# ./configure --with-netcdf=yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '0' is supported by ustar format... yes checking whether GID '0' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether to enable maintainer-specific portions of Makefiles... no checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for ar... ar checking the archiver (ar) interface... ar configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/param.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for a Python interpreter with version >= 3.6... python checking for python... /usr/bin/python checking for python version... 3.11 checking for python platform... linux checking for GNU default python prefix... ${prefix} checking for GNU default python exec_prefix... ${exec_prefix} checking for python script directory (pythondir)... ${PYTHON_PREFIX}/lib/python3.11/site-packages checking for python extension module directory (pyexecdir)... ${PYTHON_EXEC_PREFIX}/lib/python3.11/site-packages checking for bash... /bin/bash checking for gcc... (cached) gcc checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for g77... g77 checking whether the compiler supports GNU Fortran 77... yes checking whether g77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for g77 option to produce PIC... -fPIC checking if g77 PIC flag -fPIC works... yes checking if g77 static flag -static works... yes checking if g77 supports -c -o file.o... yes checking if g77 supports -c -o file.o... (cached) yes checking whether the g77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for C/C++ restrict keyword... __restrict__ checking whether g++ supports C++20 features by default... no checking whether g++ supports C++20 features with -std=gnu++20... yes checking for gcc option to support OpenMP... -fopenmp checking for ar... (cached) ar checking for cpp... cpp checking for ld... /usr/bin/ld checking for nm... /usr/bin/nm -B checking for ar... (cached) ar checking for as... as checking for dlltool... false checking for objdump... (cached) objdump checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking for gcc option to enable large file support... -D_FILE_OFFSET_BITS=64 checking for getpagesize... yes checking for working mmap... yes checking for struct stat.st_blksize... yes checking for mallinfo... yes checking for backtrace... yes checking for getrlimit... yes checking for fenv_t.__control... no checking for fenv_t.__mxcsr... no checking C preprocessor flags for Fortran calling convention cfortran.h... -DgFortran (probed) checking if C externals constructed with cfortran.h work... yes checking how to run the C preprocessor... cpp checking for egrep -e... (cached) /usr/bin/grep -E checking for gcc options needed to detect all undeclared functions... none needed checking whether gcc is Clang... no checking whether pthreads work with "-pthread" and "-lpthread"... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes CC:gcc CFLAGS:-g -O2 -fopenmp -pthread LIBS:-lpthread checking for szlib library... suppressed checking for hdf5 library... suppressed checking for netcdf.h... yes checking for netcdf_meta.h... yes checking for library containing nc_open... -lnetcdf checking for library containing H5TS_mutex_lock... no checking for library containing H5dont_atexit... no checking for the UDUNITS2 library... suppressed checking for uuid/uuid.h extra include path... not found checking for uuid.h extra include path... not found checking for uuid.h extra include path... not found checking for the CMOR library... suppressed checking for the ECCODES library... suppressed checking for GRIB support... yes checking for CGRIBEX support... yes checking for SERVICE support... yes checking for EXTRA support... yes checking for IEG support... yes checking for FFTW3 support... checking for the PROJ library... suppressed checking for the CURL library... suppressed checking for MAGICS library... suppressed checking for XML2 library... suppressed checking for build a separate CDI library and link CDO to it... no checking for building an additional static CDO binary... no checking for HIRLAM extensions... no checking for pthread_join using gcc -pthread -lpthread... yes checking whether gcc is Clang... (cached) no checking for joinable pthread attribute... (cached) PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... (cached) no checking for PTHREAD_PRIO_INHERIT... (cached) yes CC:gcc CFLAGS:-g -O2 -fopenmp -pthread -pthread LIBS:-lpthread -lnetcdf -lpthread checking for fdb5 library... suppressed checking for szlib library... suppressed checking for netcdf.h... (cached) yes checking for library containing nc_open... (cached) -lnetcdf checking for nc-config... nc-config checking netcdf's OpenDAP support... yes checking netcdf's Zarr support... yes checking netcdf's nc2 support... yes checking netcdf's nc4 support... yes checking netcdf's nc4/hdf5 support... yes checking whether nc_inq_var_filter is declared... yes checking for library containing nc_inq_var_filter_ids... none required checking whether nc_inq_var_filter_ids is declared... yes checking for library containing ncaux_h5filterspec_parselist... none required checking whether ncaux_h5filterspec_parselist is declared... yes checking netcdf's nc4/szlib support... no checking for library containing H5TS_mutex_lock... (cached) no checking for library containing H5get_libversion... no checking for the ECCODES library... suppressed checking for GRIB support... yes checking for ACROSS support... yes checking for CGRIBEX support... yes checking for SERVICE support... yes checking for EXTRA support... yes checking for IEG support... yes checking for building an additional static CDI binary... no checking for HIRLAM extensions... no checking for gawk... (cached) mawk checking that generated files are newer than configure... done === configuring in libcdi (/home/system/install/met/cdo/cdo-2.5.3/libcdi) configure: running /bin/bash ./configure '--prefix=/usr/local' --disable-option-checking '--with-netcdf=yes' 'CPPFLAGS=-DCDI_SIZE_TYPE=size_t' '--srcdir=.' --cache-file=/dev/null checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '0' is supported by ustar format... yes checking whether GID '0' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether to enable maintainer-specific portions of Makefiles... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... gcc3 checking For conformance to POSIX.1-2001.... yes checking for C/C++ restrict keyword... __restrict__ configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/param.h... yes checking for dlfcn.h... yes checking any compiler has problems building shared objects... no checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for the compiler family... other configure: creating ./config.lt config.lt: creating libtool checking whether libtool can link C programs... yes checking whether byte ordering is bigendian... no checking for gcc option to enable large file support... -D_FILE_OFFSET_BITS=64 checking for getpagesize... yes checking for working mmap... yes checking for struct stat.st_blksize... yes checking for malloc.h... yes checking for sys/time.h... yes checking for execinfo.h... yes checking size parameter type for backtrace()... int checking for library containing backtrace... none required checking for mallinfo... yes checking for pwrite... yes checking for timegm... yes checking for getline... yes checking for gcc options needed to detect all undeclared functions... none needed checking for uuid/uuid.h extra include path... not found checking for uuid.h extra include path... not found checking for uuid.h extra include path... not found checking whether isnan is declared... yes checking whether _SC_LARGE_PAGESIZE is declared... no checking whether PAGESIZE is declared... no checking whether PAGE_SIZE is declared... no checking whether _SC_PAGE_SIZE is declared... yes checking whether _SC_PAGESIZE is declared... yes checking whether _PC_REC_XFER_ALIGN is declared... yes checking whether POSIX_REC_XFER_ALIGN is declared... no checking for library containing floor... -lm checking whether __builtin_ctz is declared... yes checking how to run the C preprocessor... gcc -E checking for egrep -e... (cached) /usr/bin/grep -E checking whether gcc is Clang... no checking whether pthreads work with "-pthread" and "-lpthread"... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes CC:gcc CFLAGS:-g -O2 -pthread LIBS:-lpthread -lm checking for fdb5 library... suppressed checking for szlib library... suppressed checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking for nc-config... nc-config checking netcdf's OpenDAP support... yes checking netcdf's Zarr support... yes checking netcdf's nc2 support... yes checking netcdf's nc4 support... yes checking netcdf's nc4/hdf5 support... yes checking whether nc_inq_var_filter is declared... yes checking for library containing nc_inq_var_filter_ids... none required checking whether nc_inq_var_filter_ids is declared... yes checking for library containing ncaux_h5filterspec_parselist... none required checking whether ncaux_h5filterspec_parselist is declared... yes checking netcdf's nc4/szlib support... no checking for library containing H5TS_mutex_lock... no checking for library containing H5get_libversion... no checking for the ECCODES library... suppressed checking for GRIB support... yes checking for ACROSS support... yes checking for CGRIBEX support... yes checking for SERVICE support... yes checking for EXTRA support... yes checking for IEG support... yes checking for building an additional static CDI binary... no checking for HIRLAM extensions... no checking for grib_get_length... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating app/Makefile config.status: creating cdi.settings config.status: creating examples/Makefile config.status: creating examples/pio/Makefile config.status: creating interfaces/Makefile config.status: creating interfaces/python/Makefile config.status: creating src/Makefile config.status: creating src/cmake/cdi/cdi-config-version.cmake config.status: creating src/cmake/cdi/cdi-config.cmake config.status: creating src/pkgconfig/cdi.pc config.status: creating src/pkgconfig/cdi_f2003.pc config.status: creating src/pkgconfig/cdipio.pc config.status: creating tests/Makefile config.status: creating tests/test_cksum_base config.status: creating interfaces/test_cpp_nc.run config.status: creating interfaces/test_python_grb.run config.status: creating interfaces/test_python_nc.run config.status: creating interfaces/test_ruby_grb.run config.status: creating interfaces/test_ruby_nc.run config.status: creating tables/gen_tableheaderfile config.status: creating tests/pio_cksum_asynch.run config.status: creating tests/pio_cksum_fpguard.run config.status: creating tests/pio_cksum_grb2.run config.status: creating tests/pio_cksum_mpi_fw_at_all.run config.status: creating tests/pio_cksum_mpi_fw_at_reblock.run config.status: creating tests/pio_cksum_mpi_fw_ordered.run config.status: creating tests/pio_cksum_mpinonb.run config.status: creating tests/pio_cksum_nc.run config.status: creating tests/pio_cksum_nc2.run config.status: creating tests/pio_cksum_nc4.run config.status: creating tests/pio_cksum_writer.run config.status: creating tests/pio_write.parallel.run config.status: creating tests/pio_write.run config.status: creating tests/pio_write_deco2d.parallel.run config.status: creating tests/pio_write_deco2d.run config.status: creating tests/pio_write_dist_array.run config.status: creating tests/test_byteswap.run config.status: creating tests/test_cdf_const.run config.status: creating tests/test_cdf_transformation.run config.status: creating tests/test_cksum_ext.run config.status: creating tests/test_cksum_grb.run config.status: creating tests/test_cksum_grb2.run config.status: creating tests/test_cksum_ieg.run config.status: creating tests/test_cksum_nc.run config.status: creating tests/test_cksum_nc2.run config.status: creating tests/test_cksum_nc4.run config.status: creating tests/test_cksum_nc_chunk.run config.status: creating tests/test_cksum_srv.run config.status: creating tests/test_f2003.run config.status: creating tests/test_grib.run config.status: creating tests/test_resource_copy.parallel.run config.status: creating tests/test_resource_copy.run config.status: creating tests/test_table.run config.status: creating src/config.h config.status: src/config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands configure: CDI is configured with the following options: { "build" : { "tools" : { "CC" : "gcc", "CPP" : "gcc -E", "CPPFLAGS" : "-DCDI_SIZE_TYPE=size_t", "CFLAGS" : "-g -O2 -pthread", "LDFLAGS" : "", "LIBS" : "-lnetcdf -lpthread -lm ", "FC" : "no", "F77" : "no", "FCFLAGS" : "", "LD" : "/usr/bin/ld", "NM" : "/usr/bin/nm -B", "AR" : "ar", "DLLTOOL" : "false", "OBJDUMP" : "objdump", "STRIP" : "strip", "RANLIB" : "ranlib", "INSTALL" : "/usr/bin/install -c" }, "libraries" : { "threads" : { "lib" : "", "include" : "" }, "mpi" : { "libs" : "", "cflags" : "", "fclibs" : "", "fcflags" : "" }, "fdb5" : { "lib" : "", "include" : "" }, "szlib" : { "lib" : "", "include" : "" }, "netcdf" : { "lib" : " -lnetcdf", "include" : "" }, "eccodes" : { "lib" : "", "include" : "" } }, "platform" : { "SYSTEM_TYPE" : "i686-pc-linux-gnu" } }, "features" : { "enable_cdi_lib" : false, "grib" : "yes", "cgribex" : "yes", "service" : "yes", "extra" : "yes", "ieg" : "yes", "enable_mpi" : false, "parallel_nc4" : 0, "enable_python" : false, "enable_ruby" : false, "across" : "yes" } } configure: Configuration completed. You can now run 'make' to compile the CDI package and 'make install' to install it afterwards. configure: creating ./config.status config.status: creating test/cdoTestFunctions.test config.status: creating test/pytest/cdoTest.py config.status: creating test/pytest/CDO_test.py.test config.status: creating test/pytest/Adisit.py.test config.status: creating test/pytest/Afterburner.py.test config.status: creating test/pytest/Arith.py.test config.status: creating test/pytest/Arithc.py.test config.status: creating test/pytest/Arith_extra.py.test config.status: creating test/pytest/Cat.py.test config.status: creating test/pytest/Change.py.test config.status: creating test/pytest/CMOR.py.test config.status: creating test/pytest/Collgrid.py.test config.status: creating test/pytest/Comp.py.test config.status: creating test/pytest/Compc.py.test config.status: creating test/pytest/Cond.py.test config.status: creating test/pytest/Cond2.py.test config.status: creating test/pytest/Condc.py.test config.status: creating test/pytest/Consecstat.py.test config.status: creating test/pytest/Copy_netcdf.py.test config.status: creating test/pytest/Dayarith.py.test config.status: creating test/pytest/Detrend.py.test config.status: creating test/pytest/Eca.py.test config.status: creating test/pytest/Enspctl.py.test config.status: creating test/pytest/Ensstat.py.test config.status: creating test/pytest/Ensstat2.py.test config.status: creating test/pytest/EOFcoeff.py.test config.status: creating test/pytest/EOF.py.test config.status: creating test/pytest/Etccdi.py.test config.status: creating test/pytest/Etccdi2.py.test config.status: creating test/pytest/Expr.py.test config.status: creating test/pytest/File.py.test config.status: creating test/pytest/Filter.py.test config.status: creating test/pytest/Fldpctl.py.test config.status: creating test/pytest/Fldstat2.py.test config.status: creating test/pytest/Fldstat.py.test config.status: creating test/pytest/Genweights.py.test config.status: creating test/pytest/Gradsdes.py.test config.status: creating test/pytest/Gridarea.py.test config.status: creating test/pytest/Gridboxstat.py.test config.status: creating test/pytest/Importcmsaf.py.test config.status: creating test/pytest/Intgrid.py.test config.status: creating test/pytest/Inttime.py.test config.status: creating test/pytest/Intyear.py.test config.status: creating test/pytest/Isosurface.py.test config.status: creating test/pytest/Maggraph.py.test config.status: creating test/pytest/Magplot.py.test config.status: creating test/pytest/Magvector.py.test config.status: creating test/pytest/MapReduce.py.test config.status: creating test/pytest/Maskregion.py.test config.status: creating test/pytest/Math.py.test config.status: creating test/pytest/Merge.py.test config.status: creating test/pytest/Mergetime.py.test config.status: creating test/pytest/Merstat.py.test config.status: creating test/pytest/Monarith.py.test config.status: creating test/pytest/Multiyearstat.py.test config.status: creating test/pytest/Ninfo.py.test config.status: creating test/pytest/Pack.py.test config.status: creating test/pytest/Percentile.py.test config.status: creating test/pytest/Read_grib.py.test config.status: creating test/pytest/Read_netcdf.py.test config.status: creating test/pytest/Remap.py.test config.status: creating test/pytest/Remap_noweights.py.test config.status: creating test/pytest/Remap2.py.test config.status: creating test/pytest/Remap3.py.test config.status: creating test/pytest/Remap4.py.test config.status: creating test/pytest/Remap_global_5_grid.py.test config.status: creating test/pytest/Remap_gme.py.test config.status: creating test/pytest/Remap_healpix.py.test config.status: creating test/pytest/Remap_small.py.test config.status: creating test/pytest/Remap_knn.py.test config.status: creating test/pytest/Remap_extra.py.test config.status: creating test/pytest/Remap_extra_file.py.test config.status: creating test/pytest/Remap_extra_file2.py.test config.status: creating test/pytest/Remapeta.py.test config.status: creating test/pytest/Remapstat.py.test config.status: creating test/pytest/Runpctl.py.test config.status: creating test/pytest/Seasstat.py.test config.status: creating test/pytest/Runstat.py.test config.status: creating test/pytest/Select.py.test config.status: creating test/pytest/Selregion.py.test config.status: creating test/pytest/Setmiss.py.test config.status: creating test/pytest/Smooth.py.test config.status: creating test/pytest/Spectral.py.test config.status: creating test/pytest/Split.py.test config.status: creating test/pytest/Splittime.py.test config.status: creating test/pytest/threads.py.test config.status: creating test/pytest/Timfillmiss.py.test config.status: creating test/pytest/Timpctl.py.test config.status: creating test/pytest/Timselpctl.py.test config.status: creating test/pytest/Timselstat.py.test config.status: creating test/pytest/Timstat2.py.test config.status: creating test/pytest/Timstat3.py.test config.status: creating test/pytest/Timstat.py.test config.status: creating test/pytest/tsformat.py.test config.status: creating test/pytest/userInput.py.test config.status: creating test/pytest/Varsstat.py.test config.status: creating test/pytest/Vertfillmiss.py.test config.status: creating test/pytest/Vertint.py.test config.status: creating test/pytest/Vertstat.py.test config.status: creating test/pytest/wildcard.py.test config.status: creating test/pytest/cdoReturnValues.py.test config.status: creating test/pytest/Wind.py.test config.status: creating test/pytest/Ydayarith.py.test config.status: creating test/pytest/Ydrunpctl.py.test config.status: creating test/pytest/Ydrunstat.py.test config.status: creating test/pytest/Yeararith.py.test config.status: creating test/pytest/Yearmonstat.py.test config.status: creating test/pytest/Ymonarith.py.test config.status: creating test/pytest/Zonstat.py.test config.status: creating test/pytest/Vargen.py.test config.status: creating test/executeOnly/Splitsel.test config.status: creating contrib/Makefile config.status: creating cdo.spec config.status: creating cdo.settings config.status: creating Makefile config.status: creating src/lib/ncl/Makefile config.status: creating src/lib/yac/src/Makefile config.status: creating src/lib/gradsdes/Makefile config.status: creating src/lib/healpix/Makefile config.status: creating src/Makefile config.status: creating src/lib/yac/clapack/Makefile config.status: creating test/data/Makefile config.status: creating test/executeOnly/Makefile config.status: creating test/pytest/Makefile config.status: creating src/config.h config.status: src/config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands configure: CDO is configured with the following options: { "build" : { "tools" : { "CXX" : "g++ -std=gnu++20", "CC" : "gcc", "CPP" : "cpp", "CPPFLAGS" : "-DgFortran -DCDI_SIZE_TYPE=size_t", "CXXFLAGS" : "-g -O2 -fopenmp -pthread", "CFLAGS" : "-g -O2 -fopenmp -pthread -pthread", "F77" : "g77", "FFLAGS" : "-g -O2", "LDFLAGS" : "", "LIBS" : "-lnetcdf -lpthread -lnetcdf -lpthread ", "FCFLAGS" : "@FCFLAGS@", "INCLUDES" : "@INCLUDES@", "LD" : "/usr/bin/ld", "NM" : "/usr/bin/nm -B", "AR" : "ar", "AS" : "as", "DLLTOOL" : "false", "OBJDUMP" : "objdump", "STRIP" : "strip", "RANLIB" : "ranlib", "INSTALL" : "/usr/bin/install -c", }, "libraries" : { "threads" : { "lib" : "", "include" : "" }, "szlib" : { "lib" : "", "include" : "" }, "hdf5" : { "lib" : "", "include" : "" }, "netcdf" : { "lib" : " -lnetcdf", "include" : "" }, "udunits2" : { "lib" : "", "include" : "" }, "proj" : { "lib" : "", "include" : "" }, "magics" : { "lib" : "", "include" : "" } }, "platform" : { "SYSTEM_TYPE" : "i686-pc-linux-gnu" }, }, "features" : { "enable_cdi_lib" : false, "enable_fortran" : true, "fortran_works" : "yes", } } configure: Configuration completed. You can now say 'make' to compile the CDO package and 'make install' to install it afterwards.