
|
|
|
|
|
| // Check named initializers.
|
|
| struct named_init ni = {
|
|
| .number = 34,
|
|
| .name = L"Test wide string",
|
|
| .average = 543.34343,
|
|
| };
|
|
|
|
|
| ni.number = 58;
|
|
|
|
|
| int dynamic_array[ni.number];
|
|
| dynamic_array[ni.number - 1] = 543;
|
|
|
|
|
| // work around unused variable warnings
|
|
| return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x'
|
|
| || dynamic_array[ni.number - 1] != 543);
|
|
|
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:12340: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:12340: $? = 0
|
|
configure:12360: result: -std=gnu99
|
|
configure:12369: checking for C/C++ restrict keyword
|
|
configure:12394: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:12394: $? = 0
|
|
configure:12402: result: __restrict
|
|
configure:12423: checking for gcc -std=gnu99 option to support OpenMP
|
|
configure:12438: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
conftest.c:27: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'me'
|
|
In file included from conftest.c:29:
|
|
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:76: error: expected ')' before '*' token
|
|
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:77: error: expected ')' before '*' token
|
|
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:78: error: expected ')' before '*' token
|
|
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:79: error: expected ')' before '*' token
|
|
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:80: error: expected ')' before '*' token
|
|
configure:12438: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
|
|
|
| #ifndef _OPENMP
|
|
| choke me
|
|
| #endif
|
|
| #include <omp.h>
|
|
| int main () { return omp_get_num_threads (); }
|
|
|
|
|
configure:12455: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:12455: $? = 0
|
|
configure:12469: result: -fopenmp
|
|
configure:12523: checking for ar
|
|
configure:12550: result: ar
|
|
configure:12707: checking for ld
|
|
configure:12734: result: /usr/bin/ld -m elf_x86_64
|
|
configure:12799: checking for nm
|
|
configure:12826: result: /usr/bin/nm -B
|
|
configure:12891: checking for ar
|
|
configure:12918: result: ar
|
|
configure:12983: checking for as
|
|
configure:12999: found /usr/bin/as
|
|
configure:13010: result: as
|
|
configure:13075: checking for dlltool
|
|
configure:13102: result: false
|
|
configure:13167: checking for objdump
|
|
configure:13194: result: objdump
|
|
configure:13259: checking for strip
|
|
configure:13286: result: strip
|
|
configure:13351: checking for ranlib
|
|
configure:13378: result: ranlib
|
|
configure:13513: checking for C++ compiler version
|
|
configure:13522: g++ --version >&5
|
|
g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)
|
|
Copyright (C) 2010 Free Software Foundation, Inc.
|
|
This is free software; see the source for copying conditions. There is NO
|
|
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
|
|
|
|
configure:13533: $? = 0
|
|
configure:13522: g++ -v >&5
|
|
Using built-in specs.
|
|
Target: x86_64-redhat-linux
|
|
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
|
|
Thread model: posix
|
|
gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC)
|
|
configure:13533: $? = 0
|
|
configure:13522: g++ -V >&5
|
|
g++: '-V' option must have argument
|
|
configure:13533: $? = 1
|
|
configure:13522: g++ -qversion >&5
|
|
g++: unrecognized option '-qversion'
|
|
g++: no input files
|
|
configure:13533: $? = 1
|
|
configure:13537: checking whether we are using the GNU C++ compiler
|
|
configure:13556: g++ -c -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp >&5
|
|
configure:13556: $? = 0
|
|
configure:13565: result: yes
|
|
configure:13574: checking whether g++ accepts -g
|
|
configure:13594: g++ -c -g -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp >&5
|
|
configure:13594: $? = 0
|
|
configure:13635: result: yes
|
|
configure:13660: checking dependency style of g++
|
|
configure:13771: result: gcc3
|
|
configure:13804: checking how to run the C++ preprocessor
|
|
configure:13831: g++ -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp
|
|
configure:13831: $? = 0
|
|
configure:13845: g++ -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp
|
|
conftest.cpp:25:28: error: ac_nonexistent.h: No such file or directory
|
|
configure:13845: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:13870: result: g++ -E
|
|
configure:13890: g++ -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp
|
|
configure:13890: $? = 0
|
|
configure:13904: g++ -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp
|
|
conftest.cpp:25:28: error: ac_nonexistent.h: No such file or directory
|
|
configure:13904: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| /* end confdefs.h. */
|
|
| #include <ac_nonexistent.h>
|
|
configure:14073: checking for ld used by g++
|
|
configure:14140: result: /usr/bin/ld -m elf_x86_64
|
|
configure:14147: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld
|
|
configure:14162: result: yes
|
|
configure:14217: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:15222: result: yes
|
|
configure:15258: g++ -c -g -O2 -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.cpp >&5
|
|
configure:15261: $? = 0
|
|
configure:15781: checking for g++ option to produce PIC
|
|
configure:15788: result: -fPIC -DPIC
|
|
configure:15796: checking if g++ PIC flag -fPIC -DPIC works
|
|
configure:15814: g++ -c -g -O2 -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -fPIC -DPIC -DPIC conftest.cpp >&5
|
|
configure:15818: $? = 0
|
|
configure:15831: result: yes
|
|
configure:15854: checking if g++ static flag -static works
|
|
configure:15882: result: no
|
|
configure:15894: checking if g++ supports -c -o file.o
|
|
configure:15915: g++ -c -g -O2 -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -o out/conftest2.o conftest.cpp >&5
|
|
configure:15919: $? = 0
|
|
configure:15941: result: yes
|
|
configure:15946: checking if g++ supports -c -o file.o
|
|
configure:15993: result: yes
|
|
configure:16023: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
|
|
configure:16059: result: yes
|
|
configure:16200: checking dynamic linker characteristics
|
|
configure:16867: result: GNU/Linux ld.so
|
|
configure:16920: checking how to hardcode library paths into programs
|
|
configure:16945: result: immediate
|
|
configure:16997: checking for special C compiler options needed for large files
|
|
configure:17042: result: no
|
|
configure:17048: checking for _FILE_OFFSET_BITS value needed for large files
|
|
configure:17073: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17073: $? = 0
|
|
configure:17105: result: no
|
|
configure:17196: checking for stdlib.h
|
|
configure:17196: result: yes
|
|
configure:17196: checking for unistd.h
|
|
configure:17196: result: yes
|
|
configure:17196: checking for sys/param.h
|
|
configure:17196: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17196: $? = 0
|
|
configure:17196: result: yes
|
|
configure:17216: checking for getpagesize
|
|
configure:17216: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:17216: $? = 0
|
|
configure:17216: result: yes
|
|
configure:17225: checking for working mmap
|
|
configure:17372: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:17372: $? = 0
|
|
configure:17372: ./conftest
|
|
configure:17372: $? = 0
|
|
configure:17382: result: yes
|
|
configure:17393: checking for malloc in -lmalloc
|
|
configure:17418: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lmalloc -lstdc++ >&5
|
|
conftest.c:37: warning: conflicting types for built-in function 'malloc'
|
|
/usr/bin/ld: cannot find -lmalloc
|
|
collect2: ld returned 1 exit status
|
|
configure:17418: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char malloc ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return malloc ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17427: result: no
|
|
configure:17440: checking for struct stat.st_blksize
|
|
configure:17440: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17440: $? = 0
|
|
configure:17440: result: yes
|
|
configure:17454: checking sys/resource.h usability
|
|
configure:17454: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17454: $? = 0
|
|
configure:17454: result: yes
|
|
configure:17454: checking sys/resource.h presence
|
|
configure:17454: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17454: $? = 0
|
|
configure:17454: result: yes
|
|
configure:17454: checking for sys/resource.h
|
|
configure:17454: result: yes
|
|
configure:17466: checking sys/times.h usability
|
|
configure:17466: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17466: $? = 0
|
|
configure:17466: result: yes
|
|
configure:17466: checking sys/times.h presence
|
|
configure:17466: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17466: $? = 0
|
|
configure:17466: result: yes
|
|
configure:17466: checking for sys/times.h
|
|
configure:17466: result: yes
|
|
configure:17478: checking malloc.h usability
|
|
configure:17478: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17478: $? = 0
|
|
configure:17478: result: yes
|
|
configure:17478: checking malloc.h presence
|
|
configure:17478: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17478: $? = 0
|
|
configure:17478: result: yes
|
|
configure:17478: checking for malloc.h
|
|
configure:17478: result: yes
|
|
configure:17490: checking glob.h usability
|
|
configure:17490: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17490: $? = 0
|
|
configure:17490: result: yes
|
|
configure:17490: checking glob.h presence
|
|
configure:17490: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17490: $? = 0
|
|
configure:17490: result: yes
|
|
configure:17490: checking for glob.h
|
|
configure:17490: result: yes
|
|
configure:17502: checking fnmatch.h usability
|
|
configure:17502: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17502: $? = 0
|
|
configure:17502: result: yes
|
|
configure:17502: checking fnmatch.h presence
|
|
configure:17502: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17502: $? = 0
|
|
configure:17502: result: yes
|
|
configure:17502: checking for fnmatch.h
|
|
configure:17502: result: yes
|
|
configure:17514: checking wordexp.h usability
|
|
configure:17514: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17514: $? = 0
|
|
configure:17514: result: yes
|
|
configure:17514: checking wordexp.h presence
|
|
configure:17514: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:17514: $? = 0
|
|
configure:17514: result: yes
|
|
configure:17514: checking for wordexp.h
|
|
configure:17514: result: yes
|
|
configure:17528: checking for mallinfo
|
|
configure:17528: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:17528: $? = 0
|
|
configure:17528: result: yes
|
|
configure:17541: checking for getrlimit
|
|
configure:17541: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:17541: $? = 0
|
|
configure:17541: result: yes
|
|
configure:17552: checking for gethostname
|
|
configure:17552: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lstdc++ >&5
|
|
configure:17552: $? = 0
|
|
configure:17552: result: yes
|
|
configure:17620: checking for floor in -lm
|
|
configure:17645: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
conftest.c:51: warning: conflicting types for built-in function 'floor'
|
|
configure:17645: $? = 0
|
|
configure:17654: result: yes
|
|
configure:17667: checking whether isnan is declared
|
|
configure:17667: gcc -std=gnu99 -c -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:17667: $? = 0
|
|
configure:17667: result: yes
|
|
configure:17682: checking for sqrtl
|
|
configure:17682: gcc -std=gnu99 -o conftest -fPIC -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
conftest.c:69: warning: conflicting types for built-in function 'sqrtl'
|
|
configure:17682: $? = 0
|
|
configure:17682: result: yes
|
|
configure:17703: checking for DATA support
|
|
configure:17717: result:
|
|
configure:17860: checking if compiler needs -Werror to reject unknown flags
|
|
configure:17876: gcc -std=gnu99 -c -fPIC -fopenmp -Werror -Wunknown-warning-option -Wsizeof-array-argument -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
cc1: error: unrecognized command line option "-Wunknown-warning-option"
|
|
cc1: error: unrecognized command line option "-Wsizeof-array-argument"
|
|
configure:17876: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| /* end confdefs.h. */
|
|
| int foo(void);
|
|
| int
|
|
| main ()
|
|
| {
|
|
| foo()
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17881: result: no
|
|
configure:17947: checking for the pthreads library -lpthreads
|
|
configure:17985: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lpthreads -lm -lstdc++ >&5
|
|
/usr/bin/ld: cannot find -lpthreads
|
|
collect2: ld returned 1 exit status
|
|
configure:17985: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| /* end confdefs.h. */
|
|
| #include <pthread.h>
|
|
| static void routine(void *a) { a = 0; }
|
|
| static void *start_routine(void *a) { return a; }
|
|
| int
|
|
| main ()
|
|
| {
|
|
| pthread_t th; pthread_attr_t attr;
|
|
| pthread_create(&th, 0, start_routine, 0);
|
|
| pthread_join(th, 0);
|
|
| pthread_attr_init(&attr);
|
|
| pthread_cleanup_push(routine, 0);
|
|
| pthread_cleanup_pop(0) /* ; */
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:17994: result: no
|
|
configure:17892: checking whether pthreads work without any flags
|
|
configure:17985: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
configure:17985: $? = 0
|
|
configure:17994: result: yes
|
|
configure:18013: checking for joinable pthread attribute
|
|
configure:18028: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
configure:18028: $? = 0
|
|
configure:18034: result: PTHREAD_CREATE_JOINABLE
|
|
configure:18044: checking if more special flags are required for pthreads
|
|
configure:18059: result: no
|
|
configure:18065: checking for PTHREAD_PRIO_INHERIT
|
|
configure:18082: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
conftest.c: In function 'main':
|
|
conftest.c:52: error: 'PTHREAD_PRIO_INHERIT' undeclared (first use in this function)
|
|
conftest.c:52: error: (Each undeclared identifier is reported only once
|
|
conftest.c:52: error: for each function it appears in.)
|
|
configure:18082: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| /* end confdefs.h. */
|
|
| #include <pthread.h>
|
|
| int
|
|
| main ()
|
|
| {
|
|
| int i = PTHREAD_PRIO_INHERIT;
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18091: result: no
|
|
configure:18429: checking zlib.h usability
|
|
configure:18429: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:18429: $? = 0
|
|
configure:18429: result: yes
|
|
configure:18429: checking zlib.h presence
|
|
configure:18429: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:18429: $? = 0
|
|
configure:18429: result: yes
|
|
configure:18429: checking for zlib.h
|
|
configure:18429: result: yes
|
|
configure:18439: checking for library containing deflate
|
|
configure:18470: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lm -lstdc++ >&5
|
|
/tmp/ccOdXxHq.o: In function `main':
|
|
conftest.c:(.text+0xa): undefined reference to `deflate'
|
|
collect2: ld returned 1 exit status
|
|
configure:18470: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char deflate ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return deflate ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18470: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lz -lm -lstdc++ >&5
|
|
configure:18470: $? = 0
|
|
configure:18487: result: -lz
|
|
configure:18677: checking for szlib library
|
|
configure:18679: result: suppressed
|
|
configure:18845: checking hdf5.h usability
|
|
configure:18845: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:18845: $? = 0
|
|
configure:18845: result: yes
|
|
configure:18845: checking hdf5.h presence
|
|
configure:18845: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:18845: $? = 0
|
|
configure:18845: result: yes
|
|
configure:18845: checking for hdf5.h
|
|
configure:18845: result: yes
|
|
configure:18855: checking for library containing H5Fopen
|
|
configure:18886: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lz -lm -lstdc++ >&5
|
|
/tmp/ccvNvmHP.o: In function `main':
|
|
conftest.c:(.text+0xa): undefined reference to `H5Fopen'
|
|
collect2: ld returned 1 exit status
|
|
configure:18886: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| #define HAVE_LIBZ 1
|
|
| #define HAVE_HDF5_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5Fopen ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5Fopen ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18886: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lhdf5 -lz -lm -lstdc++ >&5
|
|
configure:18886: $? = 0
|
|
configure:18903: result: -lhdf5
|
|
configure:18915: checking for library containing H5DSis_scale
|
|
configure:18946: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lhdf5 -lz -lm -lstdc++ >&5
|
|
/tmp/ccwIFVd8.o: In function `main':
|
|
conftest.c:(.text+0xa): undefined reference to `H5DSis_scale'
|
|
collect2: ld returned 1 exit status
|
|
configure:18946: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| #define HAVE_LIBZ 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char H5DSis_scale ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return H5DSis_scale ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:18946: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lhdf5_hl -lhdf5 -lz -lm -lstdc++ >&5
|
|
configure:18946: $? = 0
|
|
configure:18963: result: -lhdf5_hl
|
|
configure:19185: checking netcdf.h usability
|
|
configure:19185: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:19185: $? = 0
|
|
configure:19185: result: yes
|
|
configure:19185: checking netcdf.h presence
|
|
configure:19185: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:19185: $? = 0
|
|
configure:19185: result: yes
|
|
configure:19185: checking for netcdf.h
|
|
configure:19185: result: yes
|
|
configure:19195: checking for library containing nc_open
|
|
configure:19226: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lhdf5_hl -lhdf5 -lz -lm -lstdc++ >&5
|
|
/tmp/ccWCPTUA.o: In function `main':
|
|
conftest.c:(.text+0xa): undefined reference to `nc_open'
|
|
collect2: ld returned 1 exit status
|
|
configure:19226: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| #define HAVE_LIBZ 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char nc_open ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return nc_open ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19226: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lz -lm -lstdc++ >&5
|
|
configure:19226: $? = 0
|
|
configure:19243: result: -lnetcdf
|
|
configure:19259: checking nc-config script
|
|
configure:19263: checking for nc-config
|
|
configure:19293: result: no
|
|
configure:19351: result: Could not find nc-config! go on with default configuration
|
|
configure:19597: checking for the CMOR library
|
|
configure:19599: result: suppressed
|
|
configure:19699: checking grib_api.h usability
|
|
configure:19699: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:19699: $? = 0
|
|
configure:19699: result: yes
|
|
configure:19699: checking grib_api.h presence
|
|
configure:19699: gcc -E -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c
|
|
configure:19699: $? = 0
|
|
configure:19699: result: yes
|
|
configure:19699: checking for grib_api.h
|
|
configure:19699: result: yes
|
|
configure:19709: checking for library containing grib_get_message
|
|
configure:19740: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lz -lm -lstdc++ >&5
|
|
/tmp/ccRHAoHX.o: In function `main':
|
|
conftest.c:(.text+0xa): undefined reference to `grib_get_message'
|
|
collect2: ld returned 1 exit status
|
|
configure:19740: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| #define HAVE_LIBZ 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_GRIB_API_H 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| /* Override any GCC internal prototype to avoid an error.
|
|
| Use char because int might match the return type of a GCC
|
|
| builtin and then its argument prototype would still apply. */
|
|
| #ifdef __cplusplus
|
|
| extern "C"
|
|
| #endif
|
|
| char grib_get_message ();
|
|
| int
|
|
| main ()
|
|
| {
|
|
| return grib_get_message ();
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:19740: gcc -std=gnu99 -o conftest -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib conftest.c -lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lz -lm -lstdc++ >&5
|
|
configure:19740: $? = 0
|
|
configure:19757: result: -lgrib_api
|
|
configure:19790: checking for GRIB support
|
|
configure:19807: result: yes
|
|
configure:19813: checking for CGRIBEX support
|
|
configure:19830: result: yes
|
|
configure:19836: checking for SERVICE support
|
|
configure:19853: result: yes
|
|
configure:19859: checking for EXTRA support
|
|
configure:19876: result: yes
|
|
configure:19882: checking for IEG support
|
|
configure:19899: result: yes
|
|
configure:19905: checking for FFTW3 support
|
|
configure:20168: checking for the PROJ library
|
|
configure:20170: result: suppressed
|
|
configure:20350: checking for the CURL library
|
|
configure:20352: result: suppressed
|
|
configure:20544: checking for the UDUNITS2 library
|
|
configure:20546: result: suppressed
|
|
configure:20726: checking for MAGICS library
|
|
configure:20728: result: suppressed
|
|
configure:20931: checking for XML2 library
|
|
configure:20933: result: suppressed
|
|
configure:20952: checking for build a separate CDI library and link CDO to it
|
|
configure:20969: result: no
|
|
configure:20993: checking for building an additional static CDO binary
|
|
configure:21006: result: no
|
|
configure:21025: checking if x86/amd64 assembler speaks SSE4.2
|
|
configure:21048: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:21048: $? = 0
|
|
configure:21051: result: yes
|
|
configure:21076: checking if x86/amd64 assembler speaks AVX
|
|
configure:21097: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
configure:21097: $? = 0
|
|
configure:21100: result: yes
|
|
configure:21125: checking if x86/amd64 assembler speaks AVX2
|
|
configure:21146: gcc -std=gnu99 -c -fPIC -fopenmp -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include conftest.c >&5
|
|
conftest.c: Assembler messages:
|
|
conftest.c:68: Error: no such instruction: `vpsravd (%rsp),%ymm8,%ymm7'
|
|
conftest.c:70: Error: suffix or operands invalid for `vpaddb'
|
|
configure:21146: $? = 1
|
|
configure: failed program was:
|
|
| /* confdefs.h */
|
|
| #define PACKAGE_NAME "cdo"
|
|
| #define PACKAGE_TARNAME "cdo"
|
|
| #define PACKAGE_VERSION "1.7.0"
|
|
| #define PACKAGE_STRING "cdo 1.7.0"
|
|
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
|
|
| #define PACKAGE_URL ""
|
|
| #define CDO "1.7.0"
|
|
| #define PACKAGE "cdo"
|
|
| #define VERSION "1.7.0"
|
|
| #define STDC_HEADERS 1
|
|
| #define HAVE_SYS_TYPES_H 1
|
|
| #define HAVE_SYS_STAT_H 1
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_STRING_H 1
|
|
| #define HAVE_MEMORY_H 1
|
|
| #define HAVE_STRINGS_H 1
|
|
| #define HAVE_INTTYPES_H 1
|
|
| #define HAVE_STDINT_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_DLFCN_H 1
|
|
| #define LT_OBJDIR ".libs/"
|
|
| #define restrict __restrict
|
|
| #define HAVE_STDLIB_H 1
|
|
| #define HAVE_UNISTD_H 1
|
|
| #define HAVE_SYS_PARAM_H 1
|
|
| #define HAVE_GETPAGESIZE 1
|
|
| #define HAVE_MMAP 1
|
|
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
|
|
| #define HAVE_SYS_RESOURCE_H 1
|
|
| #define HAVE_SYS_TIMES_H 1
|
|
| #define HAVE_MALLOC_H 1
|
|
| #define HAVE_GLOB_H 1
|
|
| #define HAVE_FNMATCH_H 1
|
|
| #define HAVE_WORDEXP_H 1
|
|
| #define HAVE_MALLINFO 1
|
|
| #define HAVE_GETRLIMIT 1
|
|
| #define HAVE_GETHOSTNAME 1
|
|
| #define COMP_VERSION "gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)"
|
|
| #define USER_NAME "wrf"
|
|
| #define HOST_NAME "service"
|
|
| #define SYSTEM_TYPE "x86_64-unknown-linux-gnu"
|
|
| #define HAVE_LIBM 1
|
|
| #define HAVE_DECL_ISNAN 1
|
|
| #define HAVE_SQRTL 1
|
|
| #define ENABLE_DATA 1
|
|
| #define HAVE_LIBPTHREAD 1
|
|
| #define HAVE_ZLIB_H 1
|
|
| #define HAVE_LIBZ 1
|
|
| #define HAVE_HDF5_H 1
|
|
| #define HAVE_LIBHDF5 1
|
|
| #define HAVE_NETCDF_H 1
|
|
| #define HAVE_LIBNETCDF 1
|
|
| #define HAVE_GRIB_API_H 1
|
|
| #define HAVE_LIBGRIB_API 1
|
|
| #define HAVE_LIBGRIB 1
|
|
| #define HAVE_LIBCGRIBEX 1
|
|
| #define HAVE_LIBSERVICE 1
|
|
| #define HAVE_LIBEXTRA 1
|
|
| #define HAVE_LIBIEG 1
|
|
| /* end confdefs.h. */
|
|
|
|
|
| int
|
|
| main ()
|
|
| {
|
|
|
|
|
| do { long long int x;
|
|
| __asm__ __volatile__(
|
|
| "vpsravd (%%rsp), %%ymm8, %%ymm7" : : : "xmm7", "xmm8" );
|
|
| __asm__ __volatile__(
|
|
| "vpaddb %%ymm6,%%ymm7,%%ymm8" : : : "xmm6","xmm7","xmm8"); }
|
|
| while (0)
|
|
|
|
|
| ;
|
|
| return 0;
|
|
| }
|
|
configure:21155: result: no
|
|
configure:21192: checking for gawk
|
|
configure:21219: result: gawk
|
|
configure:21354: checking that generated files are newer than configure
|
|
configure:21360: result: done
|
|
configure:21415: creating ./config.status
|
|
|
|
## ---------------------- ##
|
|
## Running config.status. ##
|
|
## ---------------------- ##
|
|
|
|
This file was extended by cdo config.status 1.7.0, which was
|
|
generated by GNU Autoconf 2.68. Invocation command line was
|
|
|
|
CONFIG_FILES =
|
|
CONFIG_HEADERS =
|
|
CONFIG_LINKS =
|
|
CONFIG_COMMANDS =
|
|
$ ./config.status
|
|
|
|
on service
|
|
|
|
config.status:1296: creating test/File.test
|
|
config.status:1296: creating test/Read_grib.test
|
|
config.status:1296: creating test/Read_netcdf.test
|
|
config.status:1296: creating test/Copy_netcdf.test
|
|
config.status:1296: creating test/Cat.test
|
|
config.status:1296: creating test/Gridarea.test
|
|
config.status:1296: creating test/Genweights.test
|
|
config.status:1296: creating test/Remap.test
|
|
config.status:1296: creating test/Select.test
|
|
config.status:1296: creating test/Spectral.test
|
|
config.status:1296: creating test/Timstat.test
|
|
config.status:1296: creating test/Vertint.test
|
|
config.status:1296: creating test/Ymonstat.test
|
|
config.status:1296: creating test/Fldstat.test
|
|
config.status:1296: creating test/Fldpctl.test
|
|
config.status:1296: creating test/Ensstat.test
|
|
config.status:1296: creating test/Enspctl.test
|
|
config.status:1296: creating test/Afterburner.test
|
|
config.status:1296: creating test/Detrend.test
|
|
config.status:1296: creating test/Arith.test
|
|
config.status:1296: creating test/Gradsdes.test
|
|
config.status:1296: creating test/wildcard.test
|
|
config.status:1296: creating Makefile
|
|
config.status:1296: creating src/Makefile
|
|
config.status:1296: creating contrib/Makefile
|
|
config.status:1296: creating test/Makefile
|
|
config.status:1296: creating test/data/Makefile
|
|
config.status:1296: creating cdo.spec
|
|
config.status:1296: creating cdo.settings
|
|
config.status:1296: creating src/config.h
|
|
config.status:1477: src/config.h is unchanged
|
|
config.status:1525: executing depfiles commands
|
|
config.status:1525: executing libtool commands
|
|
configure:24032: === configuring in libcdi (/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi)
|
|
configure:24095: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local' '--with-netcdf=/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib' '--with-hdf5=/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib' '--with-grib_api=/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/' 'CFLAGS=-fPIC' 'LDFLAGS=-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib' 'LIBS=-lstdc++' 'CPPFLAGS=-I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include' --cache-file=/dev/null --srcdir=.
|
|
configure:24100: error: ./configure failed for libcdi
|
|
|
|
## ---------------- ##
|
|
## Cache variables. ##
|
|
## ---------------- ##
|
|
|
|
ac_cv_build=x86_64-unknown-linux-gnu
|
|
ac_cv_c_compiler_gnu=yes
|
|
ac_cv_c_restrict=__restrict
|
|
ac_cv_cxx_compiler_gnu=yes
|
|
ac_cv_env_CCC_set=
|
|
ac_cv_env_CCC_value=
|
|
ac_cv_env_CC_set=
|
|
ac_cv_env_CC_value=
|
|
ac_cv_env_CFLAGS_set=set
|
|
ac_cv_env_CFLAGS_value=-fPIC
|
|
ac_cv_env_CPPFLAGS_set=set
|
|
ac_cv_env_CPPFLAGS_value='-I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include'
|
|
ac_cv_env_CPP_set=
|
|
ac_cv_env_CPP_value=
|
|
ac_cv_env_CXXCPP_set=
|
|
ac_cv_env_CXXCPP_value=
|
|
ac_cv_env_CXXFLAGS_set=
|
|
ac_cv_env_CXXFLAGS_value=
|
|
ac_cv_env_CXX_set=
|
|
ac_cv_env_CXX_value=
|
|
ac_cv_env_LDFLAGS_set=set
|
|
ac_cv_env_LDFLAGS_value='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib'
|
|
ac_cv_env_LIBS_set=set
|
|
ac_cv_env_LIBS_value=-lstdc++
|
|
ac_cv_env_build_alias_set=
|
|
ac_cv_env_build_alias_value=
|
|
ac_cv_env_host_alias_set=
|
|
ac_cv_env_host_alias_value=
|
|
ac_cv_env_target_alias_set=
|
|
ac_cv_env_target_alias_value=
|
|
ac_cv_func_gethostname=yes
|
|
ac_cv_func_getpagesize=yes
|
|
ac_cv_func_getrlimit=yes
|
|
ac_cv_func_mallinfo=yes
|
|
ac_cv_func_mmap_fixed_mapped=yes
|
|
ac_cv_func_sqrtl=yes
|
|
ac_cv_have_decl_isnan=yes
|
|
ac_cv_header_dlfcn_h=yes
|
|
ac_cv_header_fnmatch_h=yes
|
|
ac_cv_header_glob_h=yes
|
|
ac_cv_header_grib_api_h=yes
|
|
ac_cv_header_hdf5_h=yes
|
|
ac_cv_header_inttypes_h=yes
|
|
ac_cv_header_malloc_h=yes
|
|
ac_cv_header_memory_h=yes
|
|
ac_cv_header_netcdf_h=yes
|
|
ac_cv_header_stdc=yes
|
|
ac_cv_header_stdint_h=yes
|
|
ac_cv_header_stdlib_h=yes
|
|
ac_cv_header_string_h=yes
|
|
ac_cv_header_strings_h=yes
|
|
ac_cv_header_sys_param_h=yes
|
|
ac_cv_header_sys_resource_h=yes
|
|
ac_cv_header_sys_stat_h=yes
|
|
ac_cv_header_sys_times_h=yes
|
|
ac_cv_header_sys_types_h=yes
|
|
ac_cv_header_unistd_h=yes
|
|
ac_cv_header_wordexp_h=yes
|
|
ac_cv_header_zlib_h=yes
|
|
ac_cv_host=x86_64-unknown-linux-gnu
|
|
ac_cv_lib_m_floor=yes
|
|
ac_cv_lib_malloc_malloc=no
|
|
ac_cv_member_struct_stat_st_blksize=yes
|
|
ac_cv_objext=o
|
|
ac_cv_path_EGREP='/bin/grep -E'
|
|
ac_cv_path_FGREP='/bin/grep -F'
|
|
ac_cv_path_GREP=/bin/grep
|
|
ac_cv_path_SED=/bin/sed
|
|
ac_cv_path_install='/usr/bin/install -c'
|
|
ac_cv_path_mkdir=/bin/mkdir
|
|
ac_cv_prog_AWK=gawk
|
|
ac_cv_prog_CPP='gcc -E'
|
|
ac_cv_prog_CXXCPP='g++ -E'
|
|
ac_cv_prog_ac_ct_AR=ar
|
|
ac_cv_prog_ac_ct_AS=as
|
|
ac_cv_prog_ac_ct_CC=gcc
|
|
ac_cv_prog_ac_ct_CXX=g++
|
|
ac_cv_prog_ac_ct_DLLTOOL=false
|
|
ac_cv_prog_ac_ct_LD='/usr/bin/ld -m elf_x86_64'
|
|
ac_cv_prog_ac_ct_NM='/usr/bin/nm -B'
|
|
ac_cv_prog_ac_ct_OBJDUMP=objdump
|
|
ac_cv_prog_ac_ct_RANLIB=ranlib
|
|
ac_cv_prog_ac_ct_STRIP=strip
|
|
ac_cv_prog_c_openmp=-fopenmp
|
|
ac_cv_prog_cc_c89=
|
|
ac_cv_prog_cc_c99=-std=gnu99
|
|
ac_cv_prog_cc_g=yes
|
|
ac_cv_prog_cxx_g=yes
|
|
ac_cv_prog_make_make_set=yes
|
|
ac_cv_search_H5DSis_scale=-lhdf5_hl
|
|
ac_cv_search_H5Fopen=-lhdf5
|
|
ac_cv_search_deflate=-lz
|
|
ac_cv_search_grib_get_message=-lgrib_api
|
|
ac_cv_search_nc_open=-lnetcdf
|
|
ac_cv_sys_file_offset_bits=no
|
|
ac_cv_sys_largefile_CC=no
|
|
am_cv_CC_dependencies_compiler_type=gcc3
|
|
am_cv_CXX_dependencies_compiler_type=gcc3
|
|
am_cv_ar_interface=ar
|
|
am_cv_make_support_nested_variables=yes
|
|
am_cv_prog_cc_c_o=yes
|
|
ax_cv_PTHREAD_PRIO_INHERIT=no
|
|
lt_cv_ar_at_file=@
|
|
lt_cv_archive_cmds_need_lc=no
|
|
lt_cv_deplibs_check_method=pass_all
|
|
lt_cv_file_magic_cmd='$MAGIC_CMD'
|
|
lt_cv_file_magic_test_file=
|
|
lt_cv_ld_reload_flag=-r
|
|
lt_cv_nm_interface='BSD nm'
|
|
lt_cv_objdir=.libs
|
|
lt_cv_path_LD=/usr/bin/ld
|
|
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
|
|
lt_cv_path_NM='/usr/bin/nm -B'
|
|
lt_cv_path_mainfest_tool=no
|
|
lt_cv_prog_compiler_c_o=yes
|
|
lt_cv_prog_compiler_c_o_CXX=yes
|
|
lt_cv_prog_compiler_pic='-fPIC -DPIC'
|
|
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
|
|
lt_cv_prog_compiler_pic_works=yes
|
|
lt_cv_prog_compiler_pic_works_CXX=yes
|
|
lt_cv_prog_compiler_rtti_exceptions=no
|
|
lt_cv_prog_compiler_static_works=no
|
|
lt_cv_prog_compiler_static_works_CXX=no
|
|
lt_cv_prog_gnu_ld=yes
|
|
lt_cv_prog_gnu_ldcxx=yes
|
|
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
|
|
lt_cv_shlibpath_overrides_runpath=no
|
|
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
|
|
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
|
|
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
|
|
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
|
|
lt_cv_sys_max_cmd_len=1966080
|
|
lt_cv_to_host_file_cmd=func_convert_file_noop
|
|
lt_cv_to_tool_file_cmd=func_convert_file_noop
|
|
|
|
## ----------------- ##
|
|
## Output variables. ##
|
|
## ----------------- ##
|
|
|
|
ACLOCAL='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing aclocal-1.14'
|
|
AMDEPBACKSLASH='\'
|
|
AMDEP_FALSE='#'
|
|
AMDEP_TRUE=''
|
|
AMTAR='$${TAR-tar}'
|
|
AM_BACKSLASH='\'
|
|
AM_CPPFLAGS=''
|
|
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
|
|
AM_DEFAULT_VERBOSITY='1'
|
|
AM_V='$(V)'
|
|
AR='ar'
|
|
AS='as'
|
|
AUTOCONF='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoconf'
|
|
AUTOHEADER='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoheader'
|
|
AUTOMAKE='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing automake-1.14'
|
|
AWK='gawk'
|
|
BUILD_AVX2_TESTS_FALSE=''
|
|
BUILD_AVX2_TESTS_TRUE='#'
|
|
BUILD_AVX_TESTS_FALSE='#'
|
|
BUILD_AVX_TESTS_TRUE=''
|
|
BUILD_SSE42_TESTS_FALSE='#'
|
|
BUILD_SSE42_TESTS_TRUE=''
|
|
CC='gcc -std=gnu99'
|
|
CCDEPMODE='depmode=gcc3'
|
|
CFLAGS='-fPIC -fopenmp '
|
|
CLDFLAGS=''
|
|
CLIBS=''
|
|
CMOR_LIBS=''
|
|
CPP='gcc -E'
|
|
CPPFLAGS='-I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/include/ -I/RHMC/soft/jasper/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/include -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/include -I/usr/local/include/openjpeg-2.1 -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/include'
|
|
CURL_INCLUDE=''
|
|
CURL_LDFLAGS=''
|
|
CXX='g++'
|
|
CXXCPP='g++ -E'
|
|
CXXDEPMODE='depmode=gcc3'
|
|
CXXFLAGS='-g -O2'
|
|
CYGPATH_W='echo'
|
|
DEFS='-DHAVE_CONFIG_H'
|
|
DEPDIR='.deps'
|
|
DLLTOOL='false'
|
|
DSYMUTIL=''
|
|
DUMPBIN=''
|
|
ECHO_C=''
|
|
ECHO_N='-n'
|
|
ECHO_T=''
|
|
EGREP='/bin/grep -E'
|
|
ENABLE_ALL_STATIC_FALSE=''
|
|
ENABLE_ALL_STATIC_TRUE='#'
|
|
ENABLE_CDI_LIB='false'
|
|
ENABLE_CDI_LIB_FALSE=''
|
|
ENABLE_CDI_LIB_TRUE='#'
|
|
ENABLE_CGRIBEX='yes'
|
|
ENABLE_DATA=''
|
|
ENABLE_EXTRA='yes'
|
|
ENABLE_GRIB='yes'
|
|
ENABLE_GRIBAPI='yes'
|
|
ENABLE_IEG='yes'
|
|
ENABLE_MAGICS_FALSE=''
|
|
ENABLE_MAGICS_TRUE='#'
|
|
ENABLE_NC2='no'
|
|
ENABLE_NC4='no'
|
|
ENABLE_NC4HDF5='no'
|
|
ENABLE_NETCDF='yes'
|
|
ENABLE_SERVICE='yes'
|
|
EXEEXT=''
|
|
FCFLAGS=''
|
|
FGREP='/bin/grep -F'
|
|
GREP='/bin/grep'
|
|
GRIB_API_INCLUDE=' -I/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//include'
|
|
GRIB_API_LIBS=' -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//lib -lgrib_api'
|
|
HDF5_INCLUDE=' -I/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/include'
|
|
HDF5_LIBS=' -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -lhdf5'
|
|
HDF5_ROOT='/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib'
|
|
HOST_NAME='service'
|
|
INSTALL_DATA='${INSTALL} -m 644'
|
|
INSTALL_PROGRAM='${INSTALL}'
|
|
INSTALL_SCRIPT='${INSTALL}'
|
|
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
|
|
LD='/usr/bin/ld -m elf_x86_64'
|
|
LDFLAGS='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API//lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib/openjpeg-2.1 -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/libcdi/lib'
|
|
LIBOBJS=''
|
|
LIBS='-lgrib_api -lnetcdf -lhdf5_hl -lhdf5 -lz -lm -lstdc++'
|
|
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
|
|
LIPO=''
|
|
LN_S='ln -s'
|
|
LTLIBOBJS=''
|
|
MAGICS_INCLUDE=''
|
|
MAGICS_LIBS=''
|
|
MAGICS_ROOT=''
|
|
MAINT='#'
|
|
MAINTAINER_MODE_FALSE=''
|
|
MAINTAINER_MODE_TRUE='#'
|
|
MAKEINFO='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing makeinfo'
|
|
MANIFEST_TOOL=':'
|
|
MKDIR_P='/bin/mkdir -p'
|
|
NC_CONFIG=''
|
|
NETCDF_INCLUDE=' -I/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/include'
|
|
NETCDF_LIBS=' -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib/lib -lnetcdf'
|
|
NETCDF_ROOT='/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib'
|
|
NM='/usr/bin/nm -B'
|
|
NMEDIT=''
|
|
OBJDUMP='objdump'
|
|
OBJEXT='o'
|
|
OPENMP_CFLAGS='-fopenmp'
|
|
OTOOL64=''
|
|
OTOOL=''
|
|
PACKAGE='cdo'
|
|
PACKAGE_BUGREPORT='http://mpimet.mpg.de/cdo'
|
|
PACKAGE_NAME='cdo'
|
|
PACKAGE_STRING='cdo 1.7.0'
|
|
PACKAGE_TARNAME='cdo'
|
|
PACKAGE_URL=''
|
|
PACKAGE_VERSION='1.7.0'
|
|
PATH_SEPARATOR=':'
|
|
PROJ_INCLUDE=''
|
|
PROJ_LDFLAGS=''
|
|
PTHREAD_CC='gcc -std=gnu99'
|
|
PTHREAD_CFLAGS=''
|
|
PTHREAD_LIBS=''
|
|
RANLIB='ranlib'
|
|
SED='/bin/sed'
|
|
SET_MAKE=''
|
|
SHELL='/bin/sh'
|
|
STRIP='strip'
|
|
SYSTEM_TYPE='x86_64-unknown-linux-gnu'
|
|
SZLIB_INCLUDE=''
|
|
SZLIB_LIBS=''
|
|
THREADS_INCLUDE=''
|
|
THREADS_LIBS=''
|
|
UDUNITS_INCLUDE=''
|
|
UDUNITS_LDFLAGS=''
|
|
USER_NAME='wrf'
|
|
VERSION='1.7.0'
|
|
XML2_LIBS=''
|
|
ZLIB_INCLUDE=''
|
|
ZLIB_LIBS=' -lz'
|
|
ac_ct_AR='ar'
|
|
ac_ct_CC='gcc'
|
|
ac_ct_CXX='g++'
|
|
ac_ct_DUMPBIN=''
|
|
am__EXEEXT_FALSE=''
|
|
am__EXEEXT_TRUE='#'
|
|
am__fastdepCC_FALSE='#'
|
|
am__fastdepCC_TRUE=''
|
|
am__fastdepCXX_FALSE='#'
|
|
am__fastdepCXX_TRUE=''
|
|
am__include='include'
|
|
am__isrc=''
|
|
am__leading_dot='.'
|
|
am__nodep='_no'
|
|
am__quote=''
|
|
am__tar='$${TAR-tar} chof - "$$tardir"'
|
|
am__untar='$${TAR-tar} xf -'
|
|
ax_pthread_config=''
|
|
bindir='${exec_prefix}/bin'
|
|
build='x86_64-unknown-linux-gnu'
|
|
build_alias=''
|
|
build_cpu='x86_64'
|
|
build_os='linux-gnu'
|
|
build_vendor='unknown'
|
|
datadir='${datarootdir}'
|
|
datarootdir='${prefix}/share'
|
|
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
|
|
dvidir='${docdir}'
|
|
exec_prefix='${prefix}'
|
|
host='x86_64-unknown-linux-gnu'
|
|
host_alias=''
|
|
host_cpu='x86_64'
|
|
host_os='linux-gnu'
|
|
host_vendor='unknown'
|
|
htmldir='${docdir}'
|
|
includedir='${prefix}/include'
|
|
infodir='${datarootdir}/info'
|
|
install_sh='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/install-sh'
|
|
libdir='${exec_prefix}/lib'
|
|
libexecdir='${exec_prefix}/libexec'
|
|
localedir='${datarootdir}/locale'
|
|
localstatedir='${prefix}/var'
|
|
mandir='${datarootdir}/man'
|
|
mkdir_p='$(MKDIR_P)'
|
|
oldincludedir='/usr/include'
|
|
pdfdir='${docdir}'
|
|
prefix='/usr/local'
|
|
program_transform_name='s,x,x,'
|
|
psdir='${docdir}'
|
|
sbindir='${exec_prefix}/sbin'
|
|
sharedstatedir='${prefix}/com'
|
|
subdirs=' libcdi'
|
|
sysconfdir='${prefix}/etc'
|
|
target_alias=''
|
|
|
|
configure: exit 1
|